| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009P01 | Sequence | 583 | 000127 (5) | ref|XP_011069980.1| | 156 | PREDICTED: uncharacterized protein LOC105155744 [Sesamum indicum] | 711 | 009817 (5) | ref|XP_009788748.1| | 3e-47 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF020G17 | Sequence | 551 | 000127 (5) | ref|XP_011010093.1| | 142 | PREDICTED: uncharacterized protein LOC105115030 [Populus euphratica] ref|XP_0110 | 750 | 009817 (5) | ref|XP_009788748.1| | 3e-49 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF023I02 | Sequence | 432 | 000127 (5) | ref|XP_011010093.1| | 87.0 | PREDICTED: uncharacterized protein LOC105115030 [Populus euphratica] ref|XP_0110 | 714 | 009817 (5) | ref|XP_009788748.1| | 1e-47 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF043H20 | Sequence | 605 | 000127 (5) | ref|XP_002322574.2| | 4e-40 | hypothetical protein POPTR_0016s02400g [Populus trichocarpa] gb|EEF04335.2| hypo | 617 | 009817 (5) | ref|XP_009788748.1| | 1e-38 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF046L23 | Sequence | 536 | 000127 (5) | ref|XP_011010093.1| | 132 | PREDICTED: uncharacterized protein LOC105115030 [Populus euphratica] ref|XP_0110 | 109 | 009817 (5) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF020G17+ CGCCATCAANCAAAAAGCACAAATAGTGGACTGATTCTTCAAAAACAAGCT
rJMFF023I02+ TTCAAAAACAAGCT
rJMFF009P01+ CAAGCT
____________________________________________________________
consensus CGCCATCAANCAAAAAGCACAAATAGTGGACTGATTCTTCAAAAACAAGCT
. : . : . : . : . : . :
rJMFF020G17+ GGAGAAGTTGTGCTGTTTGGTAGAAAGCTTTTACAGGAAAGTGGTGGTTTTCTGCTGAAT
rJMFF023I02+ GGAGAAGTTGTGCTGTTTGGTAGAAAGCTTTTACAGGAAAGTGGTGGTTTTCTGCTGAAT
rJMFF009P01+ GGAGAAGTTGTGCTGTTTGGTAGAAAGCTTTTACAGGAAAGTGGTGGTTTTCTGCTGAAT
____________________________________________________________
consensus GGAGAAGTTGTGCTGTTTGGTAGAAAGCTTTTACAGGAAAGTGGTGGTTTTCTGCTGAAT
. : . : . : . : . : . :
rJMFF020G17+ AGCCAATCCAACCAGACCATTGGGATTGCAGCACTTTTTGGCTGGGGAATGGCAATTATT
rJMFF023I02+ AGCCAATCCAACCAGACCATTGGGATTGCAGCACTTTTTGGCTGGGGAATGGCAATTATT
rJMFF009P01+ AGCCAATCCAACCAGACCATTGGGATTGCAGCACTTTTTGGCTGGGGAATGGCAATTATT
rJMFF043H20+ GGGGAATGGCAATTATT
____________________________________________________________
consensus AGCCAATCCAACCAGACCATTGGGATTGCAGCACTTTTTGGCTGGGGAATGGCAATTATT
. : . : . : . : . : . :
rJMFF020G17+ TACATTGGTGGACGCCTGCCGCAAATTCGCTTAAATTTCAGGAGGGGAAATGTTGAAGGG
rJMFF023I02+ TACATTGGTGGACGCCTGCCGCAAATTCGCTTAAATTTCAGGAGGGGAAATGTTGAAGGG
rJMFF009P01+ TACATTGGTGGACGCCTGCCGCAAATTCGCTTAAATTTCAGGAGGGGAAATGTTGAAGGG
rJMFF043H20+ TACATTGGTGGACGCCTGCCGCAAATTCGCTTAAATTTCAGGAGGGGAAATGTTGAAGGG
____________________________________________________________
consensus TACATTGGTGGACGCCTGCCGCAAATTCGCTTAAATTTCAGGAGGGGAAATGTTGAAGGG
. : . : . : . : . : . :
rJMFF020G17+ CTAAATCCACTAATGTTCATGTTTGCTCTGTTTGGTAATGTCACATATGTAGCAAGCATT
rJMFF023I02+ CTAAATCCACTAATGTTCATGTTTGCTCTGTTTGGTAATGTCACATATGTAGCAAGCATT
rJMFF009P01+ CTAAATCCACTAATGTTCATGTTTGCTCTGTTTGGTAATGTCACATATGTAGCAAGCATT
rJMFF043H20+ CTAAATCCACTAATGTTCATGTTTGCTCTGTTTGGTAATGTCACATATGTAGCAAGCATT
____________________________________________________________
consensus CTAAATCCACTAATGTTCATGTTTGCTCTGTTTGGTAATGTCACATATGTAGCAAGCATT
. : . : . : . : . : . :
rJMFF020G17+ CTTGTCAGCAGCCTGGACTGGTCAAAACTTGGACCAAACATGCCCTGGCTGGTTGATGCA
rJMFF023I02+ CTTGTCAGCAGCCTGGACTGGTCAAAACTTGGACCAAACATGCCCTGGCTGGTTGATGCA
rJMFF009P01+ CTTGTCAGCAGCCTGGACTGGTCAAAACTTGGACCAAACATGCCCTGGCTGGTTGATGCA
rJMFF043H20+ CTTGTCAGCAGCCTGGACTGGTCAAAACTTGGACCAAACATGCCCTGGCTGGTTGATGCA
____________________________________________________________
consensus CTTGTCAGCAGCCTGGACTGGTCAAAACTTGGACCAAACATGCCCTGGCTGGTTGATGCA
. : . : . : . : . : . :
rJMFF020G17+ AGTGGATGTGTACTCCTTGATACCTTAATACTAATTCAGTTCTTCTATTACCGTAATCGT
rJMFF023I02+ AGTGGATGTGTACTCCTTGATACCTTAATACTAATTCAGTTCTTCTATTACCGTAATCGT
rJMFF009P01+ AGTGGATGTGTACTCCTTGATACCTTAATACTAATTCAGTTCTTCTATTACCGTAATCGT
rJMFF043H20+ AGTGGATGTGTACTCCTTGATACCTTAATACTAATTCAGTTCTTCTATTACCGTAATCGT
____________________________________________________________
consensus AGTGGATGTGTACTCCTTGATACCTTAATACTAATTCAGTTCTTCTATTACCGTAATCGT
. : . : . : . : . : . :
rJMFF020G17+ GTATCGGATAAAGTAGCGAGTAAGCATGAAAATGGCAGCCCTTAGAATTGTCCCCAAGAA
rJMFF023I02+ GTATCGGATAAAGTAGCGAGTAAGCATGAAAATGGCAGCCCTTAGAATTGTCCCCAAGAA
rJMFF009P01+ GTATCGGATAAAGTAGCGAGTAAGCATGAAAATGGCAGCCCTTAGAATTGTCCCCAAGAA
rJMFF043H20+ GTATCGGATAAAGTAGCGAGTAAGCATGAAAATGGCAGCCCTTAGAATTGTCCCCAAGAA
____________________________________________________________
consensus GTATCGGATAAAGTAGCGAGTAAGCATGAAAATGGCAGCCCTTAGAATTGTCCCCAAGAA
. : . : . : . : . : . :
rJMFF020G17+ GAACATATTTTGCAGGTCAAGTGAACCAACCAATATTTGGATCATACTACATCTGACTGC
rJMFF023I02+ GAACATATTTTGCAGGTCAAGTGAACCAACCAATATTTGGATCATACTACATCTGACTGC
rJMFF009P01+ GAACATATTTTGCAGGTCAAGTGAACCAACCAATATTTGGATCATACTACATCTGACTGC
rJMFF043H20+ GAACATATTTTGCAGGTCAAGTGAACCAACCAATATTTGGATCATACTACATCTGACTGC
____________________________________________________________
consensus GAACATATTTTGCAGGTCAAGTGAACCAACCAATATTTGGATCATACTACATCTGACTGC
. : . : . : . : . : . :
rJMFF020G17+ TGTTATTTCTTGAAAAGCTGGGGAAAGCCATAGGGGCAACCTCTCTACAAGTACTGCACT
rJMFF023I02+ TGTTATTTCTTGAAAAGCTGGGGAAAGCCATAGGGGCAACCTCTCTACAAGTACTGCACT
rJMFF009P01+ TGTTATTTCTTGAAAAGCTGGGGAAAGCCATAGGGGCAACCTCTCTACAAGTACTGCACT
rJMFF043H20+ TGTTATTTCTTGAAAAGCTGGGGAAAGCCATAGGGGCAACCTCTCTACAAGTACTGCACT
____________________________________________________________
consensus TGTTATTTCTTGAAAAGCTGGGGAAAGCCATAGGGGCAACCTCTCTACAAGTACTGCACT
. : . : . : . : . : . :
rJMFF020G17+ TTGCATTGCACAATGAACTTGTTGTCAGTGAAGCTAGAGATATTTTTCGTTTTCTCGTTT
rJMFF023I02+ TTGCATTGCACAATGAACTTGTTGTCAGTGAAGCTAGAGATATTTTTCGTTTTCTCGTTT
rJMFF009P01+ TTGCATTGCACAATGAACTTGTTGTCAGTGAAGCTAGAGATATTTTTCGTTTTCTCGTTT
rJMFF043H20+ TTGCATTGCACAATGAACTTGTTGTCAGTGAAGCTAGAGATATTTTTCGTTTTCTCGTTT
____________________________________________________________
consensus TTGCATTGCACAATGAACTTGTTGTCAGTGAAGCTAGAGATATTTTTCGTTTTCTCGTTT
. : . : . : . : . : . :
rJMFF020G17+ ACTATTTGTTAGAGCCATTCTTTCTTGTATGGGTCAATTTTGTGTATGATTGCTCCTTAG
rJMFF023I02+ ACTATTTGTTAGAGCCATTCTTTCTTGTATGGGTCAATTTTGTGTATGATTGCTCCTTAG
rJMFF009P01+ ACTATTTGTTAGAGCCATTCTTTCTTGTATGGGTCAATTTTGTGTATGATTGCTCCTTAG
rJMFF043H20+ ACTATTTGTTAGAGCCATTCTTTCTTGTATGGGTCAATTTTGTGTATGATTGCTCCTTAG
rJMFF046L23+ GAGCCATTCTTTCTTGTATGGGTCAATTTTGTGTATGATTGCTCCTTAG
____________________________________________________________
consensus ACTATTTGTTAGAGCCATTCTTTCTTGTATGGGTCAATTTTGTGTATGATTGCTCCTTAG
. : . : . : . : . : . :
rJMFF020G17+ AGACATATATGAAGTAACTGGAAGATTTTGCCTTCAAAT
rJMFF023I02+ AGACATATATGAAGTAACTGGAAGATTTTGCCTTCAAATT
rJMFF009P01+ AGACATATATGAAGTAACTGGAAGATTTTGCCTTCAAATT
rJMFF043H20+ AGACATATATGAAGTAACTGGAAGATTTTGCCTTCAAATTTCAACTGCTATTTTCTGGAC
rJMFF046L23+ AGACATATATGAAGTAACTGGAAGATTTTGCCTTCAAATTTCAACTGCTATTTTCTGGAC
____________________________________________________________
consensus AGACATATATGAAGTAACTGGAAGATTTTGCCTTCAAATTTCAACTGCTATTTTCTGGAC