Contig 009888:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020O06+                                                GCAAGAATCCTTTGGNTTTCAA
rJMSF003P20+                                                GCAAGAATCCTTTGGNTTTCAA
                      ____________________________________________________________
consensus                                                   GCAAGAATCCTTTGGNTTTCAA
 
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rJMSF020O06+          CCTTNTGACCGAGGGANGGAANGGCAGCCCCAANCCCGCCTNATNCCCNACCGGNNTNCT
rJMSF003P20+          CCTTATGACCGNGGGANGGAANGGCAGCCCCAANCCCGCCTNATCCCCAACCGGNGTNCT
                      ____________________________________________________________
consensus             CCTTATGACCGAGGGANGGAANGGCAGCCCCAANCCCGCCTNATCCCCAACCGGNGTNCT
 
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rJMSF020O06+          NCAAAAGGNGGTTTTTTNCTNTNTTTNCAACAGCNGNGCAGGGNGCNGTNCNAGNGGCNA
rJMSF003P20+          ACAAAAGGNGGTTTTTTNCTNTNTTTCCAACAGCNGNGCAGGGNGCNGTNCNAGNGGCAA
                      ____________________________________________________________
consensus             ACAAAAGGNGGTTTTTTNCTNTNTTTCCAACAGCNGNGCAGGGNGCNGTNCNAGNGGCAA
 
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rJMSF020O06+          GNGCAACAAGAACNCCAACGGGGCCNGTCCTTGTAAAGNGATTTTTGGNGCAANTTTCAT
rJMSF003P20+          GAGCAACNGGAACNCCAACGGGGCCNGTCCTTGTAACGNGATTTTTGGNGCAANTTTCAT
                      ____________________________________________________________
consensus             GAGCAACAGGAACNCCAACGGGGCCNGTCCTTGTAACGNGATTTTTGGNGCAANTTTCAT
 
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rJMSF020O06+          GAACCCCTCCCTGCCCGNTNTGTAACCNCCCCNCCTCAATNCNAGATACTAGGTAANGCA
rJMSF003P20+          GAACCCCTCCCTGCCCGNTNTGTAACCNCCCCNCCTCAATCCAAGATACTAGGTAATGCA
                      ____________________________________________________________
consensus             GAACCCCTCCCTGCCCGNTNTGTAACCNCCCCNCCTCAATCCAAGATACTAGGTAATGCA
 
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rJMSF020O06+          AGGNGTTNTTGGNNTAATNTAGTTTTCNTTTTCATCAANTTAAAAGATTTGTTTTTTTTT
rJMSF003P20+          AGGNGTTNTTGGNNTAATNTAGTTTTCATTTTCATCAANTTAAAAGATTTGTTTTTTTTT
                      ____________________________________________________________
consensus             AGGNGTTNTTGGNNTAATNTAGTTTTCATTTTCATCAANTTAAAAGATTTGTTTTTTTTT
 
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rJMSF020O06+          TTTTCTTTTCATATGTAATATCTTCAACAGTTTGAGCCCAGCTT                
rJMSF003P20+          TTTTCTTTTCATATGTAATGTCTTCAACAGTTTGAGCCCAGCTTGGGATTGTAGTGGCTA
                      ____________________________________________________________
consensus             TTTTCTTTTCATATGTAATGTCTTCAACAGTTTGAGCCCAGCTTGGGATTGTAGTGGCTA