| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001G16 | Sequence | 608 | 013561 (5) | ref|XP_008453712.1| | 3e-38 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis m | 769 | 009802 (6) | ref|XP_009615489.1| | 3e-94 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo |
| JMFF001K22 | Sequence | 584 | 013561 (5) | ref|XP_008453712.1| | 2e-33 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis m | 545 | 009802 (6) | ref|XP_009757147.1| | 2e-42 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo |
| JMFF045F11 | Sequence | 646 | 013561 (5) | ref|XP_008453712.1| | 5e-40 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis m | 628 | 009802 (6) | ref|XP_009615489.1| | 1e-46 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo |
| JMFS021B10 | Sequence | 629 | 009802 (6) | gb|EYU31146.1| | 5e-47 | hypothetical protein MIMGU_mgv1a002490mg [Erythranthe guttata] | |||||
| JMSF046A02 | Sequence | 682 | 013561 (5) | ref|XP_006343378.1| | 1e-42 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo | 832 | 009802 (6) | ref|XP_009615490.1| | 3e-93 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo |
| JMSF049O20 | Sequence | 679 | 013561 (5) | ref|XP_010317300.1| | 155 | PREDICTED: uncharacterized protein LOC104646015 [Solanum lycopersicum] | 784 | 009802 (6) | ref|XP_009615490.1| | 1e-96 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo |
This contig is upended
. : . : . : . : . : . :
JMFS021B10- GCCGAATCT
____________________________________________________________
consensus GCCGAATCT
. : . : . : . : . : . :
JMFS021B10- TCTAAAAGCAGATGGGCTAAGTGGAGACGTGGAGGTATCATAGGTGCAGCAGCATTGACA
____________________________________________________________
consensus TCTAAAAGCAGATGGGCTAAGTGGAGACGTGGAGGTATCATAGGTGCAGCAGCATTGACA
. : . : . : . : . : . :
JMFS021B10- GGAGGAACATTAATGGCGATTACTGGTGGTTTAGCTGCTCCAGCCATTGCTGCAGGGTTT
____________________________________________________________
consensus GGAGGAACATTAATGGCGATTACTGGTGGTTTAGCTGCTCCAGCCATTGCTGCAGGGTTT
. : . : . : . : . : . :
JMFS021B10- GGTGCTTTAGCTCCAACATTGGGAACTCTTGTTCCTGTGATTGGAGCAAGTGGGTTCGCT
____________________________________________________________
consensus GGTGCTTTAGCTCCAACATTGGGAACTCTTGTTCCTGTGATTGGAGCAAGTGGGTTCGCT
. : . : . : . : . : . :
JMFS021B10- GCGGTTGCCACTGCTGCAGGAAGTGTTGTTGGCTCTGTCGCAGTTGCTGCATCATTTGGA
____________________________________________________________
consensus GCGGTTGCCACTGCTGCAGGAAGTGTTGTTGGCTCTGTCGCAGTTGCTGCATCATTTGGA
. : . : . : . : . : . :
JMFS021B10- GCTGCCGGAGCGGGACTTACAGGGTCTAAAGTGGCTCGGAGAATGGGAGATGTTGATGAA
____________________________________________________________
consensus GCTGCCGGAGCGGGACTTACAGGGTCTAAAGTGGCTCGGAGAATGGGAGATGTTGATGAA
. : . : . : . : . : . :
JMFS021B10- TTTGAGTTTAAAACAATAGGGCAAAACCATAACAAAGGCCGGCTAGCAGTTGAGATATTA
____________________________________________________________
consensus TTTGAGTTTAAAACAATAGGGCAAAACCATAACAAAGGCCGGCTAGCAGTTGAGATATTA
. : . : . : . : . : . :
JMFS021B10- ATCACTGGATTTGTTTTCGAGGAGAGTGATTTTTTTAGACCTTGGGAAGGCGAATACAAT
____________________________________________________________
consensus ATCACTGGATTTGTTTTCGAGGAGAGTGATTTTTTTAGACCTTGGGAAGGCGAATACAAT
. : . : . : . : . : . :
JMFS021B10- AACTTGGAAAGATATGCACTGCAGTGGGAGTCTAAGCATCTAATGGCTGTAAGCTATGCA
____________________________________________________________
consensus AACTTGGAAAGATATGCACTGCAGTGGGAGTCTAAGCATCTAATGGCTGTAAGCTATGCA
. : . : . : . : . : . :
JMFS021B10- ATTAGGAATTGGCTTACTTCAAGTATTGCTCTTGAATTAATGAAGCGAGGTGCCATGATG
rJMSF046A02+ AGGTGCCATGATG
____________________________________________________________
consensus ATTAGGAATTGGCTTACTTCAAGTATTGCTCTTGAATTAATGAAGCGAGGTGCCATGATG
. : . : . : . : . : . :
JMFS021B10- ACAGTATTGAGCTCTTTCTTAACAGCCTTGGCTT--GGCCAGCAACATTACTTGCTCTTA
rJMSF046A02+ ACAGTATTGAGCTCTTTCTTAACAGCCTTGGCTTNGGCCCAGCAACATTACTTGCTCTTA
rJMSF049O20+ CCAGCAACNNTACTTGCTCTTA
rJMFF001G16+ TA
____________________________________________________________
consensus ACAGTATTGAGCTCTTTCTTAACAGCCTTGGCTTNGGGCCAGCAACATTACTTGCTCTTA
. : . : . : . : . : . :
JMFS021B10- CTCATTTTATTGACAGTGAATG
rJMSF046A02+ CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
rJMSF049O20+ CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
rJMFF001G16+ CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
____________________________________________________________
consensus CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
. : . : . : . : . : . :
rJMSF046A02+ TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
rJMSF049O20+ TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
rJMFF001G16+ TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
____________________________________________________________
consensus TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
. : . : . : . : . : . :
rJMSF046A02+ TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
rJMFF001K22+ TGGCAATA
rJMSF049O20+ TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
rJMFF001G16+ TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
____________________________________________________________
consensus TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
. : . : . : . : . : . :
rJMSF046A02+ ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
rJMFF001K22+ ATNCCGGACTTNTANAAAGAGTNGTTCTTNTTGGGGCGCCAATTAGGATTAGAGACGTGA
rJMSF049O20+ ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
rJMFF001G16+ ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
rJMFF045F11+ GGGGCGCCAATTAGGATNAGAGATGTGA
____________________________________________________________
consensus ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
. : . : . : . : . : . :
rJMSF046A02+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
rJMFF001K22+ ACTNGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAANGTCTATTCTACAAANG
rJMSF049O20+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
rJMFF001G16+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
rJMFF045F11+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
____________________________________________________________
consensus ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
. : . : . : . : . : . :
rJMSF046A02+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
rJMFF001K22+ ATTGGATGCTTGGAATTGTCNNTCGTGCTAGTNTCNTGAGTCAAGGGCTAGCTGGGATTC
rJMSF049O20+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
rJMFF001G16+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
rJMFF045F11+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
____________________________________________________________
consensus ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
. : . : . : . : . : . :
rJMSF046A02+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
rJMFF001K22+ ANCCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGNNCTGATTGATGGCCACT
rJMSF049O20+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
rJMFF001G16+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
rJMFF045F11+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
____________________________________________________________
consensus AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
. : . : . : . : . : . :
rJMSF046A02+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
rJMFF001K22+ CTGCATNNTTGTGGNNTAGCCAAGAGATTCTAGNACTGCTTCAGCTGGACACATATTATC
rJMSF049O20+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
rJMFF001G16+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
rJMFF045F11+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
____________________________________________________________
consensus CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
. : . : . : . : . : . :
rJMSF046A02+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
rJMFF001K22+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTCGATTNTCAGCT
rJMSF049O20+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
rJMFF001G16+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
rJMFF045F11+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
____________________________________________________________
consensus CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
. : . : . : . : . : . :
rJMSF046A02+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMFF001K22+ TACAAGNCAGGGTACAGAATTCNNNACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMSF049O20+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMFF001G16+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMFF045F11+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
____________________________________________________________
consensus TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
. : . : . : . : . : . :
rJMSF046A02+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMFF001K22+ TCTNGCCGTTGTAAATACNCCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMSF049O20+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMFF001G16+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMFF045F11+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
____________________________________________________________
consensus TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
. : . : . : . : . : . :
rJMSF046A02+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
rJMFF001K22+ CNTAGNAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCA
rJMSF049O20+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
rJMFF001G16+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
rJMFF045F11+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
____________________________________________________________
consensus CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
. : . : . : . : . : . :
rJMSF046A02+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAA
rJMSF049O20+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAA
rJMFF001G16+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAAGAT
rJMFF045F11+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAAGATTGATAATTTAATAATGAT
____________________________________________________________
consensus ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAAGATTGATAATTTAATAATGAT
. : . : . : . : . : . :
rJMFF045F11+ GAGGGGGAGTTGTTATCCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus GAGGGGGAGTTGTTATCCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGT