| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046G13 | Sequence | 649 | 007475 (2) | gb|ADZ97022.2| | 5e-128 | EIL6, partial [Nicotiana tabacum] | 558 | 009814 (3) | ref|XP_002276380.1| | 4e-07 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Vitis vinifera] ref|XP_0106590 |
| JMFF048O03 | Sequence | 514 | 007475 (2) | ref|XP_009759370.1| | 2e-98 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Nicotiana sylvestris] | 502 | 009814 (3) | ref|XP_002276380.1| | 2e-06 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Vitis vinifera] ref|XP_0106590 |
| JMSF015J03 | Sequence | 242 | 019958 | ref|XP_011091876.1| | 1e-17 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Sesamum indicum] | 736 | 009814 (3) | ref|XP_010106127.1| | 4e-17 | Protein ETHYLENE INSENSITIVE 3 [Morus notabilis] gb|EXC07787.1| Protein ETHYLENE |
This contig is upended
. : . : . : . : . : . :
rJMSF015J03+ CAAAACCTTGGCACGCTAAA
____________________________________________________________
consensus CAAAACCTTGGCACGCTAAA
. : . : . : . : . : . :
rJMSF015J03+ CTACCAAGTAAATAATAGCAAACAAGCAGTTTACTCATCGATGGCGCCCAAACCACCTGG
____________________________________________________________
consensus CTACCAAGTAAATAATAGCAAACAAGCAGTTTACTCATCGATGGCGCCCAAACCACCTGG
. : . : . : . : . : . :
rJMSF015J03+ TGCATCAGCGATATCTTCCTCGCCCATGGACGTTTCTACCCTTGGACTACCCGAAGACGA
____________________________________________________________
consensus TGCATCAGCGATATCTTCCTCGCCCATGGACGTTTCTACCCTTGGACTACCCGAAGACGA
. : . : . : . : . : . :
rJMSF015J03+ CGAAAGGGCGATTTCTGAACTTCTGTCGTTTTATGATAACAATCTTCAACAAAACGGAGG
____________________________________________________________
consensus CGAAAGGGCGATTTCTGAACTTCTGTCGTTTTATGATAACAATCTTCAACAAAACGGAGG
. : . : . : . : . : . :
rJMSF015J03+ CTTCAATTCCGGGAATCTTAATAATGGCGTTGAACTTCACGTGGAAGACTACTTCTCAAC
rJMFF046G13+ GGAAGACTACTTCTCAAC
____________________________________________________________
consensus CTTCAATTCCGGGAATCTTAATAATGGCGTTGAACTTCACGTGGAAGACTACTTCTCAAC
. : . : . : . : . : . :
rJMSF015J03+ TGCGGGAGGTGGAGTGTTTCAGCCGCAAGCAAATATGCCCGTGACTCACTCGGTTTTGCC
rJMFF048O03+ GAGTGTNTCAGCCGCAAGCAAATATGCCCGTGACTCACTCGGTTTTGCC
rJMFF046G13+ TGCGGGAGGTGGAGTGTTTCAGCCGCAAGCAAATATGCCCGTGACTCACTCGGTTTTGCC
____________________________________________________________
consensus TGCGGGAGGTGGAGTGTTTCAGCCGCAAGCAAATATGCCCGTGACTCACTCGGTTTTGCC
. : . : . : . : . : . :
rJMSF015J03+ ATCAACTGGAACCCAATATGAATCTGGCTTCAATAGGAACTCGAGCGATATTGGTGATTT
rJMFF048O03+ ATCAACTGGAACCCAATATGAATCTGGCTTCAATAGGAACTCGAGCGATATTGGTGATTT
rJMFF046G13+ ATCAACTGGAACCCAATATGAATCTGGCTTCAATAGGAACTCGAGCGATATTGGTGATTT
____________________________________________________________
consensus ATCAACTGGAACCCAATATGAATCTGGCTTCAATAGGAACTCGAGCGATATTGGTGATTT
. : . : . : . : . : . :
rJMSF015J03+ TAAGTTCGGTTCCTCGTGCAATTTGGTTGATTATTCAACGGATCAGCTTCCGAAGCAGGA
rJMFF048O03+ TAAGTTCGGTTCCTCGTGCAATTTGGTTGATTATTCAACGGATCAGCTTCCGAAGCAGGA
rJMFF046G13+ TAAGTTCGGTTCCTCGTGCAATTTGGTTGATTATTCAACGGATCAGCTTCCGAAGCAGGA
____________________________________________________________
consensus TAAGTTCGGTTCCTCGTGCAATTTGGTTGATTATTCAACGGATCAGCTTCCGAAGCAGGA
. : . : . : . : . : . :
rJMSF015J03+ TGGATCCACATGGTACTTCTGAAACCAGGTAGGATCTATCCAATTGCTCCAAAGGAATCA
rJMFF048O03+ TGGATCCACATGGTACTTCTGAAACCAGGTAGGATCTATCCAATTGCTCCAAAGGAATCA
rJMFF046G13+ TGGATCCACATGGTACTTCTGAAACCAGGTAGGATCTATCCAATTGCTCCAAAGGAATCA
____________________________________________________________
consensus TGGATCCACATGGTACTTCTGAAACCAGGTAGGATCTATCCAATTGCTCCAAAGGAATCA
. : . : . : . : . : . :
rJMSF015J03+ CCAATGCCTTAACTTTAAATAACTGTCGTAGATGTTAAAATACCGTACCATATGAAACTC
rJMFF048O03+ CCAATGCCTTAACTTTAAATAACTGTCGTAGATGTTAAAATACCGTACCATATGAAACTC
rJMFF046G13+ CCAATGCCTTAACTTTAAATAACTGTCGTAGATGTTAAAATACCGTACCATATGAAACTC
____________________________________________________________
consensus CCAATGCCTTAACTTTAAATAACTGTCGTAGATGTTAAAATACCGTACCATATGAAACTC
. : . : . : . : . : . :
rJMSF015J03+ CTATCGAGCCTATATATGCTGCAAAACCTTTTATGTAGTTTTGGAACTATATATATATAT
rJMFF048O03+ CTATCGAGCCTATATATGCTGCAAAACCTTTTATGTAGTTTTGGAACTATATATATATAT
rJMFF046G13+ CTATCGAGCCTATATATGCTGCAAAACCTTTTATGTAGTTTTGGAACTATATATATATAT
____________________________________________________________
consensus CTATCGAGCCTATATATGCTGCAAAACCTTTTATGTAGTTTTGGAACTATATATATATAT
. : . : . : . : . : . :
rJMSF015J03+ ATATAATTGATGAACTATATATCAAAATGGGCAAAGAGCTCTGATCTGAAGATGACAACC
rJMFF048O03+ ATATAATTGATGAACTATATATCAAAATGGGCAAAGAGCTCTGATCTGAAGATGACAACC
rJMFF046G13+ ATATAATTGATGAACTATATATCAAAATGGGCAAAGAGCTCTGATCTGAAGATGACAACC
____________________________________________________________
consensus ATATAATTGATGAACTATATATCAAAATGGGCAAAGAGCTCTGATCTGAAGATGACAACC
. : . : . : . : . : . :
rJMSF015J03+ TTGCTCTCTTCCCCTCTTGTCCTTGTTGTTCTTAGGATGTACTTTTGT
rJMFF048O03+ TTGCTCTCTTCCCCTCTTGTCCTTGTTGTTCTTAGGATGTACTTTTGTTATCTCAATATC
rJMFF046G13+ TTGCTCTCTTCCCCTCTTGTCCTTGTTGTTCTTAGGATGTACTTTTGTTATCTCAATATC
____________________________________________________________
consensus TTGCTCTCTTCCCCTCTTGTCCTTGTTGTTCTTAGGATGTACTTTTGTTATCTCAATATC
. : . : . : . : . : . :
rJMFF048O03+ AATATCAATGTATATTATACTTGATTAAGATGC
rJMFF046G13+ AATATCAATGTATATTATACTTGATTAAGATGCAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AATATCAATGTATATTATACTTGATTAAGATGCAAAAAAAAAAAAAAAACTCTCCAGGGT