| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003J02 | Sequence | 135 | 003530 (2) | 533 | 009884 (8) | gb|KDP46274.1| | 7e-29 | hypothetical protein JCGZ_10114 [Jatropha curcas] | |||
| JMSF012O09 | Sequence | 310 | 012182 (2) | ref|XP_010318754.1| | 1e-06 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101255783 [Solanum l | 762 | 009884 (8) | emb|CDP16697.1| | 6e-129 | unnamed protein product [Coffea canephora] |
| JMSF027K11 | Sequence | 676 | 009884 (8) | gb|KDP46274.1| | 2e-134 | hypothetical protein JCGZ_10114 [Jatropha curcas] | 759 | 009884 (8) | emb|CDP16697.1| | 5e-144 | unnamed protein product [Coffea canephora] |
| JMSF032K04 | Sequence | 720 | 009884 (8) | ref|XP_006435762.1| | 5e-145 | hypothetical protein CICLE_v10032088mg [Citrus clementina] ref|XP_006486301.1| P | 707 | 009884 (8) | emb|CDP16697.1| | 2e-136 | unnamed protein product [Coffea canephora] |
| JMSF044P01 | Sequence | 723 | 009884 (8) | ref|XP_006435762.1| | 5e-145 | hypothetical protein CICLE_v10032088mg [Citrus clementina] ref|XP_006486301.1| P | 760 | 009884 (8) | emb|CDP16697.1| | 1e-135 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF012O09- AGTGAACAACAAATCTACAACATAAGCAAGATTTCGTATGAAAA
____________________________________________________________
consensus AGTGAACAACAAATCTACAACATAAGCAAGATTTCGTATGAAAA
. : . : . : . : . : . :
rJMSF012O09- TTATACTTTATAGAAATAAATGAAAAACGTTACAGAAACTAGACAATATACGAATCATTT
rJMSF032K04- ATATACGAATCATTT
rJMSF027K11- ACGTTACAGAAACTAGACAATATACGAATCATTT
rJMSF044P01- ACGTTACAGAAACTAGACAATATACGAATCATTT
____________________________________________________________
consensus TTATACTTTATAGAAATAAATGAAAAACGTTACAGAAACTAGACAATATACGAATCATTT
. : . : . : . : . : . :
rJMSF012O09- TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
rJMSF032K04- TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
rJMSF027K11- TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
rJMSF044P01- TTTGTGCTTTTAGTTGACGTTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
____________________________________________________________
consensus TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
. : . : . : . : . : . :
rJMSF012O09- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
rJMSF032K04- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
rJMSF027K11- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
rJMSF044P01- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGTNTCAGGCTAGA
____________________________________________________________
consensus AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
. : . : . : . : . : . :
rJMSF012O09- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
rJMSF032K04- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
rJMSF027K11- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
rJMSF044P01- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
____________________________________________________________
consensus CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
. : . : . : . : . : . :
rJMSF012O09- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
rJMSF032K04- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
rJMSF027K11- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
rJMSF044P01- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
____________________________________________________________
consensus TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
. : . : . : . : . : . :
rJMSF012O09- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
rJMSF032K04- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
rJMSF027K11- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
rJMSF044P01- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
____________________________________________________________
consensus CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
. : . : . : . : . : . :
rJMSF012O09- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
rJMSF032K04- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
rJMSF027K11- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
rJMSF044P01- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
____________________________________________________________
consensus CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
. : . : . : . : . : . :
rJMSF012O09- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
rJMSF032K04- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
rJMSF027K11- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
rJMSF044P01- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
JMSF032K04+ TCAGCAGCCCGTAGAG
JMSF044P01+ TCAGCAGCCCGTAGAG
____________________________________________________________
consensus TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
. : . : . : . : . : . :
rJMSF012O09- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
rJMSF032K04- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
rJMSF027K11- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
rJMSF044P01- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
JMSF032K04+ CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
JMSF044P01+ CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
JMSF027K11+ TCTCGCGAGATCAACTCATTCGAGAAGGA
____________________________________________________________
consensus CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
. : . : . : . : . : . :
rJMSF012O09- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
rJMSF032K04- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
rJMSF027K11- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
rJMSF044P01- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
JMSF032K04+ CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
JMSF044P01+ CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
JMSF027K11+ CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
____________________________________________________________
consensus CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
. : . : . : . : . : . :
rJMSF012O09- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
rJMSF032K04- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
rJMSF027K11- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
rJMSF044P01- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
JMSF032K04+ GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
JMSF044P01+ GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
JMSF027K11+ GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
____________________________________________________________
consensus GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
. : . : . : . : . : . :
rJMSF012O09- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
rJMSF032K04- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
rJMSF027K11- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
rJMSF044P01- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
JMSF032K04+ AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
JMSF044P01+ AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
JMSF027K11+ AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
____________________________________________________________
consensus AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
. : . : . : . : . : . :
rJMSF032K04- GAACAACCTGTCCTTCTCTTCAGAATCCTTGATG
rJMSF027K11- GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
rJMSF044P01- GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
JMSF032K04+ GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
JMSF044P01+ GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
JMSF027K11+ GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
____________________________________________________________
consensus GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
. : . : . : . : . : . :
rJMSF027K11- CTCAGA
rJMSF044P01- CTCAGA
JMSF032K04+ CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
JMSF044P01+ CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
JMSF027K11+ CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
rJMSF003J02+ TGGATATTCTCAATGGNGGTCTAGAATCCATAAAATGCCCGCGCCTCCGTAAT
____________________________________________________________
consensus CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
. : . : . : . : . : . :
JMSF032K04+ CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
JMSF044P01+ CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
JMSF027K11+ CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
rJMSF003J02+ NTAGACCTCCTTCATCAACCGTCCAGCAAGATTNTCCAAAACGANGTNGTNGGNGGCGGC
____________________________________________________________
consensus CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
. : . : . : . : . : . :
JMSF032K04+ AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
JMSF044P01+ AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
JMSF027K11+ AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
rJMSF003J02+ AAAAAAGGCAAGTACGNGTTTAATAAAGNGTTTCAATTNTCAGAGGTTAGGGCTTCCCCC
____________________________________________________________
consensus AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
. : . : . : . : . : . :
JMSF032K04+ TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
JMSF044P01+ TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
JMSF027K11+ TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
rJMSF003J02+ TGACGGNGATCCTGAGAGAGATCGACCTCCTCCCCCGTCCNGAAAGACGCAACAGCTTTN
____________________________________________________________
consensus TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
. : . : . : . : . : . :
JMSF032K04+ TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
JMSF044P01+ TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
JMSF027K11+ TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
rJMSF003J02+ TTATACATCNCCCNGATTTGCGGGTACTCNATCGGGAACNTACNGAATCGGTNTGGATTG
____________________________________________________________
consensus TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
. : . : . : . : . : . :
JMSF032K04+ GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
JMSF044P01+ GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
JMSF027K11+ GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
rJMSF003J02+ GGGGCGAGAAGAGGCTNTTCCGGAATCGAAGGCNTTTTNTTCAGCGAAATTGGATCTAGG
____________________________________________________________
consensus GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
. : . : . : . : . : . :
JMSF032K04+ GATTGCTAGGGCTTTGAG
JMSF044P01+ GATTGCTAGGGCTTTGAG
JMSF027K11+ GATTGCTAGGGCTTTGAG
rJMSF003J02+ GATTGCTAGGGCTTTGAGNCNATGAAGAAGNGAAGNGATGGTTTTTTTTTTTTCTTCTTG
____________________________________________________________
consensus GATTGCTAGGGCTTTGAGNCNATGAAGAAGNGAAGNGATGGTTTTTTTTTTTTCTTCTTG
. : . : . : . : . : . :
rJMSF003J02+ ATTAAAGTTGAGATCTTTTAATTCTTCTTTTTCTTGATTAAAGCTAAGATCTTGAAGTTC
____________________________________________________________
consensus ATTAAAGTTGAGATCTTTTAATTCTTCTTTTTCTTGATTAAAGCTAAGATCTTGAAGTTC