Contig 009873:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF001J03-                      GACGTTAAGCATTCAACCGAGAAGAGTTTAGGGCTCGTTTCCACACTGA
rJMSF047C19+                                       GAGAAGAGTTTAGGGCTCGTTTCCACACTGA
JMSF047C19-                                        GAGAAGAGTTTAGGGCTCGTTTCCACACTGA
                      ____________________________________________________________
consensus                        GACGTTAAGCATTCAACCGAGAAGAGTTTAGGGCTCGTTTCCACACTGA
 
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JMSF001J03-           TCCGCTCAAAACAGTTCGTTTTCTCCGCCGCAGATCTCCACCGCGTGGTTTCTGATGGAC
rJMSF047C19+          TCCGCCCAAAACAGTTCGTTTTCTCCGCCGCAGATCTCCACCGCGTGGTTTCTGATGGAC
JMSF047C19-           TCCGCCCAAAACAGTTCGTTTTCTCCGCCGCAGATCTCCACCGCGTGGTTTCTGATGGAC
                      ____________________________________________________________
consensus             TCCGCCCAAAACAGTTCGTTTTCTCCGCCGCAGATCTCCACCGCGTGGTTTCTGATGGAC
 
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JMSF001J03-           GAGTCTTTCAACGTCAACAACCTCCCTACCAGCCACTTGCTCGGCTCAGTTCCG      
rJMSF047C19+          GAGTCTTTCAACATCAACAACCTCCCTACCAGCCACTTGCTCGGCTCAGTTCCGAAGGAG
JMSF047C19-           GAGTCTTTCAACATCAACAACCTCCCTACCAGCCACTTGCTCGGCTCAGTTCCGAAGGAG
rJMSF001J03+                                                               GAAGGAG
                      ____________________________________________________________
consensus             GAGTCTTTCAACATCAACAACCTCCCTACCAGCCACTTGCTCGGCTCAGTTCCGAAGGAG
 
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rJMSF047C19+          ATGGGCAGCAATCAACAAACAATTGGAAAGGAGTGTTTAGTATATCTTCATATACCCAAT
JMSF047C19-           ATGGGCAGCAATCAACAAACAATTGGAAAGGAGTGTTTAGTATATCTTCATATACCCAAT
rJMSF001J03+          ATGGGCAGCAATCAACAAACAATTGGAAAGGAGTGTTTAGTATATCTTCATATACCCAAT
                      ____________________________________________________________
consensus             ATGGGCAGCAATCAACAAACAATTGGAAAGGAGTGTTTAGTATATCTTCATATACCCAAT
 
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rJMSF047C19+          ATTTTAATGTAGATACAGATGTTGTGTTAAACAGATTGATGTGTTCTTTGAATCCTACAA
JMSF047C19-           ATTTTAATGTAGATACAGATGTTGTGTTAAACAGATTGATGTGTTCTTTGAATCCTACAA
rJMSF001J03+          ATTTTAATGTAGATACAGATGTTGTGTTAAACAGATTGATGTGTTCTTTGAATCCTACAA
                      ____________________________________________________________
consensus             ATTTTAATGTAGATACAGATGTTGTGTTAAACAGATTGATGTGTTCTTTGAATCCTACAA
 
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rJMSF047C19+          GTGCTGATTTCTTCAGGAAAATTGATGCTAACCCTGATCT                    
JMSF047C19-           GTGCTGATTTCTTCAGGAAAATTGATGCTAACCCTGATCT                    
rJMSF001J03+          GTGCTGATTTCTTCAGAAAAATTGATGCTAACCCTGATCTTTATGGGCTTATCTGGATCT
                      ____________________________________________________________
consensus             GTGCTGATTTCTTCAGGAAAATTGATGCTAACCCTGATCTTTATGGGCTTATCTGGATCT
 
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rJMSF001J03+          CAACAACTTTGGTAGCTGCAATTTCTTCCTTTGGAAACTTGGCTACATATCTAATGCATA
                      ____________________________________________________________
consensus             CAACAACTTTGGTAGCTGCAATTTCTTCCTTTGGAAACTTGGCTACATATCTAATGCATA
 
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rJMSF001J03+          AGCAAAGTGATACTACTTCTACTAGGGCATTTGACGTCGGCTATATGAGTGTGGCTGCAT
                      ____________________________________________________________
consensus             AGCAAAGTGATACTACTTCTACTAGGGCATTTGACGTCGGCTATATGAGTGTGGCTGCAT
 
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rJMSF001J03+          TTTCTGTATACGGTTACGCATTCATTGTGCCACTGGGGTTTTACTTCTTGCTTCAGTACT
                      ____________________________________________________________
consensus             TTTCTGTATACGGTTACGCATTCATTGTGCCACTGGGGTTTTACTTCTTGCTTCAGTACT
 
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rJMSF001J03+          TGGGTTCTAATGCTAACCTTGTACGTTTTTGGTGCTTGTGGGCATATTCTCTCTTCATTT
                      ____________________________________________________________
consensus             TGGGTTCTAATGCTAACCTTGTACGTTTTTGGTGCTTGTGGGCATATTCTCTCTTCATTT
 
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rJMSF001J03+          TTATTCTCAGCTCTTTTCTCTTGATCATCCCAGTGGAATTTATCAAGTGGATCGTCATAT
                      ____________________________________________________________
consensus             TTATTCTCAGCTCTTTTCTCTTGATCATCCCAGTGGAATTTATCAAGTGGATCGTCATAT
 
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rJMSF001J03+          TACTCACTGGTGCAATGTCAGGCGCTTTTGTTACATTAAATCTTAAAAGCTTTGTACAGA
                      ____________________________________________________________
consensus             TACTCACTGGTGCAATGTCAGGCGCTTTTGTTACATTAAATCTTAAAAGCTTTGTACAGA
 
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rJMSF001J03+          CTAATGATCTCGCCATTGTGCCCATCGCTGCTTTTGTCCTACAAATGGGCCTGGCAATCT
                      ____________________________________________________________
consensus             CTAATGATCTCGCCATTGTGCCCATCGCTGCTTTTGTCCTACAAATGGGCCTGGCAATCT
 
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rJMSF001J03+          TCATCAAGATGTGGTTCTTTCCTTGAGTGTGGTGGCTATAGTGAATTTGTTTATTTTTCT
                      ____________________________________________________________
consensus             TCATCAAGATGTGGTTCTTTCCTTGAGTGTGGTGGCTATAGTGAATTTGTTTATTTTTCT
 
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rJMSF001J03+          CTCCCAGGAGTTGAGAACTTGATAATGGCCTGCTCAGATAGTTATGAAGAACTTGGAGTG
                      ____________________________________________________________
consensus             CTCCCAGGAGTTGAGAACTTGATAATGGCCTGCTCAGATAGTTATGAAGAACTTGGAGTG
 
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rJMSF001J03+          TTAATCTAGAAAAATATTTAATGGGAAATGCTGAGCATGAGAACTGCTACTGTAAAAATT
                      ____________________________________________________________
consensus             TTAATCTAGAAAAATATTTAATGGGAAATGCTGAGCATGAGAACTGCTACTGTAAAAATT