Contig 009845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022M06Sequence714009845 (5)ref|XP_009790378.1|2e-142PREDICTED: phosphoinositide phospholipase C 4 [Nicotiana sylvestris]
JMFF049F05Sequence611009845 (5)emb|CAA65127.1|3e-82phosphoinositide-specific phospholipase C [Nicotiana rustica]
JMFN003D11Sequence631009845 (5)emb|CAA65127.1|3e-89phosphoinositide-specific phospholipase C [Nicotiana rustica]
JMSF016N02Sequence237015715790009845 (5)ref|XP_009790378.1|6e-142PREDICTED: phosphoinositide phospholipase C 4 [Nicotiana sylvestris]
JMSF052J22Sequence638021204ref|XP_009622729.1|7e-105PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tomentosiformis] 858009845 (5)ref|XP_009790378.1|1e-140PREDICTED: phosphoinositide phospholipase C 4 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF052J22+                                                 AAAGGNCCACCGATACTAATG
                      ____________________________________________________________
consensus                                                    AAAGGNCCACCGATACTAATG
 
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rJMSF016N02+                           TTTCACGCAGAGNAATATCCTCAGGGTTTATCCTAAGGGTACT
rJMFF022M06+          GGACAGATGTTGTCAG-TTTCACGCAGAGAAATATCCTCAGGGTTTATCTTAAGGGTACT
rJMSF052J22+          GGACAGATGTTGTCAGTTTTCACGCAGAGAAATATCCTCAGGGTTTATCCTAAGGGTACT
                      ____________________________________________________________
consensus             GGACAGATGTTGTCAGTTTTCACGCAGAGAAATATCCTCAGGGTTTATCCTAAGGGTACT
 
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rJMSF016N02+          CGATTTAACTCCTCAAACTATAAGCCACTAATTGGTTGGATGCATGGCGCTCAGATGGTT
rJMFF022M06+          CGATTTAACTCCTCAAACTATAAGCCACTAATTGGTTGGATGCATGGCGCTCAGATGGTT
rJMSF052J22+          CGATTTAACTCCTCAAACTATAAGCCACTAATTGGTTGGATGCATGGCGCTCAGATGGTT
                      ____________________________________________________________
consensus             CGATTTAACTCCTCAAACTATAAGCCACTAATTGGTTGGATGCATGGCGCTCAGATGGTT
 
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rJMSF016N02+          GCATTTAACATGCAGGGATATGGCAGATCTCTATGGCTGATGCAAGGGATGTTCAGATCA
rJMFF022M06+          GCATTTAACATGCAGGGATATGGCAGATCTCTATGGCTGATGCAAGGGATGTTCAGATCA
rJMSF052J22+          GCATTTAACATGCAGGGATATGGCAGATCTCTATGGCTGATGCAAGGGATGTTCAGATCA
                      ____________________________________________________________
consensus             GCATTTAACATGCAGGGATATGGCAGATCTCTATGGCTGATGCAAGGGATGTTCAGATCA
 
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rJMSF016N02+          AATGGAGGGTGTGGTTATGTTAAAAAGCCTGATTTATTAATGAATGTCGGTCCAAATTGT
rJMFF022M06+          AATGGAGGGTGTGGTTATGTTAAAAAGCCTGATTTATTAATGAATGTCGGTCCAAATTGT
JMFN003D11-                                   AAGCCTGATTTATTAATGAATGTCGGTCCAAATTGT
rJMSF052J22+          AATGGAGGGTGTGGTTATGTTAAAAAGCCTGATTTATTAATGAATGTCGGTCCAAATTGT
rJMFF049F05+                                                           GTCCAAATTGT
                      ____________________________________________________________
consensus             AATGGAGGGTGTGGTTATGTTAAAAAGCCTGATTTATTAATGAATGTCGGTCCAAATTGT
 
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rJMSF016N02+          GAGGTCTTCAATCCTAAAACGAGGTTGCATGTGAAGAAAACCTTAAAAGTGAAAGTATAC
rJMFF022M06+          GAGGTCTTCAATCCTAAAACGAGGTTGCATGTGAAGAAAACCTTAAGAGTGAAAGTATAC
JMFN003D11-           GAGGTCTTCAATCCTAAAACGAGGTTGCATGTGAAGAAAACCTTAAAAGTGAAAGTATAC
rJMSF052J22+          GAGGTCTTCAATCCTAAAACGAGGTTGCATGTGAAGAAAACCTTAAAAGTGAAAGTATAC
rJMFF049F05+          GAGGTCTTCAATCCTAAAACGAGGTGGCATGTGAAGAAAACCTTAAGAGTGAAAGTATAC
                      ____________________________________________________________
consensus             GAGGTCTTCAATCCTAAAACGAGGTTGCATGTGAAGAAAACCTTAAAAGTGAAAGTATAC
 
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rJMSF016N02+          ATGGGAGATGGATGGCATTTAGACTTTAAGCAAACTCACTTTGATTCATATTCCCCACCT
rJMFF022M06+          ATGGGAGATGGATGGCATTTAGACTTTAAGCAAACTCACTTTGATTCATATTCCCCACCT
JMFN003D11-           ATGGGAGATGGATGGCATTTAGACTTTAAGCAAACTCACTTTGATTCATATTCCCCACCT
rJMSF052J22+          ATGGGAGATGGATGGCATTTAGACTTTAAGCAAACTCACTTTGATTCATATTCCCCACCT
rJMFF049F05+          ATGGGAGATGGATGGCATTTAGACTTTAAGCAAACTCACTTTGATTCATATTCCCCACCT
                      ____________________________________________________________
consensus             ATGGGAGATGGATGGCATTTAGACTTTAAGCAAACTCACTTTGATTCATATTCCCCACCT
 
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rJMSF016N02+          GACTTTTACACAAGGGTTGGGATTGCTGGAGTGCCTGCTGATGAGGTGATGAAGAAGACG
rJMFF022M06+          GACTTTTACACAAGGGTTGGGATTGCTGGAGTGCCTGCTGATGAGGTGATGAAGAAGACG
JMFN003D11-           GACTTTTACACAAGGGTTGGGATTGCTGGAGTGCCTGCTGATGAGGTGATGAAGAAGACG
rJMSF052J22+          GACTTTTACACAAGGGTTGGGATTGCTGGAGTGCCTGCTGATGAGGTGATGAAGAAGACG
rJMFF049F05+          GACTTTTACACAAGGGTTGGGATTGCTGGAGTGCCTGCTGATGAGGTGATGAAGAAGACG
                      ____________________________________________________________
consensus             GACTTTTACACAAGGGTTGGGATTGCTGGAGTGCCTGCTGATGAGGTGATGAAGAAGACG
 
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rJMSF016N02+          AAGATAAAAGAAGATAACTGGACACCGGTTTGGGGAGAAGAGTTTATGTTCCCATTGACT
rJMFF022M06+          AAGATAAAAGAAGATAACTGGACACCGGTTTGGGGAGAAGAGTTTATGTTCCCATTGACT
JMFN003D11-           AAGATAAAAGAAGATAACTGGACACCGGTTTGGGGAGAAGAGTTTATGTTCCCATTGACT
rJMSF052J22+          AAGATAAAAGAAGATAACTGGACACCGGTTTGGGGAGAAGAGTTTATGTTCCCATTGACT
rJMFF049F05+          AAGATAAAAGAAGATAACTGGACACCGGTTTGGGGAGAAGAGTTTATGTTCCCATTGACT
                      ____________________________________________________________
consensus             AAGATAAAAGAAGATAACTGGACACCGGTTTGGGGAGAAGAGTTTATGTTCCCATTGACT
 
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rJMSF016N02+          GTCCCCGAGCTAGCCTTGCTGCGAATTGAAGTGCACGAGCATGATTTGTCTGAGAAGGAC
rJMFF022M06+          GTCCCCGAGCTAGCCTTGCTGCGAATTGAAGTGCACGAGCATGATTTGTCTGAGAAGGAC
JMFN003D11-           GTCCCCGAGCTAGCCTTGCTGCGAATTGAAGTGCACGAGCATGATTTGTCTGAGAAGGAC
rJMSF052J22+          GTCCCCGAGCTAGCCTTGCTGCGAATTGAAGTGCACGAGCATGATTTGTCTGAGAAGGAC
rJMFF049F05+          GTCCCCGAGCTAGCCTTGCTGCGAATTGAAGTGCACGAGCATGATTTGTCTGAGAAGGAC
                      ____________________________________________________________
consensus             GTCCCCGAGCTAGCCTTGCTGCGAATTGAAGTGCACGAGCATGATTTGTCTGAGAAGGAC
 
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rJMSF016N02+          GATTTTGCAGGCCAAACGTGTTTACCTGTTGCAGAGTTGAGACCGGGCATTCGAGCTGTT
rJMFF022M06+          GATTTTGCAGGCCAAACGTGTTTACCTGTTGCAGAGTTGAGACCGGGCATTCGAGCTGTT
JMFN003D11-           GATTTTGCAGGCCAAACGTGTTTACCTGTTGCAGAGTTGAGACCGGGCATTCGAGCTGTT
rJMSF052J22+          GATTTTGCAGGCCAAACGTGTTTACCTGTTGCAGAGTTGAGACCGGGCATTCGAGCTGTT
rJMFF049F05+          GATTTTGCAGGCCAAACGTGTTTACCTGTTGCAGAGTTGAGACCGGGCATTCGAGCTGTT
                      ____________________________________________________________
consensus             GATTTTGCAGGCCAAACGTGTTTACCTGTTGCAGAGTTGAGACCGGGCATTCGAGCTGTT
 
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rJMSF016N02+          CCCCTCTGTGATCGCAAAGGAGAGAAGTACAATTCAGTGAGGCTTCTGATGCGCTTCGAG
rJMFF022M06+          CCCCTCTGTGATCGCAAAGGAGAGAAGTACAATTCAGTGAGGCTTCTGATGCGCTTCGAG
JMFN003D11-           CCCCTCTGTGATCGCAAAGGAGAGAAGTACAATTCAGTGAGGCTTCTGATGCGCTTCGAG
rJMSF052J22+          CCCCTCTGTGATCGCAAAGGAGAGAAGTACAATTCAGTGAGGCTTCTGATGCGCTTCGAG
rJMFF049F05+          CCCCTCTGTGATCGCAAAGGAGAGAAGTACAATTCAGTGAGGCTTCTGATGCGCTTCGAG
                      ____________________________________________________________
consensus             CCCCTCTGTGATCGCAAAGGAGAGAAGTACAATTCAGTGAGGCTTCTGATGCGCTTCGAG
 
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rJMSF016N02+          TTTGTTTAATGTACTGTTTCTTTTCATCCATATTTCACGCAACAATTTCATTAGACCATG
rJMFF022M06+          TTTGTTTANTGTACTGTTTNTTNTCATCCATATTTCACGCAACAATTTCAT         
JMFN003D11-           TTTGTTTAATGTACTGTTTCTTTTCATCCATATTTCACGCAACAATTTCATTAGACCATG
rJMSF052J22+          TTTGTTTAATGTACTGTTTCTTTTCATCCATATTTCACGCAACAATTTCATTAGACCATG
rJMFF049F05+          TTTGTTTAATGTACTGTTTCTTTTCATCCATATTTCACGCAACAATTTCATTAGACCATG
                      ____________________________________________________________
consensus             TTTGTTTAATGTACTGTTTCTTTTCATCCATATTTCACGCAACAATTTCATTAGACCATG
 
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rJMSF016N02+          TTTTGAATTGTGTGTTGTCTTAGGATCAAGAGGCGTGTTTTTGTGTTTTTTCTTTTGGTT
JMFN003D11-           TTTTGAATTGTGTGTTGTCTTAGGATCAAGAGGCGTGTTTTTGTGTTTTTTCTTTTGGTT
rJMSF052J22+          TTTTGAATTGTGTGTTGTCTTAGGATCAAGAGGCGTGTTTTTGTGTTTTTTCTTTTGGTT
rJMFF049F05+          TTTTGAATTGTGTGTTGTCTTAGGATCAAGAGGCGTGTTTTTGTGTTTTTTCTTTTGGTT
                      ____________________________________________________________
consensus             TTTTGAATTGTGTGTTGTCTTAGGATCAAGAGGCGTGTTTTTGTGTTTTTTCTTTTGGTT
 
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rJMSF016N02+          CAGAACAGAAT                                                 
JMFN003D11-           CAGAACAGAATCTTGTGATTTTCCATGGCATAATGATATTTATGAGTGCTGCTTG     
rJMSF052J22+          CAGAACAGAATCTTGTGATTTTCCATGGCATAATGATATTTATGAGTGCTGCTTG     
rJMFF049F05+          CAGAACAGAATCTTGTGATTTTCCATGGCATAATGATATTTATGAGTGCTGCTTGTGTAC
                      ____________________________________________________________
consensus             CAGAACAGAATCTTGTGATTTTCCATGGCATAATGATATTTATGAGTGCTGCTTGTGTAC