Contig 009860:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020F14Sequence571003150 (4)gb|ADL63117.1|2e-97sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [691009860 (2)gb|ADL63117.1|3e-66sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [
JMFF050P20Sequence606003150 (4)gb|ADL63117.1|1e-106sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [592009860 (2)gb|ADL63117.1|1e-35sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [

Alignment

This contig is upended


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rJMFF020F14+             CACCAAAATGGCCGACAAATCTCGCCGCTTCGCCCCCAACGGTGATCTCATGCCACC
                      ____________________________________________________________
consensus                CACCAAAATGGCCGACAAATCTCGCCGCTTCGCCCCCAACGGTGATCTCATGCCACC
 
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rJMFF020F14+          CTCCGCCGGAGCCCGGGCCGGAGCTTTAACTCTCTTTTCCGTTCTCGGTATCCCTCTTGC
                      ____________________________________________________________
consensus             CTCCGCCGGAGCCCGGGCCGGAGCTTTAACTCTCTTTTCCGTTCTCGGTATCCCTCTTGC
 
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rJMFF020F14+          GGTGACTTACAGTATTCCATTCGCCCTTGCTTNTATCTTTTCAAGTAGTACCGGCTNTGG
rJMFF050P20+                 TACAGTATTCCATTCGCCCTTGCTTCTATCTTTTCAAGTAGTACCGGCTCTGG
                      ____________________________________________________________
consensus             GGTGACTTACAGTATTCCATTCGCCCTTGCTTCTATCTTTTCAAGTAGTACCGGCTCTGG
 
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rJMFF020F14+          CCAAGGTCTTTCTNTAGGAGTTTTGAACCTTGGGATTGTGGTGCCACAGATGTTCGTTTC
rJMFF050P20+          CCAA-GTCTTTCTCTAGGAGTTCTGAACCTTGGGATTGTGGTGCCACAGATGTTCGTTTC
                      ____________________________________________________________
consensus             CCAAGGTCTTTCTCTAGGAGTTTTGAACCTTGGGATTGTGGTGCCACAGATGTTCGTTTC
 
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rJMFF020F14+          ATTAGTGGGTGGACCTTGGGACCAGTTGTTTGGAGGTGGGAATTTGCCAGCATTTATAGT
rJMFF050P20+          ATTAGTGGGTGGACCTTGGGACCAGTTGTTTGGAGGTGGGAATTTGCCAGCATTTATAGT
                      ____________________________________________________________
consensus             ATTAGTGGGTGGACCTTGGGACCAGTTGTTTGGAGGTGGGAATTTGCCAGCATTTATAGT
 
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rJMFF020F14+          AGGGGCAATTTCGGCAGCACTGAGTGGGATATTCGCCATCACATTGCTTCCATCTCCTCC
rJMFF050P20+          AGGGGCAATTTCGGCAGCACTGAGTGGGATATTCGCCATCACATTGCTTCCATCTCCTCC
                      ____________________________________________________________
consensus             AGGGGCAATTTCGGCAGCACTGAGTGGGATATTCGCCATCACATTGCTTCCATCTCCTCC
 
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rJMFF020F14+          ACCTGATGCTAAGGCTGGGGTCCCTGTGGCTGCTTTCCATTGATGAGATGATCCCAGTTT
rJMFF050P20+          ACCTGATGCTAAGGCTGGGGTCCCTGTGGCTGCTTTCCATTGATGAGATGATCCCAGTTT
                      ____________________________________________________________
consensus             ACCTGATGCTAAGGCTGGGGTCCCTGTGGCTGCTTTCCATTGATGAGATGATCCCAGTTT
 
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rJMFF020F14+          GGAAAATTATGAATGTTTTTCCTTTATTGTCCTTAGCTTTTGGGTGGANGTATTTCTTTT
rJMFF050P20+          GGAAAATTATGAATGTTTTTCCTTTATTGTCCTTAGCTTTTGGGTGGATGTATTTCTTTT
                      ____________________________________________________________
consensus             GGAAAATTATGAATGTTTTTCCTTTATTGTCCTTAGCTTTTGGGTGGATGTATTTCTTTT
 
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rJMFF020F14+          TTTTCTCTTTTTTCATAC--TTTTTTTTTGGGTTTCTAGAAATCATAAATACCATATAAA
rJMFF050P20+          TTTTCTCTTTTTTCATACTTTTTTTTTTTGGGTTTCTAGAAATCATAAATACCATATAAA
                      ____________________________________________________________
consensus             TTTTCTCTTTTTTCATACTTTTTTTTTTTGGGTTTCTAGAAATCATAAATACCATATAAA
 
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rJMFF020F14+          TGGGGTCATGTTTAGTTAAGTTCAATGTTGCTAATTACCCTCAAGCTAGTACTTGTTCCC
rJMFF050P20+          TGGGGTCATGTTTAGTTAAGTTCAATGTTGCTAATTACCCTCAAGCTAGTACTTGTTCCC
                      ____________________________________________________________
consensus             TGGGGTCATGTTTAGTTAAGTTCAATGTTGCTAATTACCCTCAAGCTAGTACTTGTTCCC
 
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rJMFF020F14+          ATCAAGGATGTGGCCAGCTTGACTGGTGGGTGAGATGCTAACTTATTTCAAGCAAGCATA
rJMFF050P20+          ATCAAGGATGTGGCCAGCTTGACTGGTGGGTGAGATGCTAACTTATTTCAAGCAAGCATA
                      ____________________________________________________________
consensus             ATCAAGGATGTGGCCAGCTTGACTGGTGGGTGAGATGCTAACTTATTTCAAGCAAGCATA
 
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rJMFF020F14+          TCTCACAAGCAAAGAATTTTAATGCTACAAAAAACT                        
rJMFF050P20+          TCTCACAAGCAAAGAATTTTAATGCTACAAAAAACTTTAATATATACATCTTTTTAAGTC
                      ____________________________________________________________
consensus             TCTCACAAGCAAAGAATTTTAATGCTACAAAAAACTTTAATATATACATCTTTTTAAGTC