Contig 009819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P22Sequence583004484 (2)ref|XP_010257131.1|7e-71PREDICTED: cullin-3A-like [Nelumbo nucifera]767009819 (3)ref|XP_010257125.1|2e-116PREDICTED: cullin-3A-like isoform X2 [Nelumbo nucifera]
JMFF046O22Sequence596020645ref|XP_009785296.1|1e-117PREDICTED: cullin-3A-like isoform X2 [Nicotiana sylvestris]490009819 (3)ref|XP_010257125.1|2e-53PREDICTED: cullin-3A-like isoform X2 [Nelumbo nucifera]
JMFS112G06Sequence394009819 (3)ref|XP_010257125.1|4e-31PREDICTED: cullin-3A-like isoform X2 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009P22+ ATGGCA
                      ____________________________________________________________
consensus ATGGCA
 
. : . : . : . : . : . :
rJMFF009P22+ GACAAATATGGGCACAGCTGACTTGAAAGCAACATTTGGGAAAGGGCAGAAGCATGAGCT
                      ____________________________________________________________
consensus GACAAATATGGGCACAGCTGACTTGAAAGCAACATTTGGGAAAGGGCAGAAGCATGAGCT
 
. : . : . : . : . : . :
rJMFF009P22+ TAATGTGTCCACATATCAGATGTGCATCCTTATGCTCTTCAATAATGCTGATAGGTTGAG
                      ____________________________________________________________
consensus TAATGTGTCCACATATCAGATGTGCATCCTTATGCTCTTCAATAATGCTGATAGGTTGAG
 
. : . : . : . : . : . :
rJMFF009P22+ TTATAAAGACATAGAACAAGCTACAGAGATTCATGTCTCAGATTTAAAGAGGTGTTTGCA
                      ____________________________________________________________
consensus TTATAAAGACATAGAACAAGCTACAGAGATTCATGTCTCAGATTTAAAGAGGTGTTTGCA
 
. : . : . : . : . : . :
rJMFF009P22+ ATCTCTAGCTTGTGTCAAGGGGAAGAATGTTTTGCGGAAGGAGCCCATGAGCAAGGATAT
                      ____________________________________________________________
consensus ATCTCTAGCTTGTGTCAAGGGGAAGAATGTTTTGCGGAAGGAGCCCATGAGCAAGGATAT
 
. : . : . : . : . : . :
rJMFF009P22+ TGCTGAAGATGATTCCTTTTTCTTTAATGAAAAATTCACTAGCAAATTCTTCAAGGTTAA
rJMFF046O22+ TCAAGGTTAA
                      ____________________________________________________________
consensus TGCTGAAGATGATTCCTTTTTCTTTAATGAAAAATTCACTAGCAAATTCTTCAAGGTTAA
 
. : . : . : . : . : . :
rJMFF009P22+ AATAGGCACCGTTGTTGCACAGAAGGAATCTGAACCAGAGAAACAAGAGACCCGACAAAG
rJMFF046O22+ AATAGGCACCGTTGTTGCACAGAAGGAATCTGAACCAGAGAAACAAGAGACCCGACAAAG
                      ____________________________________________________________
consensus AATAGGCACCGTTGTTGCACAGAAGGAATCTGAACCAGAGAAACAAGAGACCCGACAAAG
 
. : . : . : . : . : . :
rJMFF009P22+ AGTTGAGGAGGACAGGAAACCTCAGATAGAGGCAGCAATAGTGAGAATTATGAAGTCACG
JMFS112G06+ AGGCAGCAATAGTGAGAATCATGAAGTCGCG
rJMFF046O22+ AGTTGAGGAGGACAGGAAACCTCAGATAGAGGCAGCAATAGTGAGAATTATGAGGTCACG
                      ____________________________________________________________
consensus AGTTGAGGAGGACAGGAAACCTCAGATAGAGGCAGCAATAGTGAGAATTATGAAGTCACG
 
. : . : . : . : . : . :
rJMFF009P22+ AAGGGTGCTTGATCATAATAACATTGTTGCAGAAGTCACGAAGCAGCTGCAGTCCCGGTT
JMFS112G06+ GAGGGTGCTTGATCATAACAATATCGTAACTGAAGTGACAAAGCAGCTACAATCTCGCTT
rJMFF046O22+ AAGGGTGCTTGATCATAATAACATTGTTGCAGAAGTCACGAAGCAGCTGCAGTCCCGGTT
                      ____________________________________________________________
consensus AAGGGTGCTTGATCATAATAACATTGTTGCAGAAGTCACGAAGCAGCTGCAGTCCCGGTT
 
. : . : . : . : . : . :
rJMFF009P22+ CCTGCCAAATCCAGTCGTTATAAAGAAACGTATCGAGTCTTTGATTGAGCGGGAATTTTT
JMFS112G06+ CTTGCCAAATCCTGTTGTTATAAAGAAACGAATTGAGTCTCTGATAGAACGGGAATTCTT
rJMFF046O22+ CCTGCCAAATCCAGTCGTTATAAAGAAACGTATCGAGTCTTTGATTGAGCGGGAATTTTT
                      ____________________________________________________________
consensus CCTGCCAAATCCAGTCGTTATAAAGAAACGTATCGAGTCTTTGATTGAGCGGGAATTTTT
 
. : . : . : . : . : . :
rJMFF009P22+ GGAAAGAGATAAAACAGATAGGAAGTTGTATCATTACCTGGCTTGAAAAGCAAAATATAC
JMFS112G06+ GGAAAGAGATAAAACAGATAGGAAGCCGTATCGATACCTGGCTTGA
rJMFF046O22+ GGAAAGAGATAAAACAGATAGGAAGTTGTATCATTACCTGGCTTGAAAAGCAAAATATAC
                      ____________________________________________________________
consensus GGAAAGAGATAAAACAGATAGGAAGTTGTATCATTACCTGGCTTGAAAAGCAAAATATAC
 
. : . : . : . : . : . :
rJMFF009P22+ AAGAAATTCTTACTCTGTGCAACCGCGTAATTTCAGCGGCGAACTGATCAAATGTAAGTT
rJMFF046O22+ AAGAAATTCTTACTCTGTGCAACCGCGTAATTTCAGCGGCGAACTGATCAAATGTAAGTT
                      ____________________________________________________________
consensus AAGAAATTCTTACTCTGTGCAACCGCGTAATTTCAGCGGCGAACTGATCAAATGTAAGTT
 
. : . : . : . : . : . :
rJMFF009P22+ GGAATGTATTTTCATTAATCACTGCTAGCTCAGATGGGCTTTTAGTGACATGTTTGTTTG
rJMFF046O22+ GGAATGTATTTTCATTAATCACTGCTAGCTCAGATGGGCTTTTAGTGACATGTTTGTTTG
                      ____________________________________________________________
consensus GGAATGTATTTTCATTAATCACTGCTAGCTCAGATGGGCTTTTAGTGACATGTTTGTTTG
 
. : . : . : . : . : . :
rJMFF009P22+ TTCAATGCATAAAACTAAGACAATTCCTGAAATATCAGTTA
rJMFF046O22+ TTCAATGCATAAAACTAAGACAATTCCTGAAATATCAGTTATGAAAATAGTTTCTGAACC
                      ____________________________________________________________
consensus TTCAATGCATAAAACTAAGACAATTCCTGAAATATCAGTTATGAAAATAGTTTCTGAACC