Contig 009805:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF045J01-                                                                     AG
                      ____________________________________________________________
consensus                                                                       AG
 
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JMFF034M06-                ATTCCCTCTGTTCTGCATATCTCTCTGTCTATATATATATATAATCTCATCACTC
JMFF045J01-           CTCCTATTCCCTCTGTTCTGCATATCTCTCTGTCTATATATATATATAATCTCATCACTC
                      ____________________________________________________________
consensus             CTCCTATTCCCTCTGTTCTGCATATCTCTCTGTCTATATATATATATAATCTCATCACTC
 
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JMFF034M06-           TCTCTACTTCAAACTTGAAACCTAAAGTTTCTTCTTTTATGGACTGAAAAGGTGTTCGGA
JMFF045J01-           TCTCTACTTCAAACTTGAAACCTAAAGTTTCTTCTTTTATGGACTGAAAAGGTGTTCGGA
                      ____________________________________________________________
consensus             TCTCTACTTCAAACTTGAAACCTAAAGTTTCTTCTTTTATGGACTGAAAAGGTGTTCGGA
 
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JMFF034M06-           AATGGCTTCTTCTGAGAATTTGATGGCGATGGAGCCGTGGGGGGTTTTTCGTCCTGGGTT
JMFF045J01-           AATGGCTTCTTCTGAGAATTTGATGGCGATGGAGCCGTGGGGGGTTTTTCGTCCTGGGTT
                      ____________________________________________________________
consensus             AATGGCTTCTTCTGAGAATTTGATGGCGATGGAGCCGTGGGGGGTTTTTCGTCCTGGGTT
 
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JMFF034M06-           CGTTGATCCTTGGTTCGCCGACGTGTTTTCCGGTGAAACGGAGGCGCTGACTAAGGTGTT
JMFF045J01-           CGTTGATCCTTGGTTCGCCGACGTGTTTTCCGGTGAAACGGAGGCGCTGACTAAGGTGTT
                      ____________________________________________________________
consensus             CGTTGATCCTTGGTTCGCCGACGTGTTTTCCGGTGAAACGGAGGCGCTGACTAAGGTGTT
 
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JMFF034M06-           GCAGAAATCGATGTCGGATGCTCCGGGTGGCGGCGGCGCCGCCGGTTTTCAAGGCGGAGG
JMFF045J01-           GCAGAAATCGATGTCGGATGCTCC-GGTGGCGGCGGCGCCGCCGGTTTTCAAGGCGGAGG
                      ____________________________________________________________
consensus             GCAGAAATCGATGTCGGATGCTCCGGGTGGCGGCGGCGCCGCCGGTTTTCAAGGCGGAGG
 
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JMFF034M06-           AGATGCTGGTGGTGGGGACTCCCANCGCTTCCGGGCCGACNGTTTCGGGCGGGTC     
JMFF045J01-           AGATGCTGGTGGTGGGGACTCCCAGCGCTTCCGGGCCGACGGTTTCGGGCGGGTCGGAGA
                      ____________________________________________________________
consensus             AGATGCTGGTGGTGGGGACTCCCAGCGCTTCCGGGCCGACGGTTTCGGGCGGGTCGGAGA
 
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JMFF045J01-           ACGAGACGGCGGGGTCGAAGCGGCGGAGCGTGGGCGGCGGCGCGGCGAACGGGAAGATGA
rJMFF034M06+                                                        GAACGGGAAGATGA
                      ____________________________________________________________
consensus             ACGAGACGGCGGGGTCGAAGCGGCGGAGCGTGGGCGGCGGCGCGGCGAACGGGAAGATGA
 
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JMFF045J01-           AGAAGCGGAAGTCACGCGCGGCGAAGCGGTCCACCACGACGTACATCACCGCCGACGCCG
rJMFF034M06+          AGAAGCGGAAGTCACGCGCGGNGAAGCGGTCCACCANGACGTACATCACCGCNGACGCCG
rJMFF045J01+            AAGCGGAAGTCACGCGCGGCGAAGCGGTCCACCACGACGTACATCACCGCCGACGCCG
                      ____________________________________________________________
consensus             AGAAGCGGAAGTCACGCGCGGCGAAGCGGTCCACCACGACGTACATCACCGCCGACGCCG
 
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JMFF045J01-           CCCATTTCCGGCAGATGGTGCAGCAGGTCACCGGGTTNCAGTTCGGCGGGCACCTGCCGG
rJMFF034M06+          CCCATTTCCGGCAGATGGTGCAGCAGGTCACCGGGTTCAAGTTCGGCGGGCACCTGCCGG
rJMFF045J01+          CCCATTTCCGGCAGATGGTGCAGCAGGTCACCGGGTTCAAGTTCGGCGGGCACCTGCCGG
                      ____________________________________________________________
consensus             CCCATTTCCGGCAGATGGTGCAGCAGGTCACCGGGTTCAAGTTCGGCGGGCACCTGCCGG
 
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JMFF045J01-           TCGCCCCCATCCTGAAGCCGGAGCCTCAGCGCGCCGTTCAACGGCTCCAGCCGAGCGGCG
rJMFF034M06+          TCGCCCCCATCCTGAAGCCGGAGCCTCAGCGCGCCGTTCAACGGCTCCAGCCGAGCGGCG
rJMFF045J01+          TCGCCCCCATCCTGAAGCCGGAGCCTCAGCGCGCCGTTCAACGGCTCCAGCCGAGCGGCG
                      ____________________________________________________________
consensus             TCGCCCCCATCCTGAAGCCGGAGCCTCAGCGCGCCGTTCAACGGCTCCAGCCGAGCGGCG
 
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JMFF045J01-           CCTGCCTCCCCACTCT                                            
rJMFF034M06+          CCTGCCTCCCCACTCTCGACACCTCCGCTTTCTTGCTCGACCAGACCAAACCGCAACCGC
rJMFF045J01+          CCTGCCTCCCCACTCTGGACACCTCCGCTTTCTTGCTCGACCAGACCAAACCGCAACCGC
                      ____________________________________________________________
consensus             CCTGCCTCCCCACTCTGGACACCTCCGCTTTCTTGCTCGACCAGACCAAACCGCAACCGC
 
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rJMFF034M06+          AGACGGTGGACCCCACCACCCGCAACACCTTTACTCCAGCCGCCGGCGACGCTCATCTCT
rJMFF045J01+          AGACGGTGGACCCCACCA-CCGCAACACCTTTACTCCAGCCGCCGGCGACGCTCATCTCT
                      ____________________________________________________________
consensus             AGACGGTGGACCCCACCACCCGCAACACCTTTACTCCAGCCGCCGGCGACGCTCATCTCT
 
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rJMFF034M06+          CCTCCGCCGCCGCCGAGAATGGAAGCCGACGTCAGCTGCGCGTCAGCCTTCGACCTTGAC
rJMFF045J01+          CCTCCGCCGCCGCCGAGAATGGAAGCCGACGTCAGCTGCGCGTCAGCCTTCGCCCTTGAC
                      ____________________________________________________________
consensus             CCTCCGCCGCCGCCGAGAATGGAAGCCGACGTCAGCTGCGCGTCAGCCTTCGCCCTTGAC
 
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rJMFF034M06+          TTCTTCTCCAGCTTTCCCACTCTGGAGTCATGGAAAACAGTAATGTAGCCAAGGAACTAA
rJMFF045J01+          TTCTTCTCCAGCTTTCCCACTCTGGAGTCATGGAAACCAGTAATGTAGCCAAGGAACTAA
                      ____________________________________________________________
consensus             TTCTTCTCCAGCTTTCCCACTCTGGAGTCATGGAAACCAGTAATGTAGCCAAGGAACTAA
 
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rJMFF034M06+          GATAGACCGCGTTTGGCAACGTAAACTTCCTTAACTTGTGGGATAAAAGTTTAGGGAAAA
rJMFF045J01+          GATAGACCGCGTTTGGCAACGTAAACTTCCTTAACTTGTGGGATAAAAGTTTAGGGAAAA
                      ____________________________________________________________
consensus             GATAGACCGCGTTTGGCAACGTAAACTTCCTTAACTTGTGGGATAAAAGTTTAGGGAAAA
 
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rJMFF034M06+          TAGGGGAAGGGTATAATGGGAAAAAAATGTTCATATTTTTGTAGATGTCGGAGGGAAGGG
rJMFF045J01+          TAGGGGAAGGGTATAATGGGAAAAAAATGTTCATATTTTTGTAGATGTCGGAGGGAAGGG
                      ____________________________________________________________
consensus             TAGGGGAAGGGTATAATGGGAAAAAAATGTTCATATTTTTGTAGATGTCGGAGGGAAGGG
 
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rJMFF034M06+          AGTTGGGAGTCTTCAGTCTTTGTATTTTGTGTTCTGCAGAATCATTAGAATC        
rJMFF045J01+          AGTTGGGAGTCTTCAGTCTTTGTATTTTGTGTTCTGCAGAATCATTAGAATCTGAATCTC
                      ____________________________________________________________
consensus             AGTTGGGAGTCTTCAGTCTTTGTATTTTGTGTTCTGCAGAATCATTAGAATCTGAATCTC