Contig 009881:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003B16Sequence266003518 (3)emb|CDO99172.1|2e-05unnamed protein product [Coffea canephora]635009881 (2)gb|EYU32522.1|1e-81hypothetical protein MIMGU_mgv1a005924mg [Erythranthe guttata]
JMSF019J15Sequence546003518 (3)ref|XP_009629653.1|2e-71PREDICTED: ureidoglycolate hydrolase [Nicotiana tomentosiformis]753009881 (2)ref|XP_006420164.1|2e-117hypothetical protein CICLE_v10004873mg [Citrus clementina] gb|ESR33404.1| hypoth

Alignment

This contig is upended


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rJMSF019J15+          GACTGCGATTGCTGCTCCCGCGAGTATCAAAGTTGACTTCGAAGGCAATGGAGGCCATGC
                      ____________________________________________________________
consensus             GACTGCGATTGCTGCTCCCGCGAGTATCAAAGTTGACTTCGAAGGCAATGGAGGCCATGC
 
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rJMSF019J15+          TGGAGCTGTTCTGATGCCAAAGAGAAACGATGCTGGACTGGCTGCCACGGAGTTGGCACT
                      ____________________________________________________________
consensus             TGGAGCTGTTCTGATGCCAAAGAGAAACGATGCTGGACTGGCTGCCACGGAGTTGGCACT
 
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rJMSF019J15+          AGCAGTAGAGAAACACGTATTGGACTCGGGATCAATTGATACAGTTGGCACTGTTGGTAT
rJMSF003B16+                                   TCGGGATCAATTGATACAGTTGGCACTGTTGGTAT
                      ____________________________________________________________
consensus             AGCAGTAGAGAAACACGTATTGGACTCGGGATCAATTGATACAGTTGGCACTGTTGGTAT
 
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rJMSF019J15+          TCTGGAGCTGCATCCAGGAGCAATAAACAGCATCCCGAGCAAATCACACCTGGAAATAGA
rJMSF003B16+          TCTGGAGCTGCATCCAGGAGCAATAAACAGCATCCCGAGCAAATCACACCTGGAAATAGA
                      ____________________________________________________________
consensus             TCTGGAGCTGCATCCAGGAGCAATAAACAGCATCCCGAGCAAATCACACCTGGAAATAGA
 
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rJMSF019J15+          TACACGTGATATAGATGAAAAGCGAAGAAATGATGTTGTTGAGAAAATACGTGAGTCTGC
rJMSF003B16+          TACACGTGATATAGATGAAAAGCGAAGAAATGATGTTGTTGAGAAAATACGTGAGTCTGC
                      ____________________________________________________________
consensus             TACACGTGATATAGATGAAAAGCGAAGAAATGATGTTGTTGAGAAAATACGTGAGTCTGC
 
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rJMSF019J15+          CTTAAGCATATCCGAGAAACGTAGAGTGAAGGTGTCAGAATTTAAAATAGTGAACCAAGA
rJMSF003B16+          CTTAAGCATATCCGAGAAACGTAGAGTGAAGGTGTCAGAATTTAAAATAGTGAACCAAGA
                      ____________________________________________________________
consensus             CTTAAGCATATCCGAGAAACGTAGAGTGAAGGTGTCAGAATTTAAAATAGTGAACCAAGA
 
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rJMSF019J15+          TCCTCCTGCCCTTTCCGACGAATCAATCATTAGAGCAACAGAATCAGCGTGCCGGGAGCT
rJMSF003B16+          TCCTCNTGCCCTTTCCGANGAATCAATCATTAGAGCAACAGAATCAGCGTGCCGGGAGCT
                      ____________________________________________________________
consensus             TCCTCCTGCCCTTTCCGACGAATCAATCATTAGAGCAACAGAATCAGCGTGCCGGGAGCT
 
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rJMSF019J15+          AAATTTGAGTTACAAGAAAATGATTAGCCGAGCCTATCATGATTCCTTGTTCATGGCCAG
rJMSF003B16+          AAATTTGAGTTACAAGAAAATGATTAGCCGAGCCTATCATGATTCNTTGTTCATGGCCAG
                      ____________________________________________________________
consensus             AAATTTGAGTTACAAGAAAATGATTAGCCGAGCCTATCATGATTCCTTGTTCATGGCCAG
 
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rJMSF019J15+          AATATCTCCAATGGGCATGATATTCATTCCATGCTACAAAGGATACAGCCATAAACCCGA
rJMSF003B16+          AATATCTCCAATGGGCATGATATTCATTCCATGCTACAAAGGATACAGCCATAAACCCGA
                      ____________________________________________________________
consensus             AATATCTCCAATGGGCATGATATTCATTCCATGCTACAAAGGATACAGCCATAAACCCGA
 
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rJMSF019J15+          AGAATTTGCAGGTGTTGAGGATATTGCAAATGGTGTGAAAGTATTAGCATTCACTCTTGC
rJMSF003B16+          AGAATTTGCAGGTGTTGAGGATATTGCAAATGGTGTGAAAGTATTAGCATTCNCTCTTGC
                      ____________________________________________________________
consensus             AGAATTTGCAGGTGTTGAGGATATTGCAAATGGTGTGAAAGTATTAGCATTCACTCTTGC
 
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rJMSF019J15+          AAAGTTGTCCTTGTCTTGATATGCCTTGAACACAAGAAAGATCAGAAGAGTAACGCTAAT
rJMSF003B16+          AAAGTTGTCCTTGTCTTGATATGCCTTGNACACAAGAAAGATCAGAAGAGTAACGCTAAT
                      ____________________________________________________________
consensus             AAAGTTGTCCTTGTCTTGATATGCCTTGAACACAAGAAAGATCAGAAGAGTAACGCTAAT
 
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rJMSF019J15+          ATTTGCTTTCAAGTGATTGCTAGTTTGAAAGCTTACAATCCAACAAGAAGAATAGTTCCC
rJMSF003B16+          ATTTGCTTTCAAGTGATTGNTAGTTTGAAAGCTTACAATCCAACAAGANGAATAGTTCCC
                      ____________________________________________________________
consensus             ATTTGCTTTCAAGTGATTGCTAGTTTGAAAGCTTACAATCCAACAAGAAGAATAGTTCCC
 
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rJMSF019J15+          TTTGTAAGGCTAATATTCAGCAAAGC                                  
rJMSF003B16+          TTNGTAAGGCTAATATTCAGCAAAGCATGGCGTAACGCTAATAAGACTTTGCTTAACTAA
                      ____________________________________________________________
consensus             TTTGTAAGGCTAATATTCAGCAAAGCATGGCGTAACGCTAATAAGACTTTGCTTAACTAA