Contig 009867:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051J02Sequence312013535 (2)519009867 (2)ref|XP_009768257.1|6e-39PREDICTED: protein trichome birefringence-like 19 [Nicotiana sylvestris]
JMSF046J24Sequence730013535 (2)ref|XP_009768257.1|3e-36PREDICTED: protein trichome birefringence-like 19 [Nicotiana sylvestris]706009867 (2)ref|XP_009768257.1|7e-75PREDICTED: protein trichome birefringence-like 19 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF046J24+               GCAAACTCGTTGGCTGCCTCTACTGCTCAGAACCCAACGTTACCCACTTGACAAA
                      ____________________________________________________________
consensus                  GCAAACTCGTTGGCTGCCTCTACTGCTCAGAACCCAACGTTACCCACTTGACAAA
 
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rJMSF046J24+          AGACTTCAGCTACAGATGGGCTTTGAAGACAGCTTTTCGAGCAATTAATAGCTTGGAAAA
                      ____________________________________________________________
consensus             AGACTTCAGCTACAGATGGGCTTTGAAGACAGCTTTTCGAGCAATTAATAGCTTGGAAAA
 
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rJMSF046J24+          TTTTAAGGGCGTCGCTTTCTTGAGGGCGTTTGCCCCTCAGCACTTTGAACATGGGGCATT
                      ____________________________________________________________
consensus             TTTTAAGGGCGTCGCTTTCTTGAGGGCGTTTGCCCCTCAGCACTTTGAACATGGGGCATT
 
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rJMSF046J24+          CGATCAAGGTGGAGAGTGCGTGAGAACAGAGCCATTTCGGAGGAACGACACGATTTTGAA
rJMFF051J02+                               GAGAACAGAGCCATTTCGGAGGAACGACACGATTTTGAA
                      ____________________________________________________________
consensus             CGATCAAGGTGGAGAGTGCGTGAGAACAGAGCCATTTCGGAGGAACGACACGATTTTGAA
 
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rJMSF046J24+          GGAATTCCAGATAGACATGTATGATATTCAAAGGCAAGAGTTTAGCATTGCTGAGGAAGA
rJMFF051J02+          GGAATTCCAGATAGACATGTATGATATTCAAAGGCAAGAGTTTAGCATTGCTGAGGAAGA
                      ____________________________________________________________
consensus             GGAATTCCAGATAGACATGTATGATATTCAAAGGCAAGAGTTTAGCATTGCTGAGGAAGA
 
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rJMSF046J24+          AGGGAAGAAAAAGGGTTCGAAATTTAGATTGTTTGACGTTACGCAGGCAATGCTGTTGAG
rJMFF051J02+          GGGGAAGAAAAAGGGTTCGAAATTTAGATTGTTTGACGTTACGCAGGCAATGCTGTTGAG
                      ____________________________________________________________
consensus             GGGGAAGAAAAAGGGTTCGAAATTTAGATTGTTTGACGTTACGCAGGCAATGCTGTTGAG
 
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rJMSF046J24+          ACCCGATGGGCATCCTAATAAATACGGGCATTTGCAGAACCTGAATGTGACCATGTTTAA
rJMFF051J02+          ACCCGATGGGCATCCTAATAAATACGGGCATTTGCAGAACCTGAATGTGACCATGTTTAA
                      ____________________________________________________________
consensus             ACCCGATGGGCATCCTAATAAATACGGGCATTTGCAGAACCTGAATGTGACCATGTTTAA
 
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rJMSF046J24+          CGATTGTGTGCACTGGTGTTTGCCGGGGCCTATTGATACCTGGAGTGACTTCTTCATGGA
rJMFF051J02+          CGATTGTGTGCACTGGTGTTTGCCGGGGCCTATTGATACCTGGAGTGACTTCTTCATGGA
                      ____________________________________________________________
consensus             CGATTGTGTGCACTGGTGTTTGCCGGGGCCTATTGATACCTGGAGTGACTTCTTCATGGA
 
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rJMSF046J24+          GTTGGTGAAGAGGGAGCTTGAAGGTAATAGCTAAGGTGAATATTTATATATCTTTCAGTT
rJMFF051J02+          GTTGGTGAAGAGGGAGCTTGAAGGTAATAGCTAAGGTGAATATTTATATATCTTTCAGTT
                      ____________________________________________________________
consensus             GTTGGTGAAGAGGGAGCTTGAAGGTAATAGCTAAGGTGAATATTTATATATCTTTCAGTT
 
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rJMSF046J24+          CAAATTTTAATTCTTTTTTTTCCTCCCACATTCTTGTTGTTATTTGATTATCAGAGTTGA
rJMFF051J02+          CAAATTTTAATTCTTTTTTTTCCTCCCACATTCTTGTTGTTATTTGATTATCAGAGTTGA
                      ____________________________________________________________
consensus             CAAATTTTAATTCTTTTTTTTCCTCCCACATTCTTGTTGTTATTTGATTATCAGAGTTGA
 
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rJMSF046J24+          ATAGACTGATAAAATACGTGCAAAAATCAACCCAAATAGATTGGGTTGAAGTGTAACAAT
rJMFF051J02+          ATAGACTGATAAAATACGTGCAAAAATCAACCCAAATAGATTGGGTTGAAGTGTAACAAT
                      ____________________________________________________________
consensus             ATAGACTGATAAAATACGTGCAAAAATCAACCCAAATAGATTGGGTTGAAGTGTAACAAT
 
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rJMSF046J24+          ATGTGAGTATAGTTGTATTCTTGCTTTCATTATTGGGTAT                    
rJMFF051J02+          ATGTGAGTATAGTTGTATTCTTGCTTTCATTATTGGGTATTGAAAGGGAAAGTTGGAGCT
                      ____________________________________________________________
consensus             ATGTGAGTATAGTTGTATTCTTGCTTTCATTATTGGGTATTGAAAGGGAAAGTTGGAGCT