Contig 009812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P13Sequence126009812 (9)gb|KDO65844.1|3e-09hypothetical protein CISIN_1g0115532mg, partial [Citrus sinensis]
JMFF010P08Sequence436010922 (15)ref|XP_009592455.1|1e-72PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia740009812 (9)ref|XP_009591299.1|6e-114PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF021E15Sequence483010922 (15)ref|XP_009592455.1|2e-86PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia735009812 (9)ref|XP_009591299.1|1e-112PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF026O22Sequence565010922 (15)ref|XP_009802140.1|4e-108PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves740009812 (9)ref|XP_009591299.1|3e-111PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF026P09Sequence722009812 (9)ref|XP_009591299.1|1e-114PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF027C14Sequence502010922 (15)ref|XP_009592455.1|6e-96PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia745009812 (9)ref|XP_009591299.1|1e-115PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF046F11Sequence581010922 (15)ref|XP_009802140.1|3e-97PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves323009812 (9)gb|AFK42587.1|8e-22unknown [Medicago truncatula]
JMSF045M10Sequence782010922 (15)ref|XP_009802140.1|2e-167PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves738009812 (9)ref|XP_009591299.1|1e-117PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMSF050A17Sequence693010922 (15)ref|XP_009802140.1|5e-136PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves731009812 (9)ref|XP_009591299.1|2e-113PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF026P09+ GGAAGTGAACTGATACAGAAGTACTTGGG
rJMSF045M10+ TCTTGCGTGNTGTTGGAAGTGAACTGATACAGAAGTACTTGGG
rJMSF050A17+ ACTGATACAGAAGTACTTGGG
rJMFF027C14+ GGAAGTGAACTGATACAGAAGTACTTGGG
rJMFF021E15+ TGATACAGAAGTACTTGGG
rJMFF026O22+ AAGTACTTGGG
rJMFF010P08+ GAACTGATACAGAAGTACTTGGG
                      ____________________________________________________________
consensus TCTTGCGTGNTGTTGGAAGTGAACTGATACAGAAGTACTTGGG
 
. : . : . : . : . : . :
rJMFF026P09+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACNTGCTAT
rJMSF045M10+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMSF050A17+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF027C14+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF021E15+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF026O22+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF010P08+ AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
                      ____________________________________________________________
consensus AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
 
. : . : . : . : . : . :
rJMFF026P09+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMSF045M10+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMSF050A17+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF027C14+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF021E15+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF026O22+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF010P08+ TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
                      ____________________________________________________________
consensus TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
 
. : . : . : . : . : . :
rJMFF026P09+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMSF045M10+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMSF050A17+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF027C14+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF021E15+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF026O22+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF010P08+ TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
                      ____________________________________________________________
consensus TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
 
. : . : . : . : . : . :
rJMFF026P09+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMSF045M10+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMSF050A17+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF027C14+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF021E15+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF026O22+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF010P08+ ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
                      ____________________________________________________________
consensus ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
 
. : . : . : . : . : . :
rJMFF026P09+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMSF045M10+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMSF050A17+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF027C14+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF021E15+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF026O22+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF010P08+ GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
                      ____________________________________________________________
consensus GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
 
. : . : . : . : . : . :
rJMFF026P09+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF009P13+ TAGA
rJMSF045M10+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMSF050A17+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF027C14+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF021E15+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF026O22+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF010P08+ GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
                      ____________________________________________________________
consensus GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
 
. : . : . : . : . : . :
rJMFF026P09+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF009P13+ AGAGTTTGTCATGACAAAANACGAGTTTTCNGGAGCCGATATCAAGGCCATTTGTNCTGA
rJMSF045M10+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMSF050A17+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF027C14+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF021E15+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF026O22+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF010P08+ AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF046F11+ CGATATCAAGGCCATTTGTACTGA
                      ____________________________________________________________
consensus AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
 
. : . : . : . : . : . :
rJMFF026P09+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF009P13+ AGNNGGATTGCTNNCNTTAAGAGAGAGG
rJMSF045M10+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMSF050A17+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF027C14+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF021E15+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF026O22+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF010P08+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF046F11+ AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCGAGAA
                      ____________________________________________________________
consensus AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
 
. : . : . : . : . : . :
rJMFF026P09+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMSF045M10+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMSF050A17+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF027C14+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF021E15+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAGGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF026O22+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF010P08+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAGGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF046F11+ AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
                      ____________________________________________________________
consensus AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
 
. : . : . : . : . : . :
rJMFF026P09+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMSF045M10+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMSF050A17+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF027C14+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF021E15+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF026O22+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF010P08+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF046F11+ GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTTTTCCCTTTATA
                      ____________________________________________________________
consensus GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
 
. : . : . : . : . : . :
rJMFF026P09+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMSF045M10+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMSF050A17+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF027C14+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF021E15+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF026O22+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF010P08+ TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF046F11+ TCAGCTTTCTGTAAACATTAAAAGCTTTGCTTCACAACATTGATGAAATCTGTAGCCATC
                      ____________________________________________________________
consensus TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
 
. : . : . : . : . : . :
rJMFF026P09+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCAC
rJMSF045M10+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCACAT
rJMSF050A17+ TGTACTATGTGAGAACACCATGGCCCCGTCTCACATCACTGCTTT
rJMFF027C14+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT
rJMFF021E15+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT
rJMFF026O22+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT
rJMFF010P08+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT
rJMFF046F11+ TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTTTATG
                      ____________________________________________________________
consensus TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTTTATG