| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013A16 | Sequence | 534 | 009376 (6) | ref|XP_009609494.1| | 4e-39 | PREDICTED: lysophospholipid acyltransferase LPEAT2 [Nicotiana tomentosiformis] | 749 | 009896 (5) | emb|CDP08913.1| | 5e-71 | unnamed protein product [Coffea canephora] |
| JMFF033D02 | Sequence | 491 | 009376 (6) | ref|XP_009609494.1| | 6e-33 | PREDICTED: lysophospholipid acyltransferase LPEAT2 [Nicotiana tomentosiformis] | 773 | 009896 (5) | dbj|BAO02529.1| | 4e-96 | predicted Ca2+-binding protein Sucrose transporter protein ortholog [Nicotiana |
| JMSF007C05 | Sequence | 298 | 009376 (6) | ref|XP_004229866.1| | 3e-07 | PREDICTED: lysophospholipid acyltransferase LPEAT2 [Solanum lycopersicum] | 783 | 009896 (5) | dbj|BAO02529.1| | 2e-82 | predicted Ca2+-binding protein Sucrose transporter protein ortholog [Nicotiana |
| JMSF012J08 | Sequence | 260 | 009376 (6) | 793 | 009896 (5) | dbj|BAO02529.1| | 6e-87 | predicted Ca2+-binding protein Sucrose transporter protein ortholog [Nicotiana | |||
| JMSF027L01 | Sequence | 695 | 009376 (6) | ref|XP_006339501.1| | 2e-78 | PREDICTED: lysophospholipid acyltransferase LPEAT2-like [Solanum tuberosum] | 714 | 009896 (5) | dbj|BAO02529.1| | 2e-60 | predicted Ca2+-binding protein Sucrose transporter protein ortholog [Nicotiana |
This contig is upended
. : . : . : . : . : . :
rJMFF033D02+ TTGAGAATCA
____________________________________________________________
consensus TTGAGAATCA
. : . : . : . : . : . :
rJMFF033D02+ AAAGGAAAATGCTGTTCATTTTGCTAAGAGGACTAGCCATGCCATTGCTAGTTCTCTGAA
rJMSF012J08+ TTTGNTAAGAGGACTAGCCATGCCATTGCTAGTTCTNTGAA
rJMFF013A16+ TGAA
rJMSF007C05+ TGAA
____________________________________________________________
consensus AAAGGAAAATGCTGTTCATTTTGCTAAGAGGACTAGCCATGCCATTGCTAGTTCTCTGAA
. : . : . : . : . : . :
rJMFF033D02+ TGTTGTACAAACATCACA-TTCTTATGCCGATGCCTTGCTTCTTATGAAGGCTGCTGATT
rJMSF027L01+ TACAAACATCACA-TTCTTATGCCGATGCCTTGCTTCTTATGAAGGCTGCTGATT
rJMSF012J08+ TGTTGTACAAACATCACA-TTCTTATGCCGATGCCTTGCTTCTTATGAAGGCTGCTGATT
rJMFF013A16+ TGTTGTACAAACATCACATTTCTTATGCCGATGCCTTGCTTCTTATGAAGGCTGCTGATT
rJMSF007C05+ TGNTGTACAAACATCACA-TTCTTATGCCGATGCCTTGCTTCTTATGAAGGCTGCTGATT
____________________________________________________________
consensus TGTTGTACAAACATCACA-TTCTTATGCCGATGCCTTGCTTCTTATGAAGGCTGCTGATT
. : . : . : . : . : . :
rJMFF033D02+ CCAACAAGGAAAACCCCTC--CCTGTATATGACTGAAATGGCATGGGTTAAGTCGGCCTT
rJMSF027L01+ CCAACAAGGAAAACCCCTC--CCTGTATATGACTGAAATGGCATGGGTTAAGTCGGCCTT
rJMSF012J08+ CCAACAAGGAAAACCCCTC--CCTGTATATGACTGAAATGGCATGGGTTAAGTCGGCCTT
rJMFF013A16+ CCAACAAGGAAAACCCCTCCCCCTGTATATGACTGAAATGGCATGGGTTAAGTCGGCCTT
rJMSF007C05+ CCAACAAGGAAAACCCCTC--CCTGTATATGACTGAAATGGCATGGGTTAAGTCGGCCTT
____________________________________________________________
consensus CCAACAAGGAAAACCCCTC--CCTGTATATGACTGAAATGGCATGGGTTAAGTCGGCCTT
. : . : . : . : . : . :
rJMFF033D02+ TAATGTGAGCTCTTTAGAGGCTATGGACTTTCTGGATGTTTTCCTTTCCATGAACCCCGA
rJMSF027L01+ TAATGTGAGCTCTTTAGAGGCTATGGACTTTCTGGATGTTTTCCTTTCCATGAACCCCGA
rJMSF012J08+ TAATGTGAGCTCTTTAGAGGCTATGGACTTTCTGGATGTTTTCCTTTCCATGAACCCCGA
rJMFF013A16+ TAATGTGAGCTCTTTAGAGGCTATGGACTTTCTGGATGTTTTCCTTTCCATGAACCCCGA
rJMSF007C05+ TAATGTGAGCTCTTTAGAGGCTATGGACTTTCTGGATGTTTTCCTTTCCATGAACCCCGA
____________________________________________________________
consensus TAATGTGAGCTCTTTAGAGGCTATGGACTTTCTGGATGTTTTCCTTTCCATGAACCCCGA
. : . : . : . : . : . :
rJMFF033D02+ CTCCAGGGGACAAGTTAAAATACACGACTTCCTCAGGGTTCTAAGACTCAAGCCGTGTGC
rJMSF027L01+ CTCCAGGGGACAAGTTAAAATACACGACTTCCTCAGGGTTCTAAGACTCAAGCCGTGTGC
rJMSF012J08+ CTCCAGGGGACAAGTTAAAATACACGACTTCCTCAGGGTTCTAAGACTCAAGCCGTGTGC
rJMFF013A16+ CTCCAGGGGACAAGTTAAAATACACGACTTCCTCAGGGTTCTAAGACTCAAGCCGTGTGC
rJMSF007C05+ CTCCAGGGGACAAGTTAAAATACACGACTTCCTCAGGGTTCTAAGACTCAAGCCGTGTGC
____________________________________________________________
consensus CTCCAGGGGACAAGTTAAAATACACGACTTCCTCAGGGTTCTAAGACTCAAGCCGTGTGC
. : . : . : . : . : . :
rJMFF033D02+ TCTTTCTGAAAAGATATTCCAATTTGTTGATGTGCAAAAGAACGGGCGAATTACTTTCAA
rJMSF027L01+ TCTTTCTGAAAAGATATTCCAATTTGTTGATGTGCAAAAGAACGGGCGAATTACTTTCAA
rJMSF012J08+ TCTTTCTGAAAAGACATTCCAATTTGTTGATGTGCAAAAGAACGGGCGAATTACTTTCAA
rJMFF013A16+ TCTTTCTGAAAAGATATTCCAATTTGTTGATGTGCAAAAGAACGGGCGAATTACTTTCAA
rJMSF007C05+ TCTTTCTGAAAAGATATTCCAATTTGTTGATGTGCAAAAGAACGGGCGAATTACTTTTAA
____________________________________________________________
consensus TCTTTCTGAAAAGATATTCCAATTTGTTGATGTGCAAAAGAACGGGCGAATTACTTTCAA
. : . : . : . : . : . :
rJMFF033D02+ ACAGTTCTTGGTTGCATCAGTTCACATTCTGAACCAGCCATCATTTTCCCGAGCCTGTGA
rJMSF027L01+ ACAGTTCTTGGTTGCATCAGTTCACATTCTGAACCAGCCATCATTTTCCCGAGCCTGTGA
rJMSF012J08+ ACAGTTCTTGGTTGCATCAGTTCACATTCTGAACCAGCCATCATTTTCCCGAGCCTGTGA
rJMFF013A16+ ACAGTTCTTGGTTGCATCAGTTCACATTCTGAACCAGCCATCATTTTCCCGAGCCTGTGA
rJMSF007C05+ ACAGTTCTTGGTTGCATCAGTTCACATTCTGAACCAGCCATCATTTTCCCGAGCCTGTGA
____________________________________________________________
consensus ACAGTTCTTGGTTGCATCAGTTCACATTCTGAACCAGCCATCATTTTCCCGAGCCTGTGA
. : . : . : . : . : . :
rJMFF033D02+ ATTGGCATTCGAGAAATGTGATTCTAATAGGAAACATTACATTCTGGAGCAAGAGTTGGA
rJMSF027L01+ ATTGGCATTCGAGAAATGTGATTCTAATAGGAAACATTACATTCTGGAGCAAGAGTTGGA
rJMSF012J08+ ATTGGCATTCGAGAAATGTGATTCTAATAGGAAACATTACATTCTGGAGCAAGAGTTGGA
rJMFF013A16+ ATTGGCATTCGAGAAATGTGATTCTAATAGGAAACATTACATTCTGGAGCAAGAGTTGGA
rJMSF007C05+ ATTGGCATTCGAGAAATGTGATTCTAATAGGAAACATTACATTCTGGAGCAAGAGTTGGA
____________________________________________________________
consensus ATTGGCATTCGAGAAATGTGATTCTAATAGGAAACATTACATTCTGGAGCAAGAGTTGGA
. : . : . : . : . : . :
rJMFF033D02+ AGAATCTCTTACGCTATCAATCCCGAATCTGAGCAAGGACGAGATCCATGATCTCTTTAA
rJMSF027L01+ AGAATCTCTTACGCTATCAAT--CAAATCTGAGCAAGGACGAGATCCATGATCTCTTTAA
rJMSF012J08+ AGAATCTCTTACGCTATCAATCCCGAATCTGAGCAAGGACGAGATCCATGATCTCTTTAA
rJMFF013A16+ AGAATCTCTTACGCTATCAATCCCGAATCTGAGCAAGGACGAGATCCATGATCTCTTTAA
rJMSF007C05+ AGAATCTCTTACGCTATCAATCCCGAATCTGAGCAAGGACGAGATCCATGATCTCTTTAA
____________________________________________________________
consensus AGAATCTCTTACGCTATCAATCCCGAATCTGAGCAAGGACGAGATCCATGATCTCTTTAA
. : . : . : . : . : . :
rJMFF033D02+ CTTGCTCGATGCCAATCACGACGGGAGGATCTCCCGTGAAGATTTCATTCCCGGTTTAAG
rJMSF027L01+ CTTGCTCGATGCCAATCACGACGGGAGGATCTCCCGTGAAGATTTCATTCCCGGTTTAAG
rJMSF012J08+ CTTGCTCGATGCCAATCACGACGGGAGGATCTCCCGTGAAGATTTCATTCCCGGTTTAAG
rJMFF013A16+ CTTGCTCGATGCCAATCACGACGGGAGGATCTCCCGTGAAGATTTCATTCCCGGTTTAAG
rJMSF007C05+ CTTGCTCGATGCCAATCACGACGGGAGGATCTCCCGTGAAGATTTCATTCCCGGTTTAAG
____________________________________________________________
consensus CTTGCTCGATGCCAATCACGACGGGAGGATCTCCCGTGAAGATTTCATTCCCGGTTTAAG
. : . : . : . : . : . :
rJMFF033D02+ AAGAAACCCATTGTTGATAGCGCTTTTCGTCCCAAAATTGTTAAATGAGAACTTGTCTGG
rJMSF027L01+ AAGAAACCCATTGTTGATAGCGCTTTTCGTCCCAAAATTGTTAAATGAGAACTTGTCTGG
rJMSF012J08+ AAGAAACCCATTGTTGATAGCGCTTTTCGTCCCAAAATTGTTAAATGAGAACTTGTCTGG
rJMFF013A16+ AAGAAACCCATTGTTGATAGCGCTTTTCGTCCCAAAATTGTTAAATGAGAACTTGTCTGG
rJMSF007C05+ AAGAAACCCATTGTTGATAGCGCTTTTCGTCCCAAAATTGTTAAATGAGAACTTGTCTGG
____________________________________________________________
consensus AAGAAACCCATTGTTGATAGCGCTTTTCGTCCCAAAATTGTTAAATGAGAACTTGTCTGG
. : . : . : . : . : . :
rJMFF033D02+ AGCAGAAGAACATGTACTGGTAGAGATATTATGACCTAAGTTTTGATTGCCATAGAAGAA
rJMSF027L01+ AGCAGAAGAACATGTACTGGTAGAGATATTATGACCTAAGTTTTGATTGCCATAGAAGAA
rJMSF012J08+ AGCAGAAGAACATGTACTGGTAGAGATATTATGACCTAAGTTTTGATTGCCATAGAAGAA
rJMFF013A16+ AGCAGAAGAACATGTACTGGTAGAGATATTATGACCTAAGTTTTGATTGCCATAGAAGAA
rJMSF007C05+ AGCAGAAGAACATGTACTGGTAGAGATATTATGACCTAAGTTTTGATTGCCATAGAAGAA
____________________________________________________________
consensus AGCAGAAGAACATGTACTGGTAGAGATATTATGACCTAAGTTTTGATTGCCATAGAAGAA
. : . : . : . : . : . :
rJMFF033D02+ AGAACTCACATATGATCAGTACCTTGAGAGAGATGTAT
rJMSF027L01+ AGAACTCACATATGATCAGTACCTTGAGAGAGATGTATTGAGGCAATGAGGGGCCATATA
rJMSF012J08+ AGAACTCACATATGATCAGTACCTTGAGAGAGATGTATTGAGGCAATGAGGGGCCATATA
rJMFF013A16+ AGAACTCACATATGATCAGTACCTTGAGAGAGATGTATTGAGGCAATGAGGGGCCATATA
rJMSF007C05+ AGAACTCACATATGATCAGTACCTTGAGAGAGATGTATTGAGGCAATGAGGGGCCATATA
____________________________________________________________
consensus AGAACTCACATATGATCAGTACCTTGAGAGAGATGTATTGAGGCAATGAGGGGCCATATA
. : . : . : . : . : . :
rJMSF027L01+ ATTT
rJMSF012J08+ ATTT
rJMFF013A16+ ATTT
rJMSF007C05+ ATTTTGGCATAAAATACTCATTTTGTGTGATGTGATTAAACTTTTATTCTTTTACAAAAT
____________________________________________________________
consensus ATTTTGGCATAAAATACTCATTTTGTGTGATGTGATTAAACTTTTATTCTTTTACAAAAT