| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005N13 | Sequence | 152 | 008864 (3) | ref|XP_009611483.1| | 3e-14 | PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Nicotiana tomentosifo | 668 | 009813 (3) | ref|XP_009801800.1| | 2e-71 | PREDICTED: 24-methylenesterol C-methyltransferase 2 [Nicotiana sylvestris] gb|A |
| JMFF044F08 | Sequence | 682 | 008864 (3) | ref|XP_011092953.1| | 4e-126 | PREDICTED: 24-methylenesterol C-methyltransferase 2 [Sesamum indicum] | 500 | 009813 (3) | ref|XP_011092953.1| | 2e-41 | PREDICTED: 24-methylenesterol C-methyltransferase 2 [Sesamum indicum] |
| JMFF046G02 | Sequence | 546 | 008864 (3) | ref|XP_011092953.1| | 1e-110 | PREDICTED: 24-methylenesterol C-methyltransferase 2 [Sesamum indicum] | 471 | 009813 (3) | emb|CDP14537.1| | 6e-21 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF005N13+ TGTACCGCCCGGAGAACCCGGAACACGTGGATATTATCCA
____________________________________________________________
consensus TGTACCGCCCGGAGAACCCGGAACACGTGGATATTATCCA
. : . : . : . : . : . :
rJMFF005N13+ CGGGATTGAGCGGGGCGACGCCCTCCCCGGACTGCGGAACTACAAGGACATCCCCGAGAT
____________________________________________________________
consensus CGGGATTGAGCGGGGCGACGCCCTCCCCGGACTGCGGAACTACAAGGACATCCCCGAGAT
. : . : . : . : . : . :
rJMFF044F08+ GGATTTAGTTAAGCCGCCGGCCAA
rJMFF005N13+ CGCCAGGAAAGTGGGTTTCGAGATCGTCAAGGAAAAGGATTTAGCTAAGCCGCCGGCCAA
____________________________________________________________
consensus CGCCAGGAAAGTGGGTTTCGAGATCGTCAAGGAAAAGGATTTAGTTAAGCCGCCGGCCAA
. : . : . : . : . : . :
rJMFF044F08+ ACCGTGGTGGACAAGACTCAAGATGGGAAGAATCGCTTACTGGCGCAACCATATCTTGGT
rJMFF005N13+ ACCGTGGTGGACAAGACTCAAGATGGGAAGAATCGCTTACTGGCGCAACCATATCTTGGT
____________________________________________________________
consensus ACCGTGGTGGACAAGACTCAAGATGGGAAGAATCGCTTACTGGCGCAACCATATCTTGGT
. : . : . : . : . : . :
rJMFF044F08+ CACCATTCTCGCCTGGCTTGGGATTGCCCCCAAGGGCACAGTTGATGTCCATGAAATGCT
rJMFF005N13+ CACCATTCTCGCCTGGCTTGGGATTGCCCCCAAGGGCACAGTTGATGTCCATGAAATGCT
rJMFF046G02+ CGCCTGGCTTGGGATTGCCCCCAAGGGCACAGTTGATGTCCATGAAATGCT
____________________________________________________________
consensus CACCATTCTCGCCTGGCTTGGGATTGCCCCCAAGGGCACAGTTGATGTCCATGAAATGCT
. : . : . : . : . : . :
rJMFF044F08+ GTTCGTGACTGCCGATTATTTGACGAAAGGTGGAGACTCTGGGATTTTCAGTCCGATGCA
rJMFF005N13+ GTTCGTGACTGCCGATTATTTGACGAAAGGTGGAGACTCTGGGATTTTCAGTCCGATGCA
rJMFF046G02+ GTTCGTGACTGCCGATTATTTGACGAAAGGTGGAGACTCTGGGATTTTCAGTCCGATGCA
____________________________________________________________
consensus GTTCGTGACTGCCGATTATTTGACGAAAGGTGGAGACTCTGGGATTTTCAGTCCGATGCA
. : . : . : . : . : . :
rJMFF044F08+ TATGATTCTCTGCAGAAAGCCCGAGCATTAGCAACCCCACCCACCTGCAATGTAATACGT
rJMFF005N13+ TATGATTCTCTGCAGAAAGCCCGAGCATTAGCAACCCCACCCACCTGCAATGTAATACGT
rJMFF046G02+ TATGATTCTCTGCAGAAAGCCCGAGCATTAGCAACCCCACCCACCTGCAATGTAATACGT
____________________________________________________________
consensus TATGATTCTCTGCAGAAAGCCCGAGCATTAGCAACCCCACCCACCTGCAATGTAATACGT
. : . : . : . : . : . :
rJMFF044F08+ AGAGATTGACCATGGAGGTTAATTTCGCCTTGTTGTCCCTACACCCACCCACCCACCCTT
rJMFF005N13+ AGAGATTGACCATGGAGGTTAATTTCGCCTTGTTGTCCCTACCCCCACCCACCCACCCTT
rJMFF046G02+ AGAGATTGACCATGGAGGTTAATTTCGCCTTGTTGTCCCTACCCCCACCCACCCACCCTT
____________________________________________________________
consensus AGAGATTGACCATGGAGGTTAATTTCGCCTTGTTGTCCCTACCCCCACCCACCCACCCTT
. : . : . : . : . : . :
rJMFF044F08+ TGTTTTTTTTGGTTATCTATCTGTTCTCTTATTTCAGCTTATTGGATTTAATTTCATGTT
rJMFF005N13+ TGTTTTTTTTGGTTATCTATCTGTTCTCTTATTTCAGCTTATTGGATTTAATTTCATGTT
rJMFF046G02+ TGTTTTTTTTGGTTATCTATCTGTTCTCTTATTTCAGCTTATTGGATTTAATTTCATGTT
____________________________________________________________
consensus TGTTTTTTTTGGTTATCTATCTGTTCTCTTATTTCAGCTTATTGGATTTAATTTCATGTT
. : . : . : . : . : . :
rJMFF044F08+ GCTTTGCTTTTCTCTAGTTTGAATCTCTAGCTTTGATAGTTACACTTCTTAATTATCTCT
rJMFF005N13+ GCTTTGCTTTTCTCTAGTTTGAATCTCTAGCTTTGATAGTTACACTTCTTAATTATCTCT
rJMFF046G02+ GCTTTGCTTTTCTCTAGTTTGAATCTCTAGCTTTGATAGTTACACTTCTTAATTATCTCT
____________________________________________________________
consensus GCTTTGCTTTTCTCTAGTTTGAATCTCTAGCTTTGATAGTTACACTTCTTAATTATCTCT
. : . : . : . : . : . :
rJMFF044F08+ TAGTTTTTGGAAGCCTGAAGTCCAAAGATCCTATCTTTAATTATTGTAAGAGGGAA
rJMFF005N13+ TAGTTTTTGGAAGCCTGAAGTCCAAAGATCCTATCTTTAATTATTGTAAGAGGGAAATCA
rJMFF046G02+ TAGTTTTTGGAAGCCTGAAGTCCAAAGATCCTATCTTTAATTATTGTAAGAGGGAAATCA
____________________________________________________________
consensus TAGTTTTTGGAAGCCTGAAGTCCAAAGATCCTATCTTTAATTATTGTAAGAGGGAAATCA
. : . : . : . : . : . :
rJMFF005N13+ ATTCAGAACTTGACAAAT
rJMFF046G02+ ATTCAGAACTTGACAAATTCCTCCTTGAACTTGTTTAATTTAGGCTATTGAGTTGGGTTT
____________________________________________________________
consensus ATTCAGAACTTGACAAATTCCTCCTTGAACTTGTTTAATTTAGGCTATTGAGTTGGGTTT