Contig 009812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P13Sequence126009812 (9)gb|KDO65844.1|3e-09hypothetical protein CISIN_1g0115532mg, partial [Citrus sinensis]
JMFF010P08Sequence436010922 (15)ref|XP_009592455.1|1e-72PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia740009812 (9)ref|XP_009591299.1|6e-114PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF021E15Sequence483010922 (15)ref|XP_009592455.1|2e-86PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia735009812 (9)ref|XP_009591299.1|1e-112PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF026O22Sequence565010922 (15)ref|XP_009802140.1|4e-108PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves740009812 (9)ref|XP_009591299.1|3e-111PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF026P09Sequence722009812 (9)ref|XP_009591299.1|1e-114PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF027C14Sequence502010922 (15)ref|XP_009592455.1|6e-96PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia745009812 (9)ref|XP_009591299.1|1e-115PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMFF046F11Sequence581010922 (15)ref|XP_009802140.1|3e-97PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves323009812 (9)gb|AFK42587.1|8e-22unknown [Medicago truncatula]
JMSF045M10Sequence782010922 (15)ref|XP_009802140.1|2e-167PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves738009812 (9)ref|XP_009591299.1|1e-117PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis
JMSF050A17Sequence693010922 (15)ref|XP_009802140.1|5e-136PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves731009812 (9)ref|XP_009591299.1|2e-113PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis

Alignment

This contig is upended


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rJMFF026P09+                                         GGAAGTGAACTGATACAGAAGTACTTGGG
rJMSF045M10+                           TCTTGCGTGNTGTTGGAAGTGAACTGATACAGAAGTACTTGGG
rJMSF050A17+                                                 ACTGATACAGAAGTACTTGGG
rJMFF027C14+                                         GGAAGTGAACTGATACAGAAGTACTTGGG
rJMFF021E15+                                                   TGATACAGAAGTACTTGGG
rJMFF026O22+                                                           AAGTACTTGGG
rJMFF010P08+                                               GAACTGATACAGAAGTACTTGGG
                      ____________________________________________________________
consensus                              TCTTGCGTGNTGTTGGAAGTGAACTGATACAGAAGTACTTGGG
 
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rJMFF026P09+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACNTGCTAT
rJMSF045M10+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMSF050A17+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF027C14+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF021E15+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF026O22+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
rJMFF010P08+          AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
                      ____________________________________________________________
consensus             AGATGGTCCCAAATTGGTGAGAGAGCTATTTAGGGTTGCTGATGAACTCTCACCTGCTAT
 
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rJMFF026P09+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMSF045M10+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMSF050A17+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF027C14+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF021E15+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF026O22+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
rJMFF010P08+          TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
                      ____________________________________________________________
consensus             TGTCTTTATTGATGAAATTGATGCGGTTGGTACCAAAAGGTATGATGCACACTCGGGTGG
 
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rJMFF026P09+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMSF045M10+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMSF050A17+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF027C14+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF021E15+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF026O22+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
rJMFF010P08+          TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
                      ____________________________________________________________
consensus             TGAGCGTGAAATTCAGCGTACCATGCTTGAACTGCTTAACCAGCTAGATGGTTTTGACTC
 
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rJMFF026P09+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMSF045M10+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMSF050A17+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF027C14+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF021E15+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF026O22+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
rJMFF010P08+          ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
                      ____________________________________________________________
consensus             ACGGGGAGATGTGAAGGTAATCCTAGCCACTAATAAGATTGAGAGCCTTGATCCTGCCCT
 
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rJMFF026P09+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMSF045M10+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMSF050A17+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF027C14+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF021E15+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF026O22+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
rJMFF010P08+          GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
                      ____________________________________________________________
consensus             GCTTCGACCTGGCAGAATTGACAGGAAAATTGAATTTCCTCTTCCTGATATCAAAACAAG
 
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rJMFF026P09+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF009P13+                                                                  TAGA
rJMSF045M10+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMSF050A17+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF027C14+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF021E15+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF026O22+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
rJMFF010P08+          GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
                      ____________________________________________________________
consensus             GCGGAGGATTTTCCAGATACACACAGCAAGGATGACCCTGGCTGATGATGTCAACTTAGA
 
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rJMFF026P09+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF009P13+          AGAGTTTGTCATGACAAAANACGAGTTTTCNGGAGCCGATATCAAGGCCATTTGTNCTGA
rJMSF045M10+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMSF050A17+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF027C14+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF021E15+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF026O22+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF010P08+          AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
rJMFF046F11+                                              CGATATCAAGGCCATTTGTACTGA
                      ____________________________________________________________
consensus             AGAGTTTGTCATGACAAAAGACGAGTTTTCTGGAGCCGATATCAAGGCCATTTGTACTGA
 
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rJMFF026P09+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF009P13+          AGNNGGATTGCTNNCNTTAAGAGAGAGG                                
rJMSF045M10+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMSF050A17+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF027C14+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF021E15+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF026O22+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF010P08+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
rJMFF046F11+          AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCGAGAA
                      ____________________________________________________________
consensus             AGCTGGATTGCTCGCGTTAAGAGAGAGGCGTATGAAGGTAACTCATGCTGATTTCAAGAA
 
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rJMFF026P09+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMSF045M10+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMSF050A17+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF027C14+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF021E15+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAGGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF026O22+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF010P08+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAGGAGGGAGTCCCTGAAGGGCTTTACATGTA
rJMFF046F11+          AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
                      ____________________________________________________________
consensus             AGCCAAGGACAAGGTGATGTTCAAGAAGAAAGAGGGAGTCCCTGAAGGGCTTTACATGTA
 
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rJMFF026P09+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMSF045M10+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMSF050A17+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF027C14+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF021E15+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF026O22+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF010P08+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
rJMFF046F11+          GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTTTTCCCTTTATA
                      ____________________________________________________________
consensus             GTGAAGAATTACTTTTCTCAATTTGTACGGTGGCATTCAATGCTCCTTCTTCCCTTTATA
 
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rJMFF026P09+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMSF045M10+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMSF050A17+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF027C14+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF021E15+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF026O22+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF010P08+          TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
rJMFF046F11+          TCAGCTTTCTGTAAACATTAAAAGCTTTGCTTCACAACATTGATGAAATCTGTAGCCATC
                      ____________________________________________________________
consensus             TCAGCTTTCTGTAAACATTAAAAGCTCTGCTTCACAACATTGATGAAATCTGTAGCCATC
 
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rJMFF026P09+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCAC                          
rJMSF045M10+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCACAT                        
rJMSF050A17+          TGTACTATGTGAGAACACCATGGCCCCGTCTCACATCACTGCTTT               
rJMFF027C14+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT    
rJMFF021E15+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT    
rJMFF026O22+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT    
rJMFF010P08+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTT    
rJMFF046F11+          TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTTTATG
                      ____________________________________________________________
consensus             TGTACTATGTGAGAACA-CATGGCCCCGTCTCACATCACTGCTTTTGGCTCAATTTTATG