Contig 009890:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN045K19-                            TACTACATTTAGAGGATAAGTGCAAGCGGGCAATTGAATGGGC
                      ____________________________________________________________
consensus                              TACTACATTTAGAGGATAAGTGCAAGCGGGCAATTGAATGGGC
 
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JMFN045K19-           CTTGAAGATTGAACCGTCTGTAAATCATTTGGTTGTATCTGGGGGCGTTGCATC-AAACC
rJMSF004E20+                           CTGTAAATCATTTGGTTGTGTCTGGGGGCGTTGCGTCGAAATC
                      ____________________________________________________________
consensus             CTTGAAGATTGAACCGTCTGTAAATCATTTGGTTGTGTCTGGGGGCGTTGCGTCGAAATC
 
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JMFN045K19-           AGTATGTCAGGGCTAGGCTTAACGAGGTTGTTAA-GAAGAACGGCCTGCAACTCGTGTGC
rJMSF004E20+          AGTATGTCAGGGCTAGGCTTAACGAGGTTGTTAANGAAGAACGGCCTGCAACTCGTGTGC
                      ____________________________________________________________
consensus             AGTATGTCAGGGCTAGGCTTAACGAGGTTGTTAANGAAGAACGGCCTGCAACTCGTGTGC
 
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JMFN045K19-           CCCCCTCCCAGCCTTTGCACCGACAACGGTGTGATGGTTGCTTGGACTGGCATTGAGCAT
rJMSF004E20+          CCCCCTCCCAGCCTTTGCACCGACAACGGTGTGATGGTTGCTTGGACTGGGATCGAGCAT
                      ____________________________________________________________
consensus             CCCCCTCCCAGCCTTTGCACCGACAACGGTGTGATGGTTGCTTGGACTGGGATTGAGCAT
 
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JMFN045K19-           TTCCTCGTGGGAAGATTTGATCCTCCACCTCCTGCAGATGAACCTGAAGATGCTCTGGTT
rJMSF004E20+          TTCCTCGTGGGAAGATTTGATCCTCCACCTCCTGCATATGAACCCGAAGATGCTATGATT
                      ____________________________________________________________
consensus             TTCCTCGTGGGAAGATTTGATCCTCCACCTCCTGCATATGAACCTGAAGATGCTCTGGTT
 
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JMFN045K19-           GATCTGCGCCCGAGGTGGCCGTTAGGCGAGGAGTATGCCGAGGGAAAAAGCGAAGCTCGC
rJMSF004E20+          GATCTGCGCCCGAGGTGGCCGTTAGGCGAGGAGTATGCCGAGGGAAAAAGCGAAGCTCGG
                      ____________________________________________________________
consensus             GATCTGCGCCCGAGGTGGCCGTTAGGCGAGGAGTATGCCGAGGGAAAAAGCGAAGCTCGG
 
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JMFN045K19-           TCATTGAAGACAGCCCGGGTTCATCCATCCCTTACATCTCTGATTCAGGCATCTAGGAAG
rJMSF004E20+          TCGTTGAAGACAGCCCGAGTTCATCCCTCCCTTACATCTCTGATTCAGGCATCTATGAAG
                      ____________________________________________________________
consensus             TCGTTGAAGACAGCCCGGGTTCATCCCTCCCTTACATCTCTGATTCAGGCATCTATGAAG
 
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JMFN045K19-           CAACAA                                                      
rJMSF004E20+          CAACAAGTCTAAGCTGCCATTTTCTGAAGCTTCTGTTCTTCTCATTCAAGAATATAACCC
                      ____________________________________________________________
consensus             CAACAAGTCTAAGCTGCCATTTTCTGAAGCTTCTGTTCTTCTCATTCAAGAATATAACCC
 
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rJMSF004E20+          ACAATCACTTCAAGAGTTGAATGCTTTCATGTGCTCAAAGCCTCAAACTGGAGAGTATCA
                      ____________________________________________________________
consensus             ACAATCACTTCAAGAGTTGAATGCTTTCATGTGCTCAAAGCCTCAAACTGGAGAGTATCA
 
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rJMSF004E20+          TGTTATTTATTACACAGCAAGCAAAATCTTCCAAGAAACCAAAATTTATTATCTCTGTGA
                      ____________________________________________________________
consensus             TGTTATTTATTACACAGCAAGCAAAATCTTCCAAGAAACCAAAATTTATTATCTCTGTGA
 
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rJMSF004E20+          AAAGCATATACCATTTAGATTTTAGAGTGTCTATATAGAACATTTATAGTACCCCAAACT
                      ____________________________________________________________
consensus             AAAGCATATACCATTTAGATTTTAGAGTGTCTATATAGAACATTTATAGTACCCCAAACT