| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020N01 | Sequence | 734 | 009824 (5) | ref|XP_009614692.1| | 315 | PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis] | |||||
| JMFF034J22 | Sequence | 518 | 002356 (7) | ref|XP_009614692.1| | 154 | PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis] | 725 | 009824 (5) | ref|XP_009614692.1| | 311 | PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis] |
| JMFF047F06 | Sequence | 613 | 002356 (7) | ref|XP_009614692.1| | 198 | PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis] | 497 | 009824 (5) | ref|XP_004235367.1| | 196 | PREDICTED: uncharacterized protein LOC101248757 [Solanum lycopersicum] |
| JMSF036F08 | Sequence | 677 | 002356 (7) | ref|XP_009780705.1| | 221 | PREDICTED: uncharacterized protein LOC104229716 [Nicotiana sylvestris] ref|XP_00 | 798 | 009824 (5) | ref|XP_006363989.1| | 358 | PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum] |
| JMSF040B09 | Sequence | 671 | 002356 (7) | ref|XP_009614692.1| | 230 | PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis] | 815 | 009824 (5) | ref|XP_006363989.1| | 358 | PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF036F08+ GTCGGGTAGATATATGGCCTGGTAAA
rJMSF040B09+ GTCGGGTAGATATATGGCCTGGTAAA
____________________________________________________________
consensus GTCGGGTAGATATATGGCCTGGTAAA
. : . : . : . : . : . :
rJMSF036F08+ GATGAGCAACTTGTATGCCTTCATTCACCTGAAGCTTACGAGATGATTCAAAACCACCTA
rJMSF040B09+ GATGAGCAACTTGTATGCCTTCATTCACCTGAAGCTTACGAGATGATTCAAAACCACCTA
____________________________________________________________
consensus GATGAGCAACTTGTATGCCTTCATTCACCTGAAGCTTACGAGATGATTCAAAACCACCTA
. : . : . : . : . : . :
rJMFF034J22+ GAAATAGATTGGGTGATGGTGATATTCAAATAAGCAAGTTTAGAGTT
rJMFF020N01+ GAAATAGATTGGGTGATGGTGATATTCAAATAAGCAAGTTTAGAGTT
rJMSF036F08+ TCTCTCATTCTAGGAAATAGATTGGGTGATGGTGATATTCAAATAAGCAAGTTTAGAGTT
rJMSF040B09+ TCTCTCATTCTAGGAAATAGATTGGGTGATGGTGATATTCAAATAAGCAAGTTTAGAGTT
____________________________________________________________
consensus TCTCTCATTCTAGGAAATAGATTGGGTGATGGTGATATTCAAATAAGCAAGTTTAGAGTT
. : . : . : . : . : . :
rJMFF034J22+ GGCCAGGTTTATGCTGCATCTGTCATGTATGGCTACTTCCTTAAGCGGGTTGACCAGAGA
rJMFF020N01+ GGCCAGGTTTATGCTGCATCTGTCATGTATGGCTACTTCCTTAAGCGGGTTGACCAGAGA
rJMSF036F08+ GGCCAGGTTTATGCTGCATCTGTCATGTATGGCTACTTCCTTAAGCGGGTTGACCAGAGA
rJMSF040B09+ GGCCAGGTTTATGCTGCATCTGTCATGTATGGCTACTTCCTTAAGCGGGTTGACCAGAGA
____________________________________________________________
consensus GGCCAGGTTTATGCTGCATCTGTCATGTATGGCTACTTCCTTAAGCGGGTTGACCAGAGA
. : . : . : . : . : . :
rJMFF034J22+ TTCCAGCTAGAGAAGAACATTAAAGTTCTTCCTGAGGGAGTAGACAGAGAAGGTAGTGAC
rJMFF020N01+ TTCCAGCTAGAGAAGAACATTAAAGTTCTTCCTGAGGGAGTAGACAGAGAAGGTAGTGAC
rJMSF036F08+ TTCCAGCTAGAGAAGAACATTAAAGTTCTTCCTGAGGGAGTAGACAGAGAAGGTAGTGAC
rJMSF040B09+ TTCCAGCTAGAGAAGAACATTAAAGTTCTTCCTGAGGGAGTAGACAGAGAAGGTAGTGAC
____________________________________________________________
consensus TTCCAGCTAGAGAAGAACATTAAAGTTCTTCCTGAGGGAGTAGACAGAGAAGGTAGTGAC
. : . : . : . : . : . :
rJMFF034J22+ ATTCTGCAAGTTACAGGGGAAGAGTTGAGATCTGATGATAGCTATAATGCTCCTTTGAGC
rJMFF020N01+ ATTCTGCAAGTTACAGGGGAAGAGTTGAGATCTGATGATAGCTATAATGCTCATTTGAGC
rJMSF036F08+ ATTCTGCAAGTTACAGGGGAAGAGTTGAGATCTGATGATAGCTATAATGCTCCTTTGAGC
rJMSF040B09+ ATTCTGCAAGTTACAGGGGAAGAGTTGAGATCTGATGATAGCTATAATGCTCCTTTGAGC
____________________________________________________________
consensus ATTCTGCAAGTTACAGGGGAAGAGTTGAGATCTGATGATAGCTATAATGCTCCTTTGAGC
. : . : . : . : . : . :
rJMFF034J22+ TCCACACAATCCCATCCTGAAGTCGAATCATTTTCTGCTGGCGATATCAGTCCCGGGGGT
rJMFF020N01+ TCCACACAATCCCATCCTGAAGTCGAATCATTTTCTGCTGGCGATATCAGTCCCGGGGGT
rJMSF036F08+ TCCACACAATCCCATCCTGAAGTCGAATCATTTTCTGCTGGCGATATCAGTCCCGGGGGT
rJMSF040B09+ TCCACACAATCCCATCCTGAAGTCGAATCATTTTCTGCTGGCGATATCAGTCCCGGGGGT
rJMFF047F06+ ATATCAGTCCCGGGGGT
____________________________________________________________
consensus TCCACACAATCCCATCCTGAAGTCGAATCATTTTCTGCTGGCGATATCAGTCCCGGGGGT
. : . : . : . : . : . :
rJMFF034J22+ CTCGGCCATGGAATAAAGCCATCAAGATTGAGATCCTATGTGATGGCACTCGATGCGGAA
rJMFF020N01+ CTCGGCCATGGAATAAAGCCATCAAGATTGAGATCCTATGTGATGGCACTCGATGCGGAA
rJMSF036F08+ CTCGGCCATGGAATAAAGCCATCAAGATTGAGATCCTATGTGATGGCACTCGATGCGGAA
rJMSF040B09+ CTCGGCCATGGAATAAAGCCATCAAGATTGAGATCCTATGTGATGGCACTCGATGCGGAA
rJMFF047F06+ CTCGGCCATGGAATAAAGCCATCAAGATTGAGATCCTATGTGATGGCACTCGATGCGGAA
____________________________________________________________
consensus CTCGGCCATGGAATAAAGCCATCAAGATTGAGATCCTATGTGATGGCACTCGATGCGGAA
. : . : . : . : . : . :
rJMFF034J22+ ACTCTTCAGAGATACGCAAACATCAGATCCAAAGAAGCCATAGGAATGATTGAGAAACAT
rJMFF020N01+ ACTCTTCAGAGATACGCAAACATCAGATCCAAAGAAGCCATAGGAATGATTGAGAAACAT
rJMSF036F08+ ACTCTTCAGAGATACGCAAACATCAGATCCAAAGAAGCCATAGGAATGATTGAGAAACAT
rJMSF040B09+ ACTCTTCAGAGATACGCAAACATCAGATCCAAAGAAGCCATAGGAATGATTGAGAAACAT
rJMFF047F06+ ACTCTTCAGAGATACGCAAACATCAGATCCAAAGAAGCCATAGGAATGATTGAGAAACAT
____________________________________________________________
consensus ACTCTTCAGAGATACGCAAACATCAGATCCAAAGAAGCCATAGGAATGATTGAGAAACAT
. : . : . : . : . : . :
rJMFF034J22+ ACTGAAGCATTGTTTGGTAGACCTGAGATTGGTATCACACCTCAAGGAACCATAGATTCT
rJMFF020N01+ ACTGAAGCATTGTTTGGTAGACCTGAGATTGGTATCACACCTCAAGGAACCATAGATTCT
rJMSF036F08+ ACTGAAGCATTGTTTGGTAGACCTGAGATTGGTATCACACCTCAAGGAACCATAGATTCT
rJMSF040B09+ ACTGAAGCATTGTTTGGTAGACCTGAGATTGGTATCACACCTCAAGGAACCATAGATTCT
rJMFF047F06+ ACTGAAGCATTGTTTGGTAGACCTGAGATTGGTATCACACCTCAAGGAACCATAGATTCT
____________________________________________________________
consensus ACTGAAGCATTGTTTGGTAGACCTGAGATTGGTATCACACCTCAAGGAACCATAGATTCT
. : . : . : . : . : . :
rJMFF034J22+ TCCAAAGATGAAGTTATTAAAATTAGTTTCAGTGGTCTGAAAAGGCTTGTTATGGAGGCT
rJMFF020N01+ TCCAAAGATGAAGTTATTAAAATTAGTTTCAGTGGTCTGAAAAGGCTTGTTATGGAGGCT
rJMSF036F08+ TCCAAAGATGAAGTTATTAAAATTAGTTTCAGTGGTCTGAAAAGGCTTGTTATGGAGGCT
rJMSF040B09+ TCCAAAGATGAAGTTATTAAAATTAGTTTCAGTGGTCTGAAAAGGCTTGTTATGGAGGCT
rJMFF047F06+ TCCAAAGATGAAGTTATTAAAATTAGTTTCAGTGGTCTGAAAAGGCTTGTTATGGAGGCT
____________________________________________________________
consensus TCCAAAGATGAAGTTATTAAAATTAGTTTCAGTGGTCTGAAAAGGCTTGTTATGGAGGCT
. : . : . : . : . : . :
rJMFF034J22+ GTCACTTTAGGGTCCTTCCTTTGGGACGTCGAGAGCTATGTCGATTCAAGGTACCATTTT
rJMFF020N01+ GTCACTTTAGGGTCCTTCCTTTGGGACGTCGAGAGCTATGTCGATTCAAGGTACCATTTT
rJMSF036F08+ GTCACTTTAGGGTCCTTCCTTTGGGACGTCGAGAGCTATGTCGATTCAAGGTACCATTTT
rJMSF040B09+ GTCACTTTAGGGTCCTTCCTTTGGGACGTCGAGAGCTATGTCGATTCAAGGTACCATTTT
rJMFF047F06+ GTCACTTTAGGGTCCTTCCTTTGGGACGTCGAGAGCTATGTCGATTCAAGGTACCATTTT
____________________________________________________________
consensus GTCACTTTAGGGTCCTTCCTTTGGGACGTCGAGAGCTATGTCGATTCAAGGTACCATTTT
. : . : . : . : . : . :
rJMFF034J22+ GTT
rJMFF020N01+ GTT
rJMSF036F08+ GTTACCCAGTGATCATTTGTCACACTGCATCACACAATTGTATCTGCTGGAGGATTAGAT
rJMSF040B09+ GTTACCCAGTGATCATTTGTCACACTGCATCACACAATTGTATCTGCTGGAGGATTAGAT
rJMFF047F06+ GTTACCCAGTGATCATTTGTCACACTGCATCACACAATTGTATCTGCTGGAGGATTAGAT
____________________________________________________________
consensus GTTACCCAGTGATCATTTGTCACACTGCATCACACAATTGTATCTGCTGGAGGATTAGAT
. : . : . : . : . : . :
rJMSF036F08+ GAGTGAATGCAGTACCATTCTAGGGGTAAATGCAATTATTCTTGTGTCGATT
rJMSF040B09+ GAGTGAATGCAGTACCATTCTAGGGGTAAATGCAATTATTCTTGTGTCGATTATTTGTAC
rJMFF047F06+ GAGTGAATGCAGTCCCATTCTAGGGGTAAATGCAATTATTCTTGTGTCGATTATTTGTAC
____________________________________________________________
consensus GAGTGAATGCAGTACCATTCTAGGGGTAAATGCAATTATTCTTGTGTCGATTATTTGTAC
. : . : . : . : . : . :
rJMFF047F06+ ATAATTACAGTATTTTGATGATTTAATGATATACTGCTTGCTAAACTTTACCAAAAGTCC
____________________________________________________________
consensus ATAATTACAGTATTTTGATGATTTAATGATATACTGCTTGCTAAACTTTACCAAAAGTCC