| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026N04 | Sequence | 480 | 006014 (16) | emb|CDY67992.1| | 2e-22 | BnaCnng57230D [Brassica napus] | 738 | 009820 (9) | ref|XP_009629176.1| | 4e-43 | PREDICTED: UPF0202 protein At1g10490-like [Nicotiana tomentosiformis] |
| JMFF032J19 | Sequence | 237 | 006014 (16) | 650 | 009820 (9) | ref|XP_009629176.1| | 1e-26 | PREDICTED: UPF0202 protein At1g10490-like [Nicotiana tomentosiformis] | |||
| JMFF046P22 | Sequence | 437 | 006014 (16) | ref|XP_006366781.1| | 4e-13 | PREDICTED: ER membrane protein complex subunit 1-like [Solanum tuberosum] | 458 | 009820 (9) | |||
| JMSF010M14 | Sequence | 304 | 010607 (3) | gb|KJB49108.1| | 6e-22 | hypothetical protein B456_008G101500 [Gossypium raimondii] | 760 | 009820 (9) | ref|XP_009629176.1| | 5e-43 | PREDICTED: UPF0202 protein At1g10490-like [Nicotiana tomentosiformis] |
| JMSF019M11 | Sequence | 485 | 010724 (4) | ref|XP_009803442.1| | 9e-39 | PREDICTED: UPF0202 protein At1g10490-like [Nicotiana sylvestris] | 742 | 009820 (9) | emb|CDP12880.1| | 3e-51 | unnamed protein product [Coffea canephora] |
| JMSF025J20 | Sequence | 139 | 010724 (4) | 783 | 009820 (9) | ref|XP_002279361.1| | 7e-96 | PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera] emb|CBI21526.3| unnamed pr | |||
| JMSF037F15 | Sequence | 662 | 010607 (3) | gb|KDO50463.1| | 3e-73 | hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1| | 738 | 009820 (9) | emb|CDP12880.1| | 4e-52 | unnamed protein product [Coffea canephora] |
| JMSF039J09 | Sequence | 671 | 010724 (4) | gb|KDO50463.1| | 3e-74 | hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1| | 870 | 009820 (9) | emb|CDP12880.1| | 9e-67 | unnamed protein product [Coffea canephora] |
| JMSF047H05 | Sequence | 706 | 010724 (4) | gb|KDO50463.1| | 9e-75 | hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1| | 774 | 009820 (9) | emb|CDP12880.1| | 2e-44 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF025J20+ TGGAGTAAACATAAATTGGC
____________________________________________________________
consensus TGGAGTAAACATAAATTGGC
. : . : . : . : . : . :
rJMSF025J20+ CCATTCTTCATTGGCCATAGCCCAAATAGTGTGACTGGGGAGCACACATGCATGGTCTTG
____________________________________________________________
consensus CCATTCTTCATTGGCCATAGCCCAAATAGTGTGACTGGGGAGCACACATGCATGGTCTTG
. : . : . : . : . : . :
rJMSF025J20+ AAGCCCTTGAACAGTGATGATATTGAAGTTAATGGATCCAATGAGTGGGGGTTTTTTGGT
____________________________________________________________
consensus AAGCCCTTGAACAGTGATGATATTGAAGTTAATGGATCCAATGAGTGGGGGTTTTTTGGT
. : . : . : . : . : . :
rJMSF025J20+ CCTTTTTACCAAGATTTTCGGAAGAGATTTGCAAGGCTACTGGATAAAAGCTTCCGTTCT
____________________________________________________________
consensus CCTTTTTACCAAGATTTTCGGAAGAGATTTGCAAGGCTACTGGATAAAAGCTTCCGTTCT
. : . : . : . : . : . :
rJMSF025J20+ ATGGAGTACAAGCTTGCTATGAGTGTATTGGATCCGAAGATCGATTTCGCAGAGGTTGAC
____________________________________________________________
consensus ATGGAGTACAAGCTTGCTATGAGTGTATTGGATCCGAAGATCGATTTCGCAGAGGTTGAC
. : . : . : . : . : . :
rJMSF025J20+ TCATCGGATGGATTTTTGGAATCCATTGATGGAATATTTTCTCCACATGATATGAAGAGG
____________________________________________________________
consensus TCATCGGATGGATTTTTGGAATCCATTGATGGAATATTTTCTCCACATGATATGAAGAGG
. : . : . : . : . : . :
rJMSF025J20+ CTTGAAGCCTACACAAACAATCTTGTGGATTTTCAGTCGATTATGGATTGTGTCTCAATA
rJMSF039J09+ ATGGATTGTGTCTCAATA
____________________________________________________________
consensus CTTGAAGCCTACACAAACAATCTTGTGGATTTTCAGTCGATTATGGATTGTGTCTCAATA
. : . : . : . : . : . :
rJMSF025J20+ CTTGCACACTTGTATTTCTCAGAGAAGCTCCCAGTTTCACTTTCATATACTCAGGCTTCT
rJMSF039J09+ CTTGCACACTTGTATTTCTCAGAGAAGCTCCCAGTTTCACTTTCATATACTCAGGCTTCT
____________________________________________________________
consensus CTTGCACACTTGTATTTCTCAGAGAAGCTCCCAGTTTCACTTTCATATACTCAGGCTTCT
. : . : . : . : . : . :
rJMSF025J20+ GTTCTGCTTTGCATTGGTTTGCAGGATAAAGATATTTCTCAGATTGAGGGAGAAACGCGT
rJMSF019M11+ TTGGTTTGCAGGATAAAGATATTTCTCAGATTGAGGGAGAAACGCGT
rJMSF037F15+ TTGGTTTGCAGGATAAAGATATTTCTCAGATTGAGGGAGAAACGCGT
rJMSF039J09+ GTTCTGCTTTGCATTGGTTTGCAGGATAAAGATATTTCTCAGATTGAGGGAGAAACGCGT
rJMSF047H05+ CGT
____________________________________________________________
consensus GTTCTGCTTTGCATTGGTTTGCAGGATAAAGATATTTCTCAGATTGAGGGAGAAACGCGT
. : . : . : . : . : . :
rJMSF025J20+ CTGGAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
rJMSF019M11+ CTGGAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
rJMSF037F15+ CTGGAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
rJMSF039J09+ CTGGAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
rJMFF026N04+ GAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
rJMSF010M14+ GAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
rJMSF047H05+ CTGGAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
____________________________________________________________
consensus CTGGAAAGACAGCAGATTTTGTCTTTATTTATAAAGACAATGAAGAAGTTCTACAAGTAC
. : . : . : . : . : . :
rJMSF025J20+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAA
rJMSF019M11+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
rJMSF037F15+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
rJMSF039J09+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
rJMFF026N04+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
rJMFF032J19+ CTAGAAGAAATAAAG
rJMSF010M14+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
rJMSF047H05+ TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
____________________________________________________________
consensus TTGTATGGCCTTGCCTCCAAAGAGATTGATTCAATTGTATCTCGACTAGAAGAAATAAAG
. : . : . : . : . : . :
rJMSF019M11+ ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
rJMSF037F15+ ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
rJMSF039J09+ ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
rJMFF026N04+ ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
rJMFF032J19+ ATGGAGCNTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
rJMSF010M14+ ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
rJMSF047H05+ ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
____________________________________________________________
consensus ATGGAGCCTCTTGCTATATCATTGGACGATGATCTTAACAATGCGGCAAAACAAGTCCAG
. : . : . : . : . : . :
rJMSF019M11+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
rJMSF037F15+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
rJMSF039J09+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
rJMFF026N04+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
rJMFF032J19+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
rJMSF010M14+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
rJMSF047H05+ GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
____________________________________________________________
consensus GAGGAGATGAATGCCAAAATGGATGGTCTATTAGACCCAGATCTACTTCAAGGATATGCC
. : . : . : . : . : . :
rJMSF019M11+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
rJMSF037F15+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
rJMSF039J09+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
rJMFF026N04+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
rJMFF032J19+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
rJMSF010M14+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
rJMSF047H05+ ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
____________________________________________________________
consensus ATCGTGGATAGAGAAGCTGATTTTGAGAATGCCCTGCAAAATGGAGGAGGAAAGGTACTT
. : . : . : . : . : . :
rJMSF019M11+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMSF037F15+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMSF039J09+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMFF026N04+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMFF032J19+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMSF010M14+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMSF047H05+ CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
rJMFF046P22+ GAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
____________________________________________________________
consensus CCCGGTGGAGTAATCAGCGTGAAATCCAACAACAGAATCAAGGTTGATAAAGGCCAGAAG
. : . : . : . : . : . :
rJMSF019M11+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMSF037F15+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMSF039J09+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMFF026N04+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMFF032J19+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMSF010M14+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMSF047H05+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
rJMFF046P22+ GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
____________________________________________________________
consensus GGTGAGAAGAAGAGAAGCAAGAATTACCTATCCAAATCAAGCAAGAAAAGGAAGTCTTGA
. : . : . : . : . : . :
rJMSF019M11+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMSF037F15+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMSF039J09+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMFF026N04+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMFF032J19+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMSF010M14+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMSF047H05+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
rJMFF046P22+ CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
____________________________________________________________
consensus CCTGTTGAAGGTACGGCCTTGTCATATTTTCTAATGTATAGATCGAGCTTTTGTTCTCTT
. : . : . : . : . : . :
rJMSF019M11+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMSF037F15+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMSF039J09+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMFF026N04+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMFF032J19+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMSF010M14+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMSF047H05+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
rJMFF046P22+ GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
____________________________________________________________
consensus GATTGTGAGCGGTCAGCTAGTTGAACAATTTCAATATATATATTTGATGGAAATGTGACA
. : . : . : . : . : . :
rJMSF019M11+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMSF037F15+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMSF039J09+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMFF026N04+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMFF032J19+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMSF010M14+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMSF047H05+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
rJMFF046P22+ ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
____________________________________________________________
consensus ACAACCCAACCAACCTTATCATGAGTTGGGTAATCAATTTTGAGTATTGTGACAAAGCAT
. : . : . : . : . : . :
rJMSF019M11+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGAC
rJMSF037F15+ TTTGAAGCATAAACCCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
rJMSF039J09+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
rJMFF026N04+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
rJMFF032J19+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
rJMSF010M14+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
rJMSF047H05+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
rJMFF046P22+ TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
____________________________________________________________
consensus TTTGAAGCATAAA-CCTTGTGCCCTTAGTAGATTATTCCCATTAGGGTTTAGATTAGGA-
. : . : . : . : . : . :
rJMSF019M11+ CAAGGTTTTACATAATGATTATCATGTTGTAACT
rJMSF037F15+ CAAGGTTTTACATAATGATTATCATGT
rJMSF039J09+ CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
rJMFF026N04+ CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
rJMFF032J19+ CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
rJMSF010M14+ CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
rJMSF047H05+ CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
rJMFF046P22+ CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
____________________________________________________________
consensus CAAGGTTTTACATAATGATTATCATGTTGTAACTTGTAAGGTTAAAATGTTAGATGCTTT
. : . : . : . : . : . :
rJMSF039J09+ CTCCTTCTGATGTT
rJMFF026N04+ CTCCTTCTGATGTTTGCTTCTCG
rJMFF032J19+ CTCCTTCTGATGTTTGCTTCTCGTGGATAATCTTTAT
rJMSF010M14+ CTCCTTCTGATGTTTACTTCTCGTGGATAATCTTTAT
rJMSF047H05+ CTCCTTCTGATGTTTACTTCTCGTGGATAATCTTTAT
rJMFF046P22+ CTCCTTCTGATGTTTGCTTCTCGTGGATAATCTTTATTAGAAACGTTGAGTTTGGTTCGG
____________________________________________________________
consensus CTCCTTCTGATGTTTGCTTCTCGTGGATAATCTTTATTAGAAACGTTGAGTTTGGTTCGG