| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046A20 | Sequence | 581 | 009879 (5) | ref|XP_002272549.1| | 2e-57 | PREDICTED: secoisolariciresinol dehydrogenase-like [Vitis vinifera] | 583 | 009879 (5) | gb|AFK46966.1| | 3e-56 | unknown [Lotus japonicus] |
| JMSF002J05 | Sequence | 341 | 010684 (31) | ref|XP_004246325.1| | 2e-41 | PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop | 708 | 009879 (5) | emb|CBI28276.3| | 5e-64 | unnamed protein product [Vitis vinifera] |
| JMSF032C07 | Sequence | 680 | 009879 (5) | ref|XP_002272549.1| | 2e-68 | PREDICTED: secoisolariciresinol dehydrogenase-like [Vitis vinifera] | 725 | 009879 (5) | ref|XP_011088939.1| | 9e-92 | PREDICTED: secoisolariciresinol dehydrogenase-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFF046A20- GTTGAAGGGAGGAAGTATTGGTCATCTCATCTCAAGAGATCG
____________________________________________________________
consensus GTTGAAGGGAGGAAGTATTGGTCATCTCATCTCAAGAGATCG
. : . : . : . : . : . :
JMFF046A20- ATTAAAGAAAAATGGTGAGCAGTTCGGTCCTTTCTACTGCTGCTAAGAGGTTGGATGGAA
____________________________________________________________
consensus ATTAAAGAAAAATGGTGAGCAGTTCGGTCCTTTCTACTGCTGCTAAGAGGTTGGATGGAA
. : . : . : . : . : . :
JMFF046A20- GAGTAGCCATAATTACTGGTGGTGTTGGTGGCATTGGATCTGCCACTGCGAAGCTATTCT
____________________________________________________________
consensus GAGTAGCCATAATTACTGGTGGTGTTGGTGGCATTGGATCTGCCACTGCGAAGCTATTCT
. : . : . : . : . : . :
JMFF046A20- GTCAACATGGTGCCAAAGTCCTAATAGCCGACACCCGAGATGATGATGAAAGCCAATCTA
____________________________________________________________
consensus GTCAACATGGTGCCAAAGTCCTAATAGCCGACACCCGAGATGATGATGAAAGCCAATCTA
. : . : . : . : . : . :
JMFF046A20- TCTGCAAAGATTTAGGTCCCGGTAACGCTTTCTTTGTTCACTGTGATGTCACAAGCGAAG
rJMSF032C07+ CTTTGTTCACTGTGATGTCACAAGCGAAT
JMSF032C07- CTTTGTTCACTGTGATGTCACAAGCGAAT
rJMSF002J05+ CTTTCTTTGTTCACTGTGATGTCACAAGCGAAG
____________________________________________________________
consensus TCTGCAAAGATTTAGGTCCCGGTAACGCTTTCTTTGTTCACTGTGATGTCACAAGCGAAT
. : . : . : . : . : . :
JMFF046A20- CAGATGTCCAAAATGCAGTGAACAAAGCAGTCTCTACACATGGAAGGCTTGATATAATGG
rJMFF046A20+ CCAAAATGCAGTGAACAAAGCAGTCTCTACACATGGAAGGCTGNATATAATGG
rJMSF032C07+ CAGACGTCCAAAGCGCAGTGAACAAAGCAGTCTCCACCCATGGAAGGCTTGACATAATGG
JMSF032C07- CAGACGTCCAAAGCGCAGTGAACAAAGCAGTCTCCACCCATGGAAGGCTTGACATAATGG
rJMSF002J05+ CAGATGTCCAAAATGCAGTGAACAAAGCAGTCTCTACACATGGAAGGCTTGATATAATGG
____________________________________________________________
consensus CAGATGTCCAAAATGCAGTGAACAAAGCAGTCTCTACACATGGAAGGCTTGATATAATGG
. : . : . : . : . : . :
JMFF046A20- TGAACAATGCAGGCATCACGGGAGCCAAGGGATTGGACATTCTTGATTGCGATGGGACTG
rJMFF046A20+ TGAACAATGCAGGCATCACGGGAGCCAAGGGATTGGACATTCTTGATTGCGATGGGACTG
rJMSF032C07+ TGAACAATGCAGGCATCTTGGGAGCCAAGGTATCGGACATTCTTGATTGCGATGCGACTG
JMSF032C07- TGAACAATGCAGGCATCTTGGGAGCCAAGGTATCGGACATTCTTGATTGCGATGCGACTG
rJMSF002J05+ TGAACAATGCAGGCATCACGGGAGCCAAGGGATTGGACATTCTTGATTGCGATGGGACTG
____________________________________________________________
consensus TGAACAATGCAGGCATCACGGGAGCCAAGGGATTGGACATTCTTGATTGCGATGGGACTG
. : . : . : . : . : . :
JMFF046A20- ATTTTGTTAACGTGTTTCGTGTTAACACCCTAGGTGCATTTCTGGGAACGAAACACGCTG
rJMFF046A20+ ATTTTGTTAACGTGTTTCGTGTTAACACCCTAGGTGCATTTCTGGGAACGAAACACGCTG
rJMSF032C07+ ATTTTGTTAATGTGTTTCTTGTTAACACCCTAGGTGCATTTCTGGGAACGAAACACGCTG
JMSF032C07- ATTTTGTTAATGTGTTTCTTGTTAACACCCTAGGTGCATTTCTGGGAACGAAACACGCTG
rJMSF002J05+ ATTTTGTTAACGTGTTTCGTGTTAACACCCTAGGTGCATTTCTGGGAACGAAACACGCTG
____________________________________________________________
consensus ATTTTGTTAACGTGTTTCGTGTTAACACCCTAGGTGCATTTCTGGGAACGAAACACGCTG
. : . : . : . : . : . :
JMFF046A20- CTCGTGTGATGAAACCCGTGCAAAGGGGGAGCATAATAAACACAGCTAGTGTTTCTGGTG
rJMFF046A20+ CTCGTGTGATGAAACCCGTGCAAAGGGGGAGCATAATAAACACAGCTAGTGTTTCTGGTG
rJMSF032C07+ CTCGTGTGATGAAACCCGTGCAAAGGGGGAGCATAATAAACACAGCTAGTGTTGCTGGTT
JMSF032C07- CTCGTGTGATGAAACCCGTGCAAAGGGGGAGCATAATAAACACAGCTAGTGTTGCTGGTT
rJMSF002J05+ CTCGTGTGATGAAACCCGTGCAAAGGGGGAGCATAATAAACACAGCTAGTGTTTCTGGTG
____________________________________________________________
consensus CTCGTGTGATGAAACCCGTGCAAAGGGGGAGCATAATAAACACAGCTAGTGTTTCTGGTG
. : . : . : . : . : . :
JMFF046A20- TTATGGGGGGTTTTCCACATGCTTATACGTGCTCNAAACATGCGATTGTTGGCCT
rJMFF046A20+ TTATGGGGGGTTTTCAACATGCTTATACGTGCTCAAAACATGCGATTGTTGGCCTGACTA
rJMSF032C07+ TTATGGGGGGTTTTCCACATGCTTATACGTGCTCAAAACATGCAATTGTTGGCCTCACTA
JMSF032C07- TTATGGGGGGTTTTCCACATGCTTATACGTGCTCAAAACATGCAATTGTTGGCCTCACTA
rJMSF002J05+ TTATGGGGGGTTTTCAACATGCTTATACGTGCTCAAAACATGCGATTGTTGGCCTGACTA
____________________________________________________________
consensus TTATGGGGGGTTTTCCACATGCTTATACGTGCTCAAAACATGCGATTGTTGGCCTCACTA
. : . : . : . : . : . :
rJMFF046A20+ AGAATACTGCCCTCGACTTGGGGCGATACGGTATCCGAGTCAACTGTG-TTCCCCTTATA
rJMSF032C07+ AGAACACTGCCCTTGACTTGGGGCGATATGGTATCCGAGTCAATTGTGTTTCCCCTTATG
JMSF032C07- AGAACACTGCCCTTGACTTGGGGCGATATGGTATCCGAGTCAATTGTG-TT
rJMSF002J05+ AGAATACTGCCCTCGACTTGGGGCGATACGGTATCCGAGTCAACTGTG-TTCCCCTTATA
____________________________________________________________
consensus AGAACACTGCCCTTGACTTGGGGCGATATGGTATCCGAGTCAATTGTG-TTCCCCTTATA
. : . : . : . : . : . :
rJMFF046A20+ TAATTCCTACACAAATGATAAGGACCTATTTTGGGTTGGCAGAGGATGATAAACTTGACG
rJMSF032C07+ CAGTTCCTACACAGATGGCAAGGAGCTATTTTGGGTTGTCAGAGGATGACAAATTTGATG
rJMSF002J05+ TAATTCCTACACAAATGATAAGGACCTATTTTGGGTTGGCAGAGGATGATAAACTTGACG
____________________________________________________________
consensus TAATTCCTACACAAATGATAAGGACCTATTTTGGGTTGGCAGAGGATGATAAACTTGACG
. : . : . : . : . : . :
rJMFF046A20+ TGTATTCAAACCTTAAAGGTGTTGATTTGATGGCAGAGGATGTTGCAGAGGCTGTTCTTT
rJMSF032C07+ TGTATTCAAGCCTTAAAGGTGTGGATTTGATGGCAGAGGATATTGCAGAGGCTGTTCTTT
rJMSF002J05+ TGTATTCAAACCTTAAAGGTGTTGATTTGATGGCAGAGGATGTTGCAGAGGCTGTTCTTT
____________________________________________________________
consensus TGTATTCAAACCTTAAAGGTGTTGATTTGATGGCAGAGGATGTTGCAGAGGCTGTTCTTT
. : . : . : . : . : . :
rJMFF046A20+ ATCTAGCAAGTGATGAGTCGAAGTATGTGAGTGGCCACAATCTTGTTGTGGATGCTGGCT
rJMSF032C07+ ATCTTGCAAGTGATGAGTCCAAGTATGTGAGTGGCCACAATCTTGTTGTGGATGCTGGCT
rJMSF002J05+ ATCTAGCAAGTGATGAGTCGAAGTATGTGAGTGGCCACAATCTTGTTGTGGATGCTGGCT
____________________________________________________________
consensus ATCTAGCAAGTGATGAGTCGAAGTATGTGAGTGGCCACAATCTTGTTGTGGATGCTGGCT
. : . : . : . : . : . :
rJMFF046A20+ TCTCCATTTCTAATTTAGCCTTAAATCTTT
rJMSF032C07+ TCTCCATTTCTAATTTAGCCTTAAATCTTTTCAACCAATAAATTATATTATATATATTCC
rJMSF002J05+ TCTCCATTTCTAATTTAGCCTTAAATCTTTTCAACCAATAAATTATATTATATATATTCC
____________________________________________________________
consensus TCTCCATTTCTAATTTAGCCTTAAATCTTTTCAACCAATAAATTATATTATATATATTCC
. : . : . : . : . : . :
rJMSF032C07+ ATATGCATTATATT
rJMSF002J05+ ATATGCATTATATTTAAGGTAATCTGGTTTATGGCAAATCATATAATAATCCATGGACAT
____________________________________________________________
consensus ATATGCATTATATTTAAGGTAATCTGGTTTATGGCAAATCATATAATAATCCATGGACAT