Contig 009874:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001P07Sequence226004913 (7)739009874 (3)ref|XP_009773779.1|3e-80PREDICTED: protein NLP7 [Nicotiana sylvestris]
JMSF028F16Sequence684004913 (7)ref|XP_010325347.1|3e-61PREDICTED: protein NLP6-like isoform X2 [Solanum lycopersicum]714009874 (3)ref|XP_009773779.1|1e-84PREDICTED: protein NLP7 [Nicotiana sylvestris]
JMSF041H18Sequence707009874 (3)ref|XP_009773779.1|1e-76PREDICTED: protein NLP7 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF028F16+                       TGGAAACACCCAACACATTGGGAATAATAGCTTGTCAACCAGCAAGA
                      ____________________________________________________________
consensus                          TGGAAACACCCAACACATTGGGAATAATAGCTTGTCAACCAGCAAGA
 
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rJMSF028F16+          GAGATCAATTTATCAGCTGCATTTGCATCCCTAGATGCTCTGGTTGCAGAGCAATTCCAA
rJMSF001P07+                                                   GGTTGCAGAGCAATTCCAA
                      ____________________________________________________________
consensus             GAGATCAATTTATCAGCTGCATTTGCATCCCTAGATGCTCTGGTTGCAGAGCAATTCCAA
 
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rJMSF028F16+          AAGCCATTTGGGGGAATGCTTGTTGAGGATGCAGGTAGTTCACATGATCTTAGGAATCTC
rJMSF041H18+                       GAATGCTTGTTGAGGATGCAGGTAGTTCACATGATCTTAGGAATCTC
rJMSF001P07+          AAGCCATTTGGGGGAATGCTTGTTGAGGATGCAGGTAGTTCACATGATCTTAGGAATCTC
                      ____________________________________________________________
consensus             AAGCCATTTGGGGGAATGCTTGTTGAGGATGCAGGTAGTTCACATGATCTTAGGAATCTC
 
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rJMSF028F16+          TGCCAAGCTGGAGAAGCTCAGTTTGATGAACGCATGCCAGAACACAGTTTGACGCACCCA
rJMSF041H18+          TGCCAAGCTGGAGAAGCTCAGTTTGATGAACGCATGCCAGAACACAGTTTGACGCACCCA
rJMSF001P07+          TGCCAAGCTGGAGAAGCTCAGTTTGATGAACGCATGCCAGAACACAGTTTGACGCACCCA
                      ____________________________________________________________
consensus             TGCCAAGCTGGAGAAGCTCAGTTTGATGAACGCATGCCAGAACACAGTTTGACGCACCCA
 
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rJMSF028F16+          CCACGTTCTGATGCGATTCCCATAGATCACATCACTATTGCTGCTGAAAGAGTGCCCCAA
rJMSF041H18+          CCACGTTCTGATGCGATTCCCATAGATCACATCACTATTGCTGCTGAAAGAGTGCCCCAA
rJMSF001P07+          CCACGTTCTGATGCGATTCCCATAGATCACATCACTATTGCTGCTGAAAGAGTGCCCCAA
                      ____________________________________________________________
consensus             CCACGTTCTGATGCGATTCCCATAGATCACATCACTATTGCTGCTGAAAGAGTGCCCCAA
 
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rJMSF028F16+          CATCCTGCCAGGCCAGAAGTGACATCTATCACAATAAAAGCTACGTACGGAGAAGATATC
rJMSF041H18+          CATCCTGCCAGGCCAGAAGTGACATCTATCACAATAAAAGCTACGTACGGAGAAGATATC
rJMSF001P07+          CATCCTGCCAGGCCAGAAGTGACATCTATCACAATAAAAGCTACGTACGGAGAAGATATC
                      ____________________________________________________________
consensus             CATCCTGCCAGGCCAGAAGTGACATCTATCACAATAAAAGCTACGTACGGAGAAGATATC
 
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rJMSF028F16+          ATAAGGTTTCGACTACCTCTGGGCTCCGGCATAGTGAAATTACAGGAGGAAGTAGCAAAG
rJMSF041H18+          ATAAGGTTTCGACTACCTCTGGGCTCCGGCATAGTGAAATTACAGGAGGAAGTAGCAAAG
rJMSF001P07+          ATAAGGTTTCGACTACCTCTGGGCTCCGGCATAGTGAAATTACAGGAGGAAGTAGCAAAG
                      ____________________________________________________________
consensus             ATAAGGTTTCGACTACCTCTGGGCTCCGGCATAGTGAAATTACAGGAGGAAGTAGCAAAG
 
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rJMSF028F16+          AGGTTGAAACTAGAGCTGGGCACCTTCGAAATCAAGTATCTAGACGACGATCACGAGTGG
rJMSF041H18+          AGGTTGAAACTAGAGCTGGGCACCTTCGAAATCAAGTATCTAGACGACGATCACGAGTGG
rJMSF001P07+          AGGTTGAAACTAGAGCTGGGCACCTTCGAAATCAAGTATCTAGACGACGATCACGAGTGG
                      ____________________________________________________________
consensus             AGGTTGAAACTAGAGCTGGGCACCTTCGAAATCAAGTATCTAGACGACGATCACGAGTGG
 
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rJMSF028F16+          GTTTTAATTGCCTGCGATGCAGACTTGCAGGAATGCGTCGACATATCAAGATCATCAGGT
rJMSF041H18+          GTTTTAATTGCCTGCGATGCAGACTTGCAGGAATGCGTCGACATATCAAGATCATCAGGT
rJMSF001P07+          GTTTTAATTGCCTGCGATGCAGACTTGCAGGAATGCGTCGACATATCAAGATCATCAGGT
                      ____________________________________________________________
consensus             GTTTTAATTGCCTGCGATGCAGACTTGCAGGAATGCGTCGACATATCAAGATCATCAGGT
 
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rJMSF028F16+          GGCAATATAACCAGACTGTTGATTCATGACATCATGCCCCATCTTGGAAGCTCATGTGAA
rJMSF041H18+          GGCAATATAACCAGACTGTTGATTCATGACATCATGCCCCATCTTGGAAGCTCATGTGAA
rJMSF001P07+          GGCAATATAACCAGACTGTTGATTCATGACATCATGCCCCATCTTGGAAGCTCATGTGAA
                      ____________________________________________________________
consensus             GGCAATATAACCAGACTGTTGATTCATGACATCATGCCCCATCTTGGAAGCTCATGTGAA
 
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rJMSF028F16+          AGTTCAGGTGAATGAATGATTAGGCAAATAGAACTTGTACATAGCTTGTAGAACCATTCT
rJMSF041H18+          AGTTCAGGTGAATGAATGATTAGGCAAATAGAACTTGTACATAGCTTGTAGAACCATTCT
rJMSF001P07+          AGTTCAGGTGAATGAATGATTAGGCAAATAGAACTTGTACATAGCTTGTAGAACCATTCT
                      ____________________________________________________________
consensus             AGTTCAGGTGAATGAATGATTAGGCAAATAGAACTTGTACATAGCTTGTAGAACCATTCT
 
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rJMSF028F16+          TGCAGTCAAGTGTAGGGTTTAAATTTTGGTTTTGACAAATTGTAAGAAATTTTCAATTGT
rJMSF041H18+          CGCAGTCAAGTGTAGGGTTTAAATTTTGGTTTTGACAAATTGTAAGAAATTTTCAATTGT
rJMSF001P07+          TGCAGTCAAGTGTAGGGTTTAAATTTTGGTTTTGACAAATTGTAAGAAATTTTCAATTGT
                      ____________________________________________________________
consensus             TGCAGTCAAGTGTAGGGTTTAAATTTTGGTTTTGACAAATTGTAAGAAATTTTCAATTGT
 
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rJMSF028F16+          ATTAT                                                       
rJMSF041H18+          ATTATTATTTCTAGGTTCTAGGCAAATAAGGCTTCCCTTTCCTCCTTTTTTGTTTGGTAT
rJMSF001P07+          ATTATTATTTCTAGGTTCTAGGCAAATAAGGCTTCCCTTTCCTCCTTTTTTGTTTGGTAT
                      ____________________________________________________________
consensus             ATTATTATTTCTAGGTTCTAGGCAAATAAGGCTTCCCTTTCCTCCTTTTTTGTTTGGTAT
 
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rJMSF041H18+          AGAAGATTTCCACTGTTCTTTTCTTATCTGAAATTGTAAAAATGCTATGTTGGTCTTCTT
rJMSF001P07+          AGAAGATTTCCACTGTTCTTTTCTTATCTGAAATTGTAAAAATGCTATGTTGGTCTTCTT
                      ____________________________________________________________
consensus             AGAAGATTTCCACTGTTCTTTTCTTATCTGAAATTGTAAAAATGCTATGTTGGTCTTCTT