Contig 009818:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P18Sequence139010244 (3)653009818 (3)ref|XP_009594285.1|2e-79PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Nicotiana to
JMFF028L19Sequence280010244 (3)636009818 (3)ref|XP_009594285.1|1e-78PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Nicotiana to
JMFF046O11Sequence592010244 (3)gb|KDP33521.1|2e-50hypothetical protein JCGZ_07092 [Jatropha curcas]637009818 (3)ref|XP_004245209.1|4e-56PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Solanum lyco

Alignment

This contig is upended


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rJMFF028L19+                                                               CAATCCC
rJMFF012P18+                                                            CTACAATCCC
                      ____________________________________________________________
consensus                                                               CTACAATCCC
 
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rJMFF028L19+          AGCCGTAATGAGATCTCCATGGTTCAGAAAGAACCTAACAGTGCCAAAATCCTTTCTGGC
rJMFF012P18+          AGCCGTAATGAGATCTCCATGGTTCAGAAAGAACCTAACAGTGCCAAAATCCTTTCTGGC
                      ____________________________________________________________
consensus             AGCCGTAATGAGATCTCCATGGTTCAGAAAGAACCTAACAGTGCCAAAATCCTTTCTGGC
 
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rJMFF028L19+          ATCGTCGGAAAAAGTGGAAGAGGAAGAAGAAGAAGAAGAAGAATCCCGGCGAGAATTTGA
rJMFF012P18+          ATCGTCGGAAAAAGTGGAAGAGGAAGAAGAAGAAGAAGAAGAATCCCGGCGAGAATTTGA
rJMFF046O11+                                GAAGAAGAAGAAGAAGAAGAATCCCGGCGAGAATNTGA
                      ____________________________________________________________
consensus             ATCGTCGGAAAAAGTGGAAGAGGAAGAAGAAGAAGAAGAAGAATCCCGGCGAGAATTTGA
 
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rJMFF028L19+          TCCACCGGCACTCCGGAAGTCTCCGTCGTCGCCGGCGTTCTTCAACGCCTTCGAGTTGAT
rJMFF012P18+          TCCACCGGCACTCCGGAAGTCTCCGTCGTCGCCGGCGTTCTTCAACGCCTTCGAGTTGAT
rJMFF046O11+          TCCACCGGCACTCCGGAAGTCTCNGTCGTCGCCGGCGTTCTTCAACGCCTTCGAGTTGAT
                      ____________________________________________________________
consensus             TCCACCGGCACTCCGGAAGTCTCCGTCGTCGCCGGCGTTCTTCAACGCCTTCGAGTTGAT
 
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rJMFF028L19+          CTCGTCGATGTCGTCGGGGTTCGATCTTTCCGGGCTGTTTGAGATAAAGGGGAAAGCGTC
rJMFF012P18+          CTCGTCGATGTCGTCGGGGTTCGATCTTTCCGGGCTGTTTGAGATAAAGGGGAAAGCGTC
rJMFF046O11+          CTCGTCGANGTCGTCGGGGTTCGATCTTTCCGGGCTGTNTGAGATAAAGGGGAAAGCGTC
                      ____________________________________________________________
consensus             CTCGTCGATGTCGTCGGGGTTCGATCTTTCCGGGCTGTTTGAGATAAAGGGGAAAGCGTC
 
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rJMFF028L19+          ATCCATGTTTACGTCGAGGAGTTCGGCCAGAGATGTGGTTGGGAAAATTGAGAAAATGGC
rJMFF012P18+          ATCCATGTTTACGTCGAGGAGTTCGGCCAGAGATGTGGTTGGGAAAATTGAGAAAATGGC
rJMFF046O11+          ATCCATGTNTACGTCGAGGAGTTCGGCCAGAGATGTGGTTGGGAAAATTGAGAAAATGGC
                      ____________________________________________________________
consensus             ATCCATGTTTACGTCGAGGAGTTCGGCCAGAGATGTGGTTGGGAAAATTGAGAAAATGGC
 
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rJMFF028L19+          TAAGGGATTAAGGTTTAAGATCTTGAGGGTAAAGCCGTTCAAGGTTAAGATGCAAGGCCC
rJMFF012P18+          TAAGGGATTAAGGTTTAAGATCTTGAGGGTAAAGCCGTTCAAGGTTAAGATGCAAGGCCC
rJMFF046O11+          TAAGGGATTAAGGTTTAAGATCTTGAGGGTAAAGCCGTTCAAGGTTAAGATGCAAGGCCC
                      ____________________________________________________________
consensus             TAAGGGATTAAGGTTTAAGATCTTGAGGGTAAAGCCGTTCAAGGTTAAGATGCAAGGCCC
 
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rJMFF028L19+          CGACGGCGGCCGGAAAGGGCCACTTATGGTGACCGCCGAGGTGTTCAAGGTGGCGCCGGA
rJMFF012P18+          CGACGGCGGCCGGAAAGGGCCACTTATGGTGACCGCCGAGGTGTTCAAGGTGGCGCCGGA
rJMFF046O11+          CGACGGCGGCCGGAAAGGGCCACTTATGGTGACCGCCGAGGTGTTCAAGGTGGCGCCGGA
                      ____________________________________________________________
consensus             CGACGGCGGCCGGAAAGGGCCACTTATGGTGACCGCCGAGGTGTTCAAGGTGGCGCCGGA
 
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rJMFF028L19+          GGTAACGGTGGTGGAGTTCTCCAAGTCGTCCGGCGACACGTTGGAGTACAATAGGTTTTG
rJMFF012P18+          GGTAACGGTGGTGGAGTTCTCCAAGTCGTCCGGCGACACGTTGGAGTACAATAGGTTTTG
rJMFF046O11+          GGTAACGGTGGTGGAGTTCTCCAAGTCGTCCGGCGACACGTTGGAGTACAATAGGTTTTG
                      ____________________________________________________________
consensus             GGTAACGGTGGTGGAGTTCTCCAAGTCGTCCGGCGACACGTTGGAGTACAATAGGTTTTG
 
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rJMFF028L19+          TGAGGAGGAAGCTAGGCCGGCATTGAAAGACATTGTTTGGGCATGGCAAGGTGGCACTAG
rJMFF012P18+          TGAGGAGGAAGCTAGGCCGGCATTGAAAGACATTGTTTGGGCATGGCAAGGTGGCACTAG
rJMFF046O11+          TGAGGAGGAAGCTAGGCCGGCATTGAAAGACATTGTTTGGGCATGGCAAGGTGGCACTAG
                      ____________________________________________________________
consensus             TGAGGAGGAAGCTAGGCCGGCATTGAAAGACATTGTTTGGGCATGGCAAGGTGGCACTAG
 
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rJMFF028L19+          CAGCATCAATGCTAATGGTGAATGCACAAAATAACTTATTTCTTTCCTC-TTAATCATTC
rJMFF012P18+          CAGCATCAATGCTAATGGTGAATGCACAAAATAACTTATTTCTTTCCTCACTAATCATTC
rJMFF046O11+          CAGCATCAATGCTAATGGTGAATGCACAAAATAACTTATTTCTTTCCTC-TTAATCATTC
                      ____________________________________________________________
consensus             CAGCATCAATGCTAATGGTGAATGCACAAAATAACTTATTTCTTTCCTC-TTAATCATTC
 
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rJMFF028L19+          CACTTCTTTAAAGTTTTTATCAAAAAAAAT                              
rJMFF012P18+          CACTTCTTTAAAGTTTNTATCAAAAAAAATATATATAGTTTTG                 
rJMFF046O11+          CACTTCTTTAAAGTTTTTATCAAAAAAAATATATATAGTTTTGCTGTTTCAATGATGGAA
                      ____________________________________________________________
consensus             CACTTCTTTAAAGTTTTTATCAAAAAAAATATATATAGTTTTGCTGTTTCAATGATGGAA
 
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rJMFF046O11+          TTGACTTTTTTTAAGCACATAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTGACTTTTTTTAAGCACATAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG