Contig 009811:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046E21Sequence621003608 (3)ref|XP_011072744.1|4e-22PREDICTED: GATA transcription factor 28 [Sesamum indicum]611009811 (2)ref|XP_007023733.1|5e-42ZIM-like 1 [Theobroma cacao] gb|EOY26355.1| ZIM-like 1 [Theobroma cacao]
JMSF013M20Sequence489003608 (3)749009811 (2)gb|KDO41401.1|9e-10hypothetical protein CISIN_1g022728mg [Citrus sinensis]

Alignment

This contig is upended


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rJMSF013M20+                        TCAGCGAGAAAGTTACTCCAATGATGCGACGTGGACCAGAAGGACC
                      ____________________________________________________________
consensus                           TCAGCGAGAAAGTTACTCCAATGATGCGACGTGGACCAGAAGGACC
 
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rJMSF013M20+          TAGGACACTTTGTAATGCTTGTGGACTAATGTGGGCAAATAAGGTGATCATTACACTTGT
                      ____________________________________________________________
consensus             TAGGACACTTTGTAATGCTTGTGGACTAATGTGGGCAAATAAGGTGATCATTACACTTGT
 
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rJMSF013M20+          TTGATGCATCCTGTTTGGGATTGTGCTTGTACATACCGAATGGACACTCAACTAGGGGAC
                      ____________________________________________________________
consensus             TTGATGCATCCTGTTTGGGATTGTGCTTGTACATACCGAATGGACACTCAACTAGGGGAC
 
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rJMSF013M20+          TGATATGAGCTCTTCCGCTCTTATCAATATCAGTCATTTCAGAGCTAATATCTACTACTT
                      ____________________________________________________________
consensus             TGATATGAGCTCTTCCGCTCTTATCAATATCAGTCATTTCAGAGCTAATATCTACTACTT
 
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rJMSF013M20+          CTATCCTTAATCCATTTGCCTAAATGTTACAATTATAGTTTGTGTGGAGTATTATTTTCT
                      ____________________________________________________________
consensus             CTATCCTTAATCCATTTGCCTAAATGTTACAATTATAGTTTGTGTGGAGTATTATTTTCT
 
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rJMSF013M20+          ATAATCATAAATCATGTATTTTTACTCAACATATGTACTATAATGATGTTATGTTGGAAA
                      ____________________________________________________________
consensus             ATAATCATAAATCATGTATTTTTACTCAACATATGTACTATAATGATGTTATGTTGGAAA
 
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rJMSF013M20+          GTGGTCACACCAGAAAGGGTAGTTGGATCTTTTCCTTTTTTGCTTAATAGTTCAGCAAGC
                      ____________________________________________________________
consensus             GTGGTCACACCAGAAAGGGTAGTTGGATCTTTTCCTTTTTTGCTTAATAGTTCAGCAAGC
 
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rJMSF013M20+          TACCTAATTTACCCTCACATCTGCTCGTGTTTACTGCAGGGAACTCTCAGAGATCTTTCA
rJMFF046E21+                                               AGGGAACTCTCAGAGATCTTTCA
                      ____________________________________________________________
consensus             TACCTAATTTACCCTCACATCTGCTCGTGTTTACTGCAGGGAACTCTCAGAGATCTTTCA
 
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rJMSF013M20+          AAGACAGTGGTGCCCCCACTAGGGCATAGTACATCCCTTCACCGAAGTGAAGAGAATGGA
rJMFF046E21+          AAGACAGTGGTGCCCCCACTAGGGCATAGTACATCCCTTCACCGAAGTGAAGAGAATGGA
                      ____________________________________________________________
consensus             AAGACAGTGGTGCCCCCACTAGGGCATAGTACATCCCTTCACCGAAGTGAAGAGAATGGA
 
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rJMSF013M20+          AATGTCGAGGCTTCTCAAATGATTAGAGGCACAGAGAACGGTGATGACTCGCTATGACTT
rJMFF046E21+          AATGTCGAGGCTTCTCAAATGATTAGAGGCACAGAGAACGGTGATGACTCGCTATGACTT
                      ____________________________________________________________
consensus             AATGTCGAGGCTTCTCAAATGATTAGAGGCACAGAGAACGGTGATGACTCGCTATGACTT
 
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rJMSF013M20+          CATTACATGTATGATTAAACCAAAACGACTGTATGATAGCCCCTCTAGATTGGAATATGT
rJMFF046E21+          CATTACATGTATGATTAAACCAAAACGACTGTATGATAGCCCCTCTAGATTGGAATATGT
                      ____________________________________________________________
consensus             CATTACATGTATGATTAAACCAAAACGACTGTATGATAGCCCCTCTAGATTGGAATATGT
 
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rJMSF013M20+          TCTTAACTTGTTATCCTGTCATTTCATCAGTTCAAGTTTGATTCTAGTTTCTAGGTTTTG
rJMFF046E21+          TCTTAACTTGTTATCCTGTCATTTCATCAGTTCAAGTTTGATTCTAGTTTCTAGGTTTTG
                      ____________________________________________________________
consensus             TCTTAACTTGTTATCCTGTCATTTCATCAGTTCAAGTTTGATTCTAGTTTCTAGGTTTTG
 
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rJMSF013M20+          TGATTTCTTCTGTAGCATCAACTCTGAACC                              
rJMFF046E21+          TGATTTCTTCTGTAGCATCAACTCTGAACCTGAGTGTAAAATGCATTGTTCAACATCAAA
                      ____________________________________________________________
consensus             TGATTTCTTCTGTAGCATCAACTCTGAACCTGAGTGTAAAATGCATTGTTCAACATCAAA
 
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rJMFF046E21+          GAAAAGCCAAGTTTTTTGCCAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             GAAAAGCCAAGTTTTTTGCCAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG