Contig 009899:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS148H01+                                                    AAAAAACATACACATGCTA
                      ____________________________________________________________
consensus                                                      AAAAAACATACACATGCTA
 
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JMFS148H01+           TATATTTAATTATCTTTCAAATCTGATTTAGATACATAATTTGTATGCATAGGCACAGAA
                      ____________________________________________________________
consensus             TATATTTAATTATCTTTCAAATCTGATTTAGATACATAATTTGTATGCATAGGCACAGAA
 
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JMFS148H01+           TTTCACAAGACACAAAATTCATAATATCACACAAGTCATAATACCGGCAACACCAGCATT
                      ____________________________________________________________
consensus             TTTCACAAGACACAAAATTCATAATATCACACAAGTCATAATACCGGCAACACCAGCATT
 
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JMFS148H01+           GCCAATCATTCCTCCTACACCCAAGGCAATCGATGCCAATTGATATTTCGTGCTATTTCT
                      ____________________________________________________________
consensus             GCCAATCATTCCTCCTACACCCAAGGCAATCGATGCCAATTGATATTTCGTGCTATTTCT
 
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JMFS110D06+                    CTGAGTAACCAAAGCTGTATGGATGCACTCTTCTGTCTTCTTTTTAAAGTC
JMFS148H01+           GTTAGCCATCTGAGTAACCAAAGCTGTATGGATGCACTCTTCTGTCTTCTTTTTAAAGTC
rJMSF007J23-                   CTGAGTAACCAAAGCTGTATGGATGCACTCTTCTGTCTTCTTTTTAAAGTC
                      ____________________________________________________________
consensus             GTTAGCCATCTGAGTAACCAAAGCTGTATGGATGCACTCTTCTGTCTTCTTTTTAAAGTC
 
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JMFS110D06+           TTCCCAAATAGACTTGCACTGGAGAGGTGTTATCAACGTTTTTGATGCAGGAACCTTATC
JMFS148H01+           TTCCCAAATAGACTTGCACTGGAGAGGTGTTATCAACGTTTTTGATGCAGGAACCTTATC
rJMSF007J23-          TTCCCAAATAGACTTGCACTGGAGAGGTGTTATCAACGTTTTTGATGCAGGAACCTTATC
                      ____________________________________________________________
consensus             TTCCCAAATAGACTTGCACTGGAGAGGTGTTATCAACGTTTTTGATGCAGGAACCTTATC
 
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JMFS110D06+           CCAAGAGCTTGATGGTAGAGAGTCAGGTGACGGGCTTTCGATTAAAGCATCCAAAAGGAT
JMFS148H01+           CCAAGAGCTTGATGGTAGAGAGTCAGGTGACGGGCTTTCGATTAAAGCATCCAAAAGGAT
rJMSF007J23-          CCAAGAGCTTGATGGTAGAGAGTCAGGTGACGGGCTTTCGATTAAAGCATCCAAAAGGAT
                      ____________________________________________________________
consensus             CCAAGAGCTTGATGGTAGAGAGTCAGGTGACGGGCTTTCGATTAAAGCATCCAAAAGGAT
 
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JMFS110D06+           CTTTCCAATATTGTCAGTTTCTTCCTCCAAGCGAATAGCAGCCATAACTGAGAGTATTTC
JMFS148H01+           CTTTCCAATATTGTCAGTTTCTTCCTCCAAGCGAATAGCAGCCATAACTGAGAGTATTTC
rJMSF007J23-          CTTTCCAATATTGTCAGTTTCTTCCTCCAAGCGAATAGCAGCCATAACTGAGAGTATTTC
                      ____________________________________________________________
consensus             CTTTCCAATATTGTCAGTTTCTTCCTCCAAGCGAATAGCAGCCATAACTGAGAGTATTTC
 
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JMFS110D06+           GAGAGAAGATGA                                                
JMFS148H01+           GAGAGAAGATGAACGTGCACGTTTGGCAATTGCTTTGATTATTTTCCCCCCTGTATGAGT
rJMSF007J23-          GAGAGAAGATGAACGTGCACGTTTGGCAATTGCTTTGATTATTTTCCCCCCTGTATGAGT
                      ____________________________________________________________
consensus             GAGAGAAGATGAACGTGCACGTTTGGCAATTGCTTTGATTATTTTCCCCCCTGTATGAGT
 
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JMFS148H01+           TTGATAGGAATCTTTGAAAAATTCTTCTTTAAACCTTCCTATCATACGGTGCAAAACCAT
rJMSF007J23-          TTGATAGGAATCTTTGAAAAATTCTTCTTTAAACCTTCCTATCATACGGTGCAAAACCAT
                      ____________________________________________________________
consensus             TTGATAGGAATCTTTGAAAAATTCTTCTTTAAACCTTCCTATCATACGGTGCAAAACCAT
 
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JMFS148H01+           TCCAACATCTTTTTTT                                            
rJMSF007J23-          TCCAACATCTTTTTTTGCCTTTGTTTCGACTACCTCTCTTGCATAATCCTTCAACTTTGA
                      ____________________________________________________________
consensus             TCCAACATCTTTTTTTGCCTTTGTTTCGACTACCTCTCTTGCATAATCCTTCAACTTTGA
 
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rJMSF007J23-          AAGCATATTATCTTTGGTTTTTTCATCCATCTCAAAGCCAGAGAGTGCTGCAGGAAAAGA
                      ____________________________________________________________
consensus             AAGCATATTATCTTTGGTTTTTTCATCCATCTCAAAGCCAGAGAGTGCTGCAGGAAAAGA
 
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rJMSF007J23-          TGATACTGCATCTTTTGTCTCACGCCGTAGGAGTTTTCTTATTTCTGGCCATGTATTATC
                      ____________________________________________________________
consensus             TGATACTGCATCTTTTGTCTCACGCCGTAGGAGTTTTCTTATTTCTGGCCATGTATTATC
 
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rJMSF007J23-          TCCAGCTGTATCTAATAGAGACCCAACCTTTTTAAATAGTGCATCATTCAACTTTGTCTT
                      ____________________________________________________________
consensus             TCCAGCTGTATCTAATAGAGACCCAACCTTTTTAAATAGTGCATCATTCAACTTTGTCTT