Contig 009825:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002I05Sequence538011556 (9)ref|XP_009782446.1|2e-89PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]676009825 (11)ref|XP_004229835.1|7e-83PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMFF008C15Sequence553011556 (9)ref|XP_009782446.1|5e-83PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]707009825 (11)ref|XP_004229835.1|1e-88PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMFF017J03Sequence614011556 (9)ref|XP_009782446.1|2e-110PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]745009825 (11)ref|XP_004229835.1|3e-100PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMFF021I23Sequence601011556 (9)ref|XP_009782446.1|5e-94PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]671009825 (11)ref|XP_004229835.1|2e-83PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMFF026H05Sequence516011556 (9)ref|XP_009782446.1|3e-72PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]721009825 (11)ref|XP_004229835.1|1e-93PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMFF026O23Sequence580011556 (9)ref|XP_009782446.1|1e-81PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]700009825 (11)ref|XP_004229835.1|4e-96PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMFF047F17Sequence628011556 (9)ref|XP_009782446.1|2e-113PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]652009825 (11)gb|KDP28684.1|2e-67hypothetical protein JCGZ_14455 [Jatropha curcas]
JMFN035B06Sequence240009825 (11)
JMSF001A15Sequence181011556 (9)ref|XP_006445146.1|3e-08hypothetical protein CICLE_v10020177mg [Citrus clementina] ref|XP_006491018.1| P724009825 (11)ref|XP_004229835.1|7e-103PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMSF029I07Sequence660011556 (9)ref|XP_009782446.1|8e-123PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]664009825 (11)ref|XP_004229835.1|1e-81PREDICTED: COP9 signalosome complex subunit 1 [Solanum lycopersicum]
JMSF039O09Sequence682015819ref|XP_009782446.1|4e-105PREDICTED: COP9 signalosome complex subunit 1 [Nicotiana sylvestris]812009825 (11)ref|XP_006445146.1|7e-97hypothetical protein CICLE_v10020177mg [Citrus clementina] ref|XP_006491018.1| P

Alignment

This contig is upended


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rJMSF039O09+                                         AAACTTGCTGCTCGGAAGTTCTTGGAAGT
                      ____________________________________________________________
consensus                                            AAACTTGCTGCTCGGAAGTTCTTGGAAGT
 
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rJMSF039O09+          TGGTCAAGAACTAGCGAATGAGTACAATGAAGTAATTGCACCCCAAGATGTTGCAACATA
                      ____________________________________________________________
consensus             TGGTCAAGAACTAGCGAATGAGTACAATGAAGTAATTGCACCCCAAGATGTTGCAACATA
 
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rJMSF039O09+          TGGTGGCCTTTGTGCACTTGCAAGTTTTGATCGAGCAGAACTGAAGAGCAAAGTTATAGA
rJMSF001A15+                                                      AGAGCAAAGTTATAGA
rJMFF017J03+                                                      AGAGCAAAGTTATAGA
                      ____________________________________________________________
consensus             TGGTGGCCTTTGTGCACTTGCAAGTTTTGATCGAGCAGAACTGAAGAGCAAAGTTATAGA
 
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rJMSF039O09+          CAATGTTAACTTCAGAAATTTTTTAGAGTTGGTACCTGAGATTCGAGAACTTATCCAGGA
rJMFF026O23+                 AACTTCAGGAATTTTTTAGAGTTGGTACCTGAGGTGCGGGAACTTATCCAAGA
rJMSF001A15+          CAACATAAACTTCAGGAATTTTTTAGAGTTGGTACCTGAGGTGCGGGAACTTATCCAAGA
rJMFF017J03+          CAACATAAACTTCAGGAATTTTTTAGAGTTGGTACCTGAGGTGCGGGAACTTATCCAAGA
rJMFF026H05+                 AACTTCAGGAATTTTTTAGAGTTGGTACCTGAGGTGCGGGAACTTATCCAAGA
rJMFF021I23+                                                               TCCAAGA
rJMFF002I05+                                                              ATCCAAGA
rJMFF008C15+                               TTTAGAGTTGGTACCTGAGGTGCGGGAACTTATCCAAGA
                      ____________________________________________________________
consensus             CAACATAAACTTCAGGAATTTTTTAGAGTTGGTACCTGAGGTGCGGGAACTTATCCAAGA
 
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rJMSF039O09+          TTTCT--ACAAGTCGTTATGCATCATGTTTTGGGTATCTTGAAAACCTCAAAACAAACCT
rJMFF026O23+          TTTCTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMSF001A15+          TTTCTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMFF017J03+          TTTNTACACAAGTCATTATGCTTCGTGTNTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMFF026H05+          TTTNTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMFF021I23+          TTTCTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMSF029I07+              TACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMFF002I05+          TTTNTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
rJMFF008C15+          TTTNTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
                      ____________________________________________________________
consensus             TTTCTACACAAGTCATTATGCTTCGTGTCTTGAGTACTTAGGAAACTTGAAAGCAAACTT
 
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rJMSF039O09+          ATTGCTTGACATTCATTTGCATGACCATGTTGAGACGCTGTATAATCAAATCCGCAACAA
rJMFF026O23+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMSF001A15+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMFF017J03+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMFF026H05+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMFF021I23+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMSF029I07+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMFF002I05+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
rJMFF008C15+          ATTGCTCGACATCCATTTACATGACCATGTTGAGACNCTGTATAGTCAAATCCGTAACAA
rJMFF047F17+                  ACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
                      ____________________________________________________________
consensus             ATTGCTCGACATCCATTTACATGACCATGTTGAGACACTGTATAGTCAAATCCGTAACAA
 
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rJMSF039O09+          AGCTCTCATCCAATATACCCATCCCTTTGTCTCTGTTGATCTGCACATGATGGCCAATGC
rJMFF026O23+          AGCTNTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
rJMSF001A15+          AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
rJMFF017J03+          AGCTNTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
rJMFF026H05+          AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATNTGAACATGATGGCCAATGC
rJMFF021I23+          AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
rJMSF029I07+          AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACNTGATGGCCAATGC
rJMFF002I05+          AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
rJMFF008C15+          AGCTNTCATACAGTACACGCATCCCTTTGTCTCTGTTGATNTGAACATGATGGCCAATGC
rJMFF047F17+          AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
                      ____________________________________________________________
consensus             AGCTCTCATACAGTACACGCATCCCTTTGTCTCTGTTGATCTGAACATGATGGCCAATGC
 
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rJMSF039O09+          TTTCAAGACTAATGTAGCTGGGTTGGAAAAGGAACTTGAAGCCTTAATTACTGAGAATGA
rJMFF026O23+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMSF001A15+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMFF017J03+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMFF026H05+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMFF021I23+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMSF029I07+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMFF002I05+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMFF008C15+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
rJMFF047F17+          GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
                      ____________________________________________________________
consensus             GTTTAAGACCACTGTTACGGGGTTAGAGAAGGAACTTGAATCCTTAATTACAGACAACCA
 
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rJMSF039O09+          AATTCAGGCTAGAATAGATTCTCATAATAAGATTCTTTATGCAAGGCATGCTGATCAGAG
rJMFF026O23+          GATACAGGCTCGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMSF001A15+          GATACAGGCTCGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMFF017J03+          GATACAGGCTNGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMFF026H05+          GATACAGGCTNGAATCGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMFF021I23+          GATACAGGCTNGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMSF029I07+          GATACAGGCTCGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMFF002I05+          GATACAGGCTNGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMFF008C15+          GATACAGGCTNGAATCGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
rJMFF047F17+          GATACAGGCTCGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
                      ____________________________________________________________
consensus             GATACAGGCTCGAATTGATTCCCACAACAAGATCCTTTATGCACGGCATGCAGATCAGAG
 
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rJMSF039O09+          AAATGCAACCTTCCAGAGAGTCCTGCAGACCGGTAGGGAATTTGATCGAGATGTGAAAGC
rJMFF026O23+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMSF001A15+          AAACGCAACCTTCCAAAGGGTTCTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMFF017J03+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMFF026H05+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMFF021I23+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMSF029I07+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMFF002I05+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMFF008C15+          AAACGCAACCTTCCAAAGGGTTNTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
rJMFF047F17+          AAACGCAACCTTCCAAAGGGTTCTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
                      ____________________________________________________________
consensus             AAACGCAACCTTCCAAAGGGTTCTGCAGACCGGTGGTGAATTTGATCGAGATGTGAGAGC
 
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rJMSF039O09+          TATGCTTTTGAGA                                               
rJMFF026O23+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMSF001A15+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
JMFN035B06-                                                                    ACA
rJMFF017J03+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMFF026H05+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMFF021I23+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMSF029I07+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMFF002I05+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMFF008C15+          CATGCTTTTGAGAGCCAACCTTNTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
rJMFF047F17+          CATGCTTTTGAGAGCCAACCTTCTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
                      ____________________________________________________________
consensus             CATGCTTTTGAGAGCCAACCTTCTCAAGCACGAGTACAATGCCAGATCATCAAGGAAACA
 
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rJMFF026O23+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMSF001A15+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
JMFN035B06-           TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMFF017J03+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMFF026H05+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMFF021I23+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMSF029I07+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMFF002I05+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMFF008C15+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
rJMFF047F17+          TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
                      ____________________________________________________________
consensus             TGGAAACATATAATCAATCACTACAATTTGTCAAAAAAAAAATTAAAAAATCCAAGCTTG
 
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rJMFF026O23+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMSF001A15+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
JMFN035B06-           AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMFF017J03+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMFF026H05+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMFF021I23+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMSF029I07+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMFF002I05+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMFF008C15+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
rJMFF047F17+          AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
                      ____________________________________________________________
consensus             AGAATGCCAGAGTAGTGTAATACTGTAATTGACATATTTGCTTAGCTTAGCATAATGGTG
 
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rJMFF026O23+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMSF001A15+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
JMFN035B06-           GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMFF017J03+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMFF026H05+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMFF021I23+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMSF029I07+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMFF002I05+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMFF008C15+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
rJMFF047F17+          GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
                      ____________________________________________________________
consensus             GTCTTTAATCTTGAAGGATTTGCTTTCTGGGTGGGCACATAGTATCACTGTTCCTGTTCA
 
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rJMFF026O23+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCA             
rJMSF001A15+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCAT            
JMFN035B06-           TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTT   
rJMFF017J03+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
rJMFF026H05+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
rJMFF021I23+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
rJMSF029I07+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
rJMFF002I05+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
rJMFF008C15+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
rJMFF047F17+          TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
                      ____________________________________________________________
consensus             TATAACAAATCGCTGTGCCGGGGCTTGTGTGTAATCCTATGTAGTCATGTTCTGTTTATA
 
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rJMFF017J03+          CA                                                          
rJMFF026H05+          CACCATCT                                                    
rJMFF021I23+          CACC                                                        
rJMSF029I07+          CACCATCT                                                    
rJMFF002I05+          CACCATCT                                                    
rJMFF008C15+          CACCATCT                                                    
rJMFF047F17+          CACCATCTTGTGTTCTATTGGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAG
                      ____________________________________________________________
consensus             CACCATCTTGTGTTCTATTGGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAG