| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP017H07 | Sequence | 636 | 009863 (3) | ref|XP_007017515.1| | 9e-107 | Glucan endo-1,3-beta-glucosidase 7-beta-glucanase 7 isoform 2 [Theobroma cacao] | |||||
| JMFF025P16 | Sequence | 566 | 001801 (3) | emb|CDP07525.1| | 5e-77 | unnamed protein product [Coffea canephora] | 715 | 009863 (3) | ref|XP_007017515.1| | 8e-77 | Glucan endo-1,3-beta-glucosidase 7-beta-glucanase 7 isoform 2 [Theobroma cacao] |
| JMFF051D03 | Sequence | 607 | 001801 (3) | ref|XP_009758633.1| | 1e-83 | PREDICTED: glucan endo-1,3-beta-glucosidase 7-like isoform X2 [Nicotiana sylves | 523 | 009863 (3) | ref|XP_002509479.1| | 2e-31 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gb|EEF5 |
This contig is upended
. : . : . : . : . : . :
JMCP017H07- GCAGAGTGACC
____________________________________________________________
consensus GCAGAGTGACC
. : . : . : . : . : . :
JMCP017H07- CCCGGCCGGAAACGCTAGCCTTCTGTTTATTCCAACCAAACGGCGGCAGATACGACGCCG
____________________________________________________________
consensus CCCGGCCGGAAACGCTAGCCTTCTGTTTATTCCAACCAAACGGCGGCAGATACGACGCCG
. : . : . : . : . : . :
JMCP017H07- GCTCAAAGATAACGTACATGAACATGTTCGACGCGCAGTTGGGCGCCGTCAGGACGGCGT
____________________________________________________________
consensus GCTCAAAGATAACGTACATGAACATGTTCGACGCGCAGTTGGGCGCCGTCAGGACGGCGT
. : . : . : . : . : . :
JMCP017H07- TAAACGCGATGGGGTTCAAGGGAGTGGAGATTGCGGTGGCGGAAACGGGGTGGCCGTACA
____________________________________________________________
consensus TAAACGCGATGGGGTTCAAGGGAGTGGAGATTGCGGTGGCGGAAACGGGGTGGCCGTACA
. : . : . : . : . : . :
JMCP017H07- AGGGAGACAGCAATGAGGTTGGTCCCAGCGTTGACAACGCCAAGGCCTACGTTGGCAACC
____________________________________________________________
consensus AGGGAGACAGCAATGAGGTTGGTCCCAGCGTTGACAACGCCAAGGCCTACGTTGGCAACC
. : . : . : . : . : . :
JMCP017H07- TCGTTTCTCACCTGAGGTCCATGGTCGGAACTCCATTGATGCCGGGAAAATCAGTGGACA
rJMFF025P16+ AGGTCCATGGTCGGAACTCCATTGATGCCGGGAAAATCAGTGGACA
____________________________________________________________
consensus TCGTTTCTCACCTGAGGTCCATGGTCGGAACTCCATTGATGCCGGGAAAATCAGTGGACA
. : . : . : . : . : . :
JMCP017H07- CCTATCTGTTCGCATTGTACGACGAGGATCTGAAGCCCGGACCAACGTCCGAGAGATCCT
rJMFF025P16+ CCTATCTGTTCGCATTGTACGACGAGGATCTGAAGCCCGGACCAACGTCCGAGAGATCCT
____________________________________________________________
consensus CCTATCTGTTCGCATTGTACGACGAGGATCTGAAGCCCGGACCAACGTCCGAGAGATCCT
. : . : . : . : . : . :
JMCP017H07- TCGGTCTCTATAACACCGATTTAACCATGACCTATGATGCTGGACTTTCAAAATCATCCA
rJMFF025P16+ TCGGTCTCTATAACACCGATTTAACCATGACCTATGATGCTGGACTTTCAAAATCATCCA
____________________________________________________________
consensus TCGGTCTCTATAACACCGATTTAACCATGACCTATGATGCTGGACTTTCAAAATCATCCA
. : . : . : . : . : . :
JMCP017H07- CCCAGACTCCGACGACGCCAAAGAGTGCTCCGGCGATCGGTCCTCCGGCGTCAAAGAAGA
rJMFF025P16+ CCCAGACTCCGACGACGCCAAAGAGTGCTCCGGCGATCGGTCCTCCGGCGTCAAAGAAGA
____________________________________________________________
consensus CCCAGACTCCGACGACGCCAAAGAGTGCTCCGGCGATCGGTCCTCCGGCGTCAAAGAAGA
. : . : . : . : . : . :
JMCP017H07- ATAGTAGCTGGTGGTGCGTGCCCAAGGGTGGGGTATCAGATGCCCAGTTGCAAGCAAATC
rJMFF025P16+ ATAGTAGCTGGTGGTGCGTGCCCAAGGGTGGGGTATCAGATGCCCAGTTGCAAGCAAATC
____________________________________________________________
consensus ATAGTAGCTGGTGGTGCGTGCCCAAGGGTGGGGTATCAGATGCCCAGTTGCAAGCAAATC
. : . : . : . : . : . :
JMCP017H07- TAGATTATGCTTGTGCACTACAAGGAATTGATTGTtGCCCAATCCAGCCCcctccccggT
rJMFF025P16+ TAGATTATGCTTGTGCACTACAAGGAATTGATTGTAGCCCAATCCAGCCCGGAGGGGCCT
rJMFF051D03+ CTACAAGGAATTGATTGTAGCCCAATCCAGCCCGGAGGGGCCT
____________________________________________________________
consensus TAGATTATGCTTGTGCACTACAAGGAATTGATTGTAGCCCAATCCAGCCCGGAGGGGCCT
. : . : . : . : . : . :
JMCP017H07- GTaTgctcggCAACACAATCGCATC
rJMFF025P16+ GTTTCGAGCCCAACACAATCGCATCTCATGCTACATACGCCATGAACCTCGTATACCAAT
rJMFF051D03+ GTTTCGAGCCCAACACAATCGCATCTCATGCTACATACGCCATGAACCTCGTATACCAAT
____________________________________________________________
consensus GTTTCGAGCCCAACACAATCGCATCTCATGCTACATACGCCATGAACCTCGTATACCAAT
. : . : . : . : . : . :
rJMFF025P16+ CATCGGAAAAGAATTCATGGAATTGTGATTTCTCACAAACAGCCACCCTCACCTCCAACA
rJMFF051D03+ CATCGGAAAAGAATTCATGGAATTGTGATTTCTCACAAACAGCCACCCTCACCTCCAACA
____________________________________________________________
consensus CATCGGAAAAGAATTCATGGAATTGTGATTTCTCACAAACAGCCACCCTCACCTCCAACA
. : . : . : . : . : . :
rJMFF025P16+ ATCCTAGTTATAATGGATGTAGCTATCCTGGGGGAAGTGTCTGATCTGAGAAGGCTGTGT
rJMFF051D03+ ATCCTAGTTATAATGGATGTAGCTATCCTGGGGGAAGTGTCTGATCTGAGAAGGCTGTGT
____________________________________________________________
consensus ATCCTAGTTATAATGGATGTAGCTATCCTGGGGGAAGTGTCTGATCTGAGAAGGCTGTGT
. : . : . : . : . : . :
rJMFF025P16+ AATCAACTTGTAGGTGTCCATGTTTGAGTGGTTGTTTATTCTTATTGTTGTGTACTACGT
rJMFF051D03+ AATCAACTTGTAGGTGTCCATGTTTGAGTGGTTGTTTATTCTTATTGTTGTGTACTACTT
____________________________________________________________
consensus AATCAACTTGTAGGTGTCCATGTTTGAGTGGTTGTTTATTCTTATTGTTGTGTACTACTT
. : . : . : . : . : . :
rJMFF025P16+ TGGTGAATGGTGAGGAAAGTAGATTTTGCGTGGATAAGAATGAAGGATTCATGCAAACAA
rJMFF051D03+ TGGTGAATGGTGAGGAAAGTAGATTTTGCGTGGATAAGAATGAAGGATTCATGCAAACAA
____________________________________________________________
consensus TGGTGAATGGTGAGGAAAGTAGATTTTGCGTGGATAAGAATGAAGGATTCATGCAAACAA
. : . : . : . : . : . :
rJMFF025P16+ GTTTTCTATTTATGAGTGATCTTTCCTTAATGTAAACTAATGGACTTCCAACATTATTGT
rJMFF051D03+ GTTTTCTATTTATGAGTGATCTTTCCTTAATGTAAACTAATGGACTTCCAACATTATTGT
____________________________________________________________
consensus GTTTTCTATTTATGAGTGATCTTTCCTTAATGTAAACTAATGGACTTCCAACATTATTGT
. : . : . : . : . : . :
rJMFF025P16+ GTGTTACGT
rJMFF051D03+ GTGTTACGTTGTATTTTAATGGACCTCAAATCCTTTGGGCCTCTTTTGGTTATTTATTGG
____________________________________________________________
consensus GTGTTACGTTGTATTTTAATGGACCTCAAATCCTTTGGGCCTCTTTTGGTTATTTATTGG
. : . : . : . : . : . :
rJMFF051D03+ ACTTTTTTTTTTTGCATTGGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus ACTTTTTTTTTTTGCATTGGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG