Contig 009858:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H06Sequence593007494 (3)ref|XP_009780813.1|295PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]709009858 (2)ref|XP_009780813.1|312PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]
JMFF050K18Sequence583007494 (3)ref|XP_009780813.1|292PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]561009858 (2)ref|XP_009780813.1|184PREDICTED: agmatine coumaroyltransferase-2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF003H06+                           GCTTCGAAACCACCCACATAAGAATCTCGGTNGACGGTCGTGC
                      ____________________________________________________________
consensus                              GCTTCGAAACCACCCACATAAGAATCTCGGTNGACGGTCGTGC
 
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rJMFF003H06+          ACGCCTTAACCCCAAAGTTCCCAACGACTATTTCGGCAACTTGGTTCTGTGGGCATTTCC
                      ____________________________________________________________
consensus             ACGCCTTAACCCCAAAGTTCCCAACGACTATTTCGGCAACTTGGTTCTGTGGGCATTTCC
 
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rJMFF003H06+          GACTGCCAAGGTTAAAGACTTACTGCGTGAGCCTCTTTCATACGCAGCTAAGCTCATCCA
                      ____________________________________________________________
consensus             GACTGCCAAGGTTAAAGACTTACTGCGTGAGCCTCTTTCATACGCAGCTAAGCTCATCCA
 
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rJMFF003H06+          CGACGCCGTTTCCAAGGTCAACAACAACTACATCAGATCGTTCATAGATTTCGCGAATTC
rJMFF050K18+                                                 GTTCATAGATTTCGCGAATTC
                      ____________________________________________________________
consensus             CGACGCCGTTTCCAAGGTCAACAACAACTACATCAGATCGTTCATAGATTTCGCGAATTC
 
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rJMFF003H06+          CAAGGTGGTCGCCGAGGAAGACGGCCTTGTTCCAACCGCGGACATGGACAAGCACATTCT
rJMFF050K18+          CAAGGTGGTCGCCGAGGAAGACGGCCTTGTTCCAACCGCGGACATGGACAAGCACATTCT
                      ____________________________________________________________
consensus             CAAGGTGGTCGCCGAGGAAGACGGCCTTGTTCCAACCGCGGACATGGACAAGCACATTCT
 
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rJMFF003H06+          CTGCCCTAACCTGGAAGTTGATAGCTGGCTAAGGTTCCCATTCTACGACTTGGATTTTGG
rJMFF050K18+          CTGCCCTAACCTGGAAGTTGATAGCTGGCTAAGGTTCCCATTTTACGACTTGGATTTTGG
                      ____________________________________________________________
consensus             CTGCCCTAACCTGGAAGTTGATAGCTGGCTAAGGTTCCCATTTTACGACTTGGATTTTGG
 
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rJMFF003H06+          AACTGGGTGTCCGTACATCTTCATGCCCACATTTTTCCCGACAGAAGGGATGATGTTTCT
rJMFF050K18+          AACTGGGTGTCCGTACATCTTCATGCCCACATTTTTCCCGACAGAAGGGATGATGTTTTT
                      ____________________________________________________________
consensus             AACTGGGTGTCCGTACATCTTCATGCCCACATTTTTCCCGACAGAAGGGATGATGTTTTT
 
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rJMFF003H06+          GCTTCCTTCCTTCATCGGAGATGGAAGCATCGATGCTTTTATTCCTCTATTCCAAGACAA
rJMFF050K18+          GCTTCCTTCCTTCATCGGAGATGGAATCATCGATGCTTTTATTCCTTTATTCCAAGACAA
                      ____________________________________________________________
consensus             GCTTCCTTCCTTCATCGGAGATGGAATCATCGATGCTTTTATTCCTTTATTCCAAGACAA
 
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rJMFF003H06+          CTTGCCAACCTTCAAGCAGATTTGCTATTCTCTTGACTGAACGGGTAAATTAATGTTAAA
rJMFF050K18+          CTTGCCAACCTTCAAGCAGATTTGCTATTTTCTTGACTGAACGGGTAAATTAATGTTAAA
                      ____________________________________________________________
consensus             CTTGCCAACCTTCAAGCAGATTTGCTATTTTCTTGACTGAACGGGTAAATTAATGTTAAA
 
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rJMFF003H06+          GACATAAAACCTTAAAGTTTTGCCTAATTTGAATTGATAGGAAAATTTACTTTACTGTGC
rJMFF050K18+          GACATAAAACCTTAAAGTTTTGCCTAATTTGAATTGATAGGAAAATTTACTTTACTGTGC
                      ____________________________________________________________
consensus             GACATAAAACCTTAAAGTTTTGCCTAATTTGAATTGATAGGAAAATTTACTTTACTGTGC
 
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rJMFF003H06+          TCTACTTTTCCAGACAAATACTATATTCCATCCCCAAGTTGTTAAGTTGCTACCTTTTAT
rJMFF050K18+          TCTACTTTTCCAGACAAATACTATATTCCATCCCCAAGTTGTTAAGTTGCTACGTTTTAT
                      ____________________________________________________________
consensus             TCTACTTTTCCAGACAAATACTATATTCCATCCCCAAGTTGTTAAGTTGCTACGTTTTAT
 
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rJMFF003H06+          TTTTCAACTATAATCTTTGTGATTATCATCATGTATACATGTAATCTTTCAGTTCTATAA
rJMFF050K18+          TTTTCAACTATAATCTTTGTGATTATCATCATGTATACATGTAATCTTTCAGTTCTATAA
                      ____________________________________________________________
consensus             TTTTCAACTATAATCTTTGTGATTATCATCATGTATACATGTAATCTTTCAGTTCTATAA
 
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rJMFF003H06+          AGTCAA                                                      
rJMFF050K18+          AGTCAAAGGCGTTCTATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus             AGTCAAAGGCGTTCTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT