Contig 009833:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048H18Sequence489001939 (7)ref|XP_004238035.1|79.7PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum]431009833 (2)ref|XP_008353967.1|57.4PREDICTED: uncharacterized protein LOC103417568 [Malus domestica]
JMSF018O11Sequence454001939 (7)ref|XP_004238035.1|108PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum]734009833 (2)ref|XP_004238035.1|357PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF018O11+                                      CTGAGAATTCAGCTCGATTTTGCTTCCGGCTC
                      ____________________________________________________________
consensus                                         CTGAGAATTCAGCTCGATTTTGCTTCCGGCTC
 
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rJMSF018O11+          CGATCCGGCTGAGGTGGCAGCCGTGTATTCCTACAACGGGCGGCCGGCTGTTCTCAACCC
                      ____________________________________________________________
consensus             CGATCCGGCTGAGGTGGCAGCCGTGTATTCCTACAACGGGCGGCCGGCTGTTCTCAACCC
 
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rJMSF018O11+          CAGCTCAATCCGGCTGGGCGATCTATACGCCGAGGAGGAAAGGGAATTACTCGTGGAAGT
                      ____________________________________________________________
consensus             CAGCTCAATCCGGCTGGGCGATCTATACGCCGAGGAGGAAAGGGAATTACTCGTGGAAGT
 
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rJMSF018O11+          TAGGGTTCCGTCAATGGCCGTTGGGTCCCACCACGTGTTGTCGTTTAGATGCTGTTACAA
                      ____________________________________________________________
consensus             TAGGGTTCCGTCAATGGCCGTTGGGTCCCACCACGTGTTGTCGTTTAGATGCTGTTACAA
 
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rJMSF018O11+          AGACCCCGCCACGCAGGAGTTAGTCAATGGGAGAGAGCATGCACTGTTGGTGCCAAGGCC
                      ____________________________________________________________
consensus             AGACCCCGCCACGCAGGAGTTAGTCAATGGGAGAGAGCATGCACTGTTGGTGCCAAGGCC
 
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rJMSF018O11+          ACAAGCCGTTCGATCATCTTCACCCAGGATCGAAAGGCTGAGAAATCTTTTCATTACCAC
                      ____________________________________________________________
consensus             ACAAGCCGTTCGATCATCTTCACCCAGGATCGAAAGGCTGAGAAATCTTTTCATTACCAC
 
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rJMSF018O11+          CCGAGCAATCGCGGAGTCCCGGCGATTAATTGAGCATAACGAGTTGACTAGCGCCATGCA
                      ____________________________________________________________
consensus             CCGAGCAATCGCGGAGTCCCGGCGATTAATTGAGCATAACGAGTTGACTAGCGCCATGCA
 
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rJMSF018O11+          TCTGTTGTCATCGGCGCGGGCTCTGCTCATCCAATCCGGCTCGTGTTACGTGGACGAGTA
                      ____________________________________________________________
consensus             TCTGTTGTCATCGGCGCGGGCTCTGCTCATCCAATCCGGCTCGTGTTACGTGGACGAGTA
 
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rJMSF018O11+          CGTGAGAGGATTGGAAGCGGAGTTAACGGAAGTGCAATTAAGGAAGCAATATCAACAGCA
                      ____________________________________________________________
consensus             CGTGAGAGGATTGGAAGCGGAGTTAACGGAAGTGCAATTAAGGAAGCAATATCAACAGCA
 
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rJMSF018O11+          GATGGAGCAGCAGAAGGTAATCCAACGGCAGAGATCGTTCGAGAGAGAAACGGGCGTCTT
                      ____________________________________________________________
consensus             GATGGAGCAGCAGAAGGTAATCCAACGGCAGAGATCGTTCGAGAGAGAAACGGGCGTCTT
 
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rJMSF018O11+          CTTGGATGAAAACGGGGAGCCACTCACGCCAACCTCGGCTTGGAGAGCGGCTGAGAAACT
rJMFF048H18+                                                           GCTGAGAAACT
                      ____________________________________________________________
consensus             CTTGGATGAAAACGGGGAGCCACTCACGCCAACCTCGGCTTGGAGAGCGGCTGAGAAACT
 
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rJMSF018O11+          GGCTAAGGTAGCCATGATGAAGAAGTCGATGAGTAGAGTCAGCGACTTACACGGATTTGA
rJMFF048H18+          GGCTAAGGTAGCCACTATGAAGAAGTCGATGAGTAGAGTCAGCGACTTACACGGATTTGA
                      ____________________________________________________________
consensus             GGCTAAGGTAGCCATTATGAAGAAGTCGATGAGTAGAGTCAGCGACTTACACGGATTTGA
 
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rJMSF018O11+          AAATGCTAGATTTTAATTTTAATATTTAAATTAGAATTTTAC                  
rJMFF048H18+          AAATGCTAGATTTTAATTTTAATATTTAAATTAGAATTTTACTGTATTTTATATTTGCCA
                      ____________________________________________________________
consensus             AAATGCTAGATTTTAATTTTAATATTTAAATTAGAATTTTACTGTATTTTATATTTGCCA
 
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rJMFF048H18+          AAAGAAAAAGGGAGAGTAATGTTCCATGGGCCACTTCATCTAATGGCGACAGTTCTTAAG
                      ____________________________________________________________
consensus             AAAGAAAAAGGGAGAGTAATGTTCCATGGGCCACTTCATCTAATGGCGACAGTTCTTAAG
 
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rJMFF048H18+          GCGGCCAGCCCTTTTCTGCAGTGTGGCCCAATGGGCCAGGCCCACACATCATTGACTGAT
                      ____________________________________________________________
consensus             GCGGCCAGCCCTTTTCTGCAGTGTGGCCCAATGGGCCAGGCCCACACATCATTGACTGAT
 
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rJMFF048H18+          TGCAGGTCCATATCTTTGCCTTAGCTCCCAAGAGAGAGAGAGAGAGAGAGAGAGAGATTT
                      ____________________________________________________________
consensus             TGCAGGTCCATATCTTTGCCTTAGCTCCCAAGAGAGAGAGAGAGAGAGAGAGAGAGATTT
 
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rJMFF048H18+          GCTTTTGTATGGAACAACCTTATAAAATGAATTGAATGAAAATTATGTAAATTCAATTCT
                      ____________________________________________________________
consensus             GCTTTTGTATGGAACAACCTTATAAAATGAATTGAATGAAAATTATGTAAATTCAATTCT
 
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rJMFF048H18+          CCTGAAAGTGTTGTTAATCTGAGGTGCTTGTATTTATTGATAATAACAAGTTTTAGTTGT
                      ____________________________________________________________
consensus             CCTGAAAGTGTTGTTAATCTGAGGTGCTTGTATTTATTGATAATAACAAGTTTTAGTTGT