Contig 009809:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004L12Sequence508010140 (3)ref|XP_009609650.1|63.2PREDICTED: uncharacterized protein LOC104103447 [Nicotiana tomentosiformis] ref|731009809 (2)ref|XP_009620999.1|228PREDICTED: uncharacterized protein LOC104112705 [Nicotiana tomentosiformis]
JMFF046C17Sequence638010140 (3)emb|CDP05147.1|6e-12unnamed protein product [Coffea canephora]530009809 (2)emb|CDP05148.1|8e-28unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF004L12+                                                     TCTAGTGTTAGAAAGTT
                      ____________________________________________________________
consensus                                                        TCTAGTGTTAGAAAGTT
 
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rJMFF004L12+          GAAGAAGAAGCAAGTAAAAGATGAGTTGGACCGCATGAAACAGGCTGAGAAGAAAAAGAG
                      ____________________________________________________________
consensus             GAAGAAGAAGCAAGTAAAAGATGAGTTGGACCGCATGAAACAGGCTGAGAAGAAAAAGAG
 
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rJMFF004L12+          ACGCTTGGAGAAGGCATTGGCTACGTCTGCAGCGATTCGTTCTGAACTAGAAAAGAAGAA
                      ____________________________________________________________
consensus             ACGCTTGGAGAAGGCATTGGCTACGTCTGCAGCGATTCGTTCTGAACTAGAAAAGAAGAA
 
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rJMFF004L12+          AGAGAAGAAAAAGGAAGAACAGCAGAGGCTTGATGAAGAGGGTGCCGCTATTGCTGAAGC
                      ____________________________________________________________
consensus             AGAGAAGAAAAAGGAAGAACAGCAGAGGCTTGATGAAGAGGGTGCCGCTATTGCTGAAGC
 
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rJMFF004L12+          TGTGGCCTTGCACGTCCTACTTGGTGAAGATTCAGAAGATTCACACGATGTTATGCTAAA
                      ____________________________________________________________
consensus             TGTGGCCTTGCACGTCCTACTTGGTGAAGATTCAGAAGATTCACACGATGTTATGCTAAA
 
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rJMFF004L12+          AAAGGACGAGGGGTCAGACCTGTGGGATCATGGCAGGAATTTAGACATATTTATGGGTGG
rJMFF046C17+                    GGGTCAGACCTGTGGGATCATGGCAGGAATTTAGACATATTTATGGGTGG
                      ____________________________________________________________
consensus             AAAGGACGAGGGGTCAGACCTGTGGGATCATGGCAGGAATTTAGACATATTTATGGGTGG
 
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rJMFF004L12+          TGGAAGAAGAGCAGTATTTCCCCAACAGAACCTCACAAAATATTCATTTGAAGGAACAGA
rJMFF046C17+          TGGAAGAAGAGCAGTATTTCCCCAACAGAACCTCACAAAATATTCATTTGAAGGAACAGA
                      ____________________________________________________________
consensus             TGGAAGAAGAGCAGTATTTCCCCAACAGAACCTCACAAAATATTCATTTGAAGGAACAGA
 
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rJMFF004L12+          GTGGGTCACTAGGAACCAGACATTTGGATGGAAAGAATTGGGAAACCAGGATTGGATGGC
rJMFF046C17+          GTGGGTCACTAGGAACCAGACATTTGGATGGAAAGAATTGGGAAACCAGGATTGGATGGC
                      ____________________________________________________________
consensus             GTGGGTCACTAGGAACCAGACATTTGGATGGAAAGAATTGGGAAACCAGGATTGGATGGC
 
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rJMFF004L12+          CTCGTATGAACCTCGGGGAAGAGATCTCTACCAGCAATACTATGATGGGGGAAAAAATTG
rJMFF046C17+          CTCGTATGAACCTCGGGGAAGAGATCTCTACCAGCAATACTATGATGGGGGAAAAAATTG
                      ____________________________________________________________
consensus             CTCGTATGAACCTCGGGGAAGAGATCTCTACCAGCAATACTATGATGGGGGAAAAAATTG
 
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rJMFF004L12+          GGATATCACGGGGATTTCCCCCCAGTTGATAGCAGAGCAAGCTTTTTCTTCACTTCAGAT
rJMFF046C17+          GGATATCACGGGGATTTCCCCCCAGTTGATAGCAGAGCAAGCTTTTTCTTCACTTCAGAT
                      ____________________________________________________________
consensus             GGATATCACGGGGATTTCCCCCCAGTTGATAGCAGAGCAAGCTTTTTCTTCACTTCAGAT
 
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rJMFF004L12+          TGCCGAGGATGCACATGTGGGCACGTATATCTTTAATCAGGTATTAAGAGGATAAATGGT
rJMFF046C17+          TGCCGAGGATGCACATGTGGGCACGTATATCTTTAATCAGGTATTAAGAGGATAAATGGT
                      ____________________________________________________________
consensus             TGCCGAGGATGCACATGTGGGCACGTATATCTTTAATCAGGTATTAAGAGGATAAATGGT
 
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rJMFF004L12+          GGTACTAGTGTATCTTCTAGGCAGCTGGTTGCATTCCCAATTTGATGTTTTTGTGGTTTT
rJMFF046C17+          GGTACTAGTGTATCTTCTAGGCAGCTGGTTGCATTCCCAATTTGATGTTTTTGTGGTTTT
                      ____________________________________________________________
consensus             GGTACTAGTGTATCTTCTAGGCAGCTGGTTGCATTCCCAATTTGATGTTTTTGTGGTTTT
 
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rJMFF004L12+          GAATAATCATGTATATAAAACATCAAGCACACTATGTATCTTT                 
rJMFF046C17+          GAATAATCATGTATATAAAACATCAAGCACACTATGTATCTTTTGTTCACCGGTTGTAAT
                      ____________________________________________________________
consensus             GAATAATCATGTATATAAAACATCAAGCACACTATGTATCTTTTGTTCACCGGTTGTAAT
 
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rJMFF046C17+          GCTGCTGCATGTATGCCCCCAAGGCCTCTCTTTACGCTGAAATGTTTGTGGTTTGCGTGG
                      ____________________________________________________________
consensus             GCTGCTGCATGTATGCCCCCAAGGCCTCTCTTTACGCTGAAATGTTTGTGGTTTGCGTGG