clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF015I23 | Sequence | 493 | 004555 (9) | ref|XP_006343543.1| | 2e-49 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 704 | 009826 (7) | gb|EYU42442.1| | 1e-106 | hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU |
JMFF024G21 | Sequence | 462 | 004555 (9) | ref|XP_006343543.1| | 6e-41 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 825 | 009826 (7) | ref|XP_006343543.1| | 1e-107 | PREDICTED: xylose isomerase-like [Solanum tuberosum] |
JMFF047G23 | Sequence | 422 | 004555 (9) | ref|XP_006343543.1| | 8e-33 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 383 | 009826 (7) | ref|XP_006343543.1| | 5e-22 | PREDICTED: xylose isomerase-like [Solanum tuberosum] |
JMSF013D20 | Sequence | 440 | 004555 (9) | ref|XP_006343543.1| | 3e-61 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 785 | 009826 (7) | ref|XP_006343543.1| | 3e-111 | PREDICTED: xylose isomerase-like [Solanum tuberosum] |
JMSF015D02 | Sequence | 407 | 004555 (9) | ref|XP_006343543.1| | 1e-55 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 736 | 009826 (7) | gb|EYU42442.1| | 2e-128 | hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU |
JMSF034L06 | Sequence | 626 | 004555 (9) | ref|XP_006343543.1| | 5e-104 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 721 | 009826 (7) | gb|EYU42442.1| | 3e-128 | hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU |
JMSF044I14 | Sequence | 800 | 004555 (9) | ref|XP_006343543.1| | 5e-103 | PREDICTED: xylose isomerase-like [Solanum tuberosum] | 752 | 009826 (7) | gb|EYU42442.1| | 5e-134 | hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU |
This contig is upended
. : . : . : . : . : . :
rJMSF013D20+ GCTGAACCATTTGCCAGATTCATGGAAGCTGCT
rJMFF024G21+ CT
____________________________________________________________
consensus GCTGAACCATTTGCCAGATTCATGGAAGCTGCT
. : . : . : . : . : . :
rJMSF013D20+ GTTGCTTATAAGAAAAAGATTGGATTTAAAGGAACATTGTTCATTGAGCCTAAGCCTCAG
rJMSF015D02+ TCAG
rJMSF044I14+ TTCATTGAGCCTAAGCCTCAG
rJMFF024G21+ GTTGCTTATAAGAAAAAGATTGGATTTAAAGGAACATTGTTCATTGAGCCTAAGCCTCAG
____________________________________________________________
consensus GTTGCTTATAAGAAAAAGATTGGATTTAAAGGAACATTGTTCATTGAGCCTAAGCCTCAG
. : . : . : . : . : . :
rJMSF013D20+ GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMSF034L06+ ACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMSF015D02+ GGACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMSF044I14+ GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMFF024G21+ GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
____________________________________________________________
consensus GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
. : . : . : . : . : . :
rJMSF013D20+ AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMSF034L06+ AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMSF015D02+ AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMSF044I14+ AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMFF024G21+ AATGGGCTTATAGATGAGTTCA-----AATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMFF015I23+ AATATTGAATGCAACCATGCCACTCTGTCTGGT
____________________________________________________________
consensus AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
. : . : . : . : . : . :
rJMSF013D20+ CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMSF034L06+ CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMSF015D02+ CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMSF044I14+ CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMFF024G21+ CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMFF015I23+ CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
____________________________________________________________
consensus CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
. : . : . : . : . : . :
rJMSF013D20+ GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMSF034L06+ GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMSF015D02+ GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMSF044I14+ GCAAACAGCGGCGATCCTCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMFF024G21+ GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMFF015I23+ GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
____________________________________________________________
consensus GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
. : . : . : . : . : . :
rJMSF013D20+ GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMSF034L06+ GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMSF015D02+ GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMSF044I14+ GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMFF024G21+ GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMFF015I23+ GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
____________________________________________________________
consensus GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
. : . : . : . : . : . :
rJMSF013D20+ AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMSF034L06+ AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMSF015D02+ AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMSF044I14+ AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMFF024G21+ AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMFF015I23+ AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
____________________________________________________________
consensus AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
. : . : . : . : . : . :
rJMSF013D20+ ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMSF034L06+ ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMSF015D02+ ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMSF044I14+ ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMFF024G21+ ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMFF015I23+ ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMFF047G23+ AAGCGCTGCAAAGCTGATCGAGGAT
____________________________________________________________
consensus ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
. : . : . : . : . : . :
rJMSF013D20+ GGTTCTCTGAAGGAACT--TTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMSF034L06+ GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMSF015D02+ GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMSF044I14+ GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMFF024G21+ GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMFF015I23+ GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMFF047G23+ GGTTCTCTGAAGGAACTT-TTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
____________________________________________________________
consensus GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
. : . : . : . : . : . :
rJMSF013D20+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMSF034L06+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMSF015D02+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMSF044I14+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMFF024G21+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMFF015I23+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMFF047G23+ GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
____________________________________________________________
consensus GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
. : . : . : . : . : . :
rJMSF013D20+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMSF034L06+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMSF015D02+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMSF044I14+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMFF024G21+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMFF015I23+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMFF047G23+ GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
____________________________________________________________
consensus GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
. : . : . : . : . : . :
rJMSF013D20+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMSF034L06+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMSF015D02+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMSF044I14+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMFF024G21+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMFF015I23+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMFF047G23+ TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
____________________________________________________________
consensus TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
. : . : . : . : . : . :
rJMSF013D20+ CTATTAGCCATAATGACAGACAAGAC
rJMSF034L06+ CTATTAGCCATAATGACAGACAAGAC
rJMSF015D02+ CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
rJMSF044I14+ CTATTAGCCATAATGACAGACAAGACCAGTGTTTTAGTGTCGCATTC
rJMFF024G21+ CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
rJMFF015I23+ CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
rJMFF047G23+ CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
____________________________________________________________
consensus CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
. : . : . : . : . : . :
rJMSF015D02+ CAAATACTCTACT
rJMFF024G21+ CAAATACTCTACTTTCTACTCTAATAAATTATACCCC
rJMFF015I23+ CAAATACTCTACTTTCTACTCTAATAAATTATACCCC
rJMFF047G23+ CAAATACTCTACTTTCTACTCTAATAAATTATACCCCTATATTATATTTTACGCCAAAAT
____________________________________________________________
consensus CAAATACTCTACTTTCTACTCTAATAAATTATACCCCTATATTATATTTTACGCCAAAAT