Contig 009878:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002I01-                         GGCTATTGTGCTCCATCGTCTTCTTCGCTCGCTCTGTTCACTCTGC
rJMSF002I01+                        GGCTATTGTGCTCCATCGTCTTCTTCGCTCGCTCTGTTCACTCTGC
                      ____________________________________________________________
consensus                           GGCTATTGTGCTCCATCGTCTTCTTCGCTCGCTCTGTTCACTCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002I01-           GAATTGAAGCTTCGAAAATGGCGAAAGGCAAGAAGGAGCTTCTTACGTCGGCCCCATGGA
rJMSF002I01+          GAATTGAAGCTTCGAAAATGGCGAAAGGCAAGAAGGAGCTTCTTACGTCGGCCCCATGGA
                      ____________________________________________________________
consensus             GAATTGAAGCTTCGAAAATGGCGAAAGGCAAGAAGGAGCTTCTTACGTCGGCCCCATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002I01-           GGGTGGGCCCCGAAGAGGACGAAAAGTTCAAGGACGCGAAGATGAAGGTTACGAGCCAGC
rJMSF002I01+          GGGTGGGCCCCGAAGAGGACGAAAAGTTCAAGGACGCGAAGATGAAGGTTACGAGCCAGC
                      ____________________________________________________________
consensus             GGGTGGGCCCCGAAGAGGACGAAAAGTTCAAGGACGCGAAGATGAAGGTTACGAGCCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002I01-           CGGGTTCGACTCCCACTATGCACGTCCCCGGAGTGAAATCCGTTAAATCCAAAGCCAGTG
rJMSF002I01+          CGGGTTCGACTCCCACTATGCACGTCCCCGGAGTGAAATCCGTTAAATCCAAAGCCAGTG
                      ____________________________________________________________
consensus             CGGGTTCGACTCCCACTATGCACGTCCCCGGAGTGAAATCCGTTAAATCCAAAGCCAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002I01-           AGCTCGAAGACGATTCTCGCACTGAAATTGACCCTGAACTACGCTACAGCTTCCAGCGCA
rJMSF002I01+          AGCTCGAAGACGATTCTCGCACTGAAATTGACCCTGAACTACGCTACAGCTTCCAGCGCA
                      ____________________________________________________________
consensus             AGCTCGAAGACGATTCTCGCACTGAAATTGACCCTGAACTACGCTACAGCTTCCAGCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002I01-           ACTTCCAGTTTCTTCAACGCGTTTTCAGCATTGACACCATTGTTAAACCTCTCCCATC  
rJMSF002I01+          ACTTCCAGTTTCTTCAACGCGTTTTCAGCATTGACACCATTGTTAAACCTCTCCCATCGG
                      ____________________________________________________________
consensus             ACTTCCAGTTTCTTCAACGCGTTTTCAGCATTGACACCATTGTTAAACCTCTCCCATCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002I01+          GAATGCAATACAATGTTTCTCGTAACTTGAGCTTCTTTACTCGCATCTTTACACAGTTCT
                      ____________________________________________________________
consensus             GAATGCAATACAATGTTTCTCGTAACTTGAGCTTCTTTACTCGCATCTTTACACAGTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002I01+          TTGATCCTGATGGAATAGCAGATGCACAAAAATCTCTAGGCTTGGGACAAGAAGGAAAAA
                      ____________________________________________________________
consensus             TTGATCCTGATGGAATAGCAGATGCACAAAAATCTCTAGGCTTGGGACAAGAAGGAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002I01+          CGCGTAGGGTGAGTTGAAGAAGTTGCCAAGTATCTGTAACTATTGTGTATGGAATTGTCT
                      ____________________________________________________________
consensus             CGCGTAGGGTGAGTTGAAGAAGTTGCCAAGTATCTGTAACTATTGTGTATGGAATTGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002I01+          GCAATTTTTGTGTGTTGGCATACTATTGCTCATTTTTACTGCTCTGCTACATTCGAAATC
                      ____________________________________________________________
consensus             GCAATTTTTGTGTGTTGGCATACTATTGCTCATTTTTACTGCTCTGCTACATTCGAAATC