Contig 009887:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003P05Sequence296002062 (2)ref|XP_009369320.1|6e-09PREDICTED: RAD50-interacting protein 1 [Pyrus x bretschneideri]184009887 (2)
JMSF038B18Sequence669002062 (2)gb|KDP31230.1|4e-73hypothetical protein JCGZ_11606 [Jatropha curcas]211009887 (2)

Alignment

This contig is upended


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rJMSF038B18+                               GGGGGAAANNATTNNAANAAAAGGGGGTNNTTTGGGNCC
                      ____________________________________________________________
consensus                                  GGGGGAAANNATTNNAANAAAAGGGGGTNNTTTGGGNCC
 
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rJMSF038B18+          CCCCNNAAAAAAAAAAAGAATATTTCAAAAATTACCTGGATAAGTCTTATGCCGCAGCAT
rJMSF003P05+                AAAAAAAAAAAGAATATTTCAAAAATTACCTGGATAAGTCTTATGCCGCAGCAT
                      ____________________________________________________________
consensus             CCCCNNAAAAAAAAAAAGAATATTTCAAAAATTACCTGGATAAGTCTTATGCCGCAGCAT
 
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rJMSF038B18+          NGCTCATNAAAAAGGTACAGCTTTCTCACCAANTAGTCTGCATNACCATCTTTCTGGAAA
rJMSF003P05+          TGCTCATAAAAAAGGTACAGCTTTCTCACCAATTAGTCTGCATTACCATATTTCTGGAAA
                      ____________________________________________________________
consensus             TGCTCATAAAAAAGGTACAGCTTTCTCACCAATTAGTCTGCATTACCATCTTTCTGGAAA
 
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rJMSF038B18+          TGATCAGNGTCTNTACTTAAACTACGATNTGAGATAATTGCAGCTTCTC           
rJMSF003P05+          TGATCAGAGTCTATACTTAAACTACGATTTGAGATAATTGCAGCTTCTCTTGATTAAATG
                      ____________________________________________________________
consensus             TGATCAGAGTCTATACTTAAACTACGATTTGAGATAATTGCAGCTTCTCTTGATTAAATG