Contig 009854:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010D06Sequence464006566 (10)gb|EPS73232.1|2e-38hypothetical protein M569_01523 [Genlisea aurea]808009854 (6)ref|XP_009776176.1|3e-102PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMFF050D11Sequence615006566 (10)gb|EPS73232.1|2e-74hypothetical protein M569_01523 [Genlisea aurea]644009854 (6)ref|XP_009776176.1|3e-56PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF008D18Sequence297006566 (10)772009854 (6)ref|XP_009776176.1|3e-105PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF022O16Sequence630006566 (10)gb|EPS73232.1|6e-78hypothetical protein M569_01523 [Genlisea aurea]750009854 (6)ref|XP_009776176.1|1e-86PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF029E06Sequence662006566 (10)gb|EPS73232.1|2e-68hypothetical protein M569_01523 [Genlisea aurea]735009854 (6)ref|XP_009776176.1|1e-88PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF032C12Sequence662006566 (10)gb|EPS73232.1|4e-80hypothetical protein M569_01523 [Genlisea aurea]729009854 (6)ref|XP_009776176.1|4e-88PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+                                                             AGCTTGGCT
rJMFF010D06+                                           AAANCCAAAATGCCAGGNAGCTTGGCT
                      ____________________________________________________________
consensus                                              AAANCCAAAATGCCAGGNAGCTTGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          ATGACATTGATGGGAAGGAATTTGATGACTTATTTTGGCGTTTTAAATCTGTGGCTGAAA
rJMFF010D06+          ATGACATTGATGGGAAGGAATTTGATGACTTATTTTGGCGTTTTAAATCTGTGGCTGAAA
rJMSF032C12+                                                                CTGAAA
rJMSF029E06+                                                               GCTGAAA
rJMSF022O16+                                                                CTGAAA
                      ____________________________________________________________
consensus             ATGACATTGATGGGAAGGAATTTGATGACTTATTTTGGCGTTTTAAATCTGTGGCTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          AGAAAAAGAAAATTACAGATGATGACCTAATTGCGCTCATATCAGATGAAGTTTTCCAGC
rJMFF010D06+          AGAAAAAGGAAATTACAGATGATGACNTAATTGCGCTCATATCAGATGAAGTTTTCCAGC
rJMSF032C12+          AGAAAAAGAAAATTACAGATGATGACCTAATTGCGCTCATATCAGATGAAGTTTTCCAGC
rJMSF029E06+          AGAAAAAGAAAATTACAGATGATGACCTAATTGCGCTCATATCAGATGAAGTTTTCCAGC
rJMSF022O16+          AGGAAAAGAAAATTACAGATGATGACCTATTTGCGCTCATATCAGATGAAGTTTTCCAGC
                      ____________________________________________________________
consensus             AGAAAAAGAAAATTACAGATGATGACCTAATTGCGCTCATATCAGATGAAGTTTTCCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          CACAGCTTGTTTGGAAACTTGGAGATTTACAGGTGACATGTGGCTCACTTGGCCTTTCTA
rJMFF010D06+          CACAGCTTGTTTGGAAACTTGGAGATTTACAGGTGACATGTGGCTCACTTGGCCTTTCTA
rJMSF032C12+          CACAGCTTGTTTGGAAACTTGGAGATTTACAGGTGACATGTGGCTCACTTGGCCTTTCTA
rJMSF029E06+          CACAGCTTGTTTGGAAACTTGGAGATTTACAGGTGACATGTGGCTCACTTGGCCTTTCTA
rJMSF022O16+          CACAGCTTGTTTGGAAACTTGGAGATTTACAGGTGACATGTGGCTCACTTGGCCTTTCTA
                      ____________________________________________________________
consensus             CACAGCTTGTTTGGAAACTTGGAGATTTACAGGTGACATGTGGCTCACTTGGCCTTTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          CTGCAACTGTTAAGCTCATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
rJMFF010D06+          CTGCAACTGTTAAGCTCATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
rJMSF032C12+          CTGCAACTGTTAAGCTCATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
rJMSF029E06+          CTGCAACTGTTAAGCTCATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
rJMSF022O16+          CTGCAACTGTTAAGCTCATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
rJMFF050D11+                          CATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
                      ____________________________________________________________
consensus             CTGCAACTGTTAAGCTCATTGATGCCGACGATGAAGAACATGTTGCTTGTTCTGTTGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
rJMFF010D06+          CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
rJMSF032C12+          CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
rJMSF029E06+          CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
rJMSF022O16+          CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
rJMFF050D11+          CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
                      ____________________________________________________________
consensus             CAGGGCCCGTTGATGCAGCTTATAAGGCAGTTGATCTCCTCGTAAAGGTACCTGTGACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
rJMFF010D06+          TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
rJMSF032C12+          TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
rJMSF029E06+          TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
rJMSF022O16+          TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
rJMFF050D11+          TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
                      ____________________________________________________________
consensus             TCCTCGAGTATTCCTTGACTGCAGTTACAGAAGGTATTGATGCCATAGCCAGCACCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
rJMFF010D06+          TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
rJMSF032C12+          TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
rJMSF029E06+          TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
rJMSF022O16+          TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
rJMFF050D11+          TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
                      ____________________________________________________________
consensus             TTTTGATTCGCGGGGATAACAGCCACACATCAACCCATGCTTTAACTGGAAACGTTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
rJMFF010D06+          ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
rJMSF032C12+          ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
rJMSF029E06+          ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
rJMSF022O16+          ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
rJMFF050D11+          ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
                      ____________________________________________________________
consensus             ATCGTACATTTAGTGGGACTGGTGCCGGTATGGATATTGTAATCTCCAGTGTTCGAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
rJMFF010D06+          ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
rJMSF032C12+          ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
rJMSF029E06+          ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
rJMSF022O16+          ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
rJMFF050D11+          ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
                      ____________________________________________________________
consensus             ATGTTGGTGCCTTGAACAAGATGTTAAGTTTCACAACCCTAGTTTCAAGATATAATAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
rJMFF010D06+          CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
rJMSF032C12+          CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
rJMSF029E06+          CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
rJMSF022O16+          CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
rJMFF050D11+          CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
                      ____________________________________________________________
consensus             CCGAAGATAATGTAGTTGCCAAGTGAGGTGATTGCGGAGAAAAGAAATAGTTACAATGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
rJMFF010D06+          GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
rJMSF032C12+          GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
rJMSF029E06+          GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
rJMSF022O16+          GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
rJMFF050D11+          GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
                      ____________________________________________________________
consensus             GTTGCAGCTTTATCAATTGCAGAACAAGCATGGAACATAGAGACAGTATTCAGATCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
rJMFF010D06+          TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
rJMSF032C12+          TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
rJMSF029E06+          TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
rJMSF022O16+          TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
rJMFF050D11+          TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
                      ____________________________________________________________
consensus             TGGGAGATTCTGTAAATTCTCTTGCTTGTATTTTATTTGAAAAGGTGTGTTGTGTGGTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008D18+          AAGGTTGGTGTCAACTAACTTACAGAATACTTTA                          
rJMFF010D06+          AAGGTTGGTGTCAACTAACTTACAGAATACTTTATTACCTAATAATTTGT          
rJMSF032C12+          AAGGTTGGTGTCAACTAACTTACAGAATACTTTATTACCTAATAATTTGTTGCATCAGAA
rJMSF029E06+          AAGGTTGGTGTCAACTAACTTACAGAATACTTTATTACCTAATAATTTGTTGCATCAGAA
rJMSF022O16+          AAGGTTGGTGTCAACTAACTTACAGAATACTTTATTACCTAATAATTTGTTGCATCAGAA
rJMFF050D11+          AAGGTTGGTGTCAACTAACTTACAGAATACTTTATTACCTAATAATTTGTTGCATCAGAA
                      ____________________________________________________________
consensus             AAGGTTGGTGTCAACTAACTTACAGAATACTTTATTACCTAATAATTTGTTGCATCAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032C12+          AAT                                                         
rJMSF029E06+          AAT                                                         
rJMSF022O16+          AATGATAGTTTATTCGTGCA                                        
rJMFF050D11+          AATGATAGTTTATTCGTGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AATGATAGTTTATTCGTGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG