Contig 009800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033E13Sequence611001768 (2)ref|XP_009796933.1|7e-108PREDICTED: SEC1 family transport protein SLY1-like [Nicotiana sylvestris]719009800 (2)ref|XP_004231091.1|3e-78PREDICTED: SEC1 family transport protein SLY1 [Solanum lycopersicum]
JMFF045B20Sequence617001768 (2)ref|XP_009796933.1|7e-110PREDICTED: SEC1 family transport protein SLY1-like [Nicotiana sylvestris]615009800 (2)ref|XP_002312809.1|6e-50SEC1-family transport family protein [Populus trichocarpa] gb|EEE86764.1| SEC1-f

Alignment

This contig is upended


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rJMFF033E13+                                        AAGGAAAAGGGACAAAGGTGGATAAGCTCC
                      ____________________________________________________________
consensus                                           AAGGAAAAGGGACAAAGGTGGATAAGCTCC
 
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rJMFF033E13+          GGTTTGCTATCATCTATCTTATTTCAAGTGAAAACATCCCTCAATCTGAAGTTGAAATGG
                      ____________________________________________________________
consensus             GGTTTGCTATCATCTATCTTATTTCAAGTGAAAACATCCCTCAATCTGAAGTTGAAATGG
 
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rJMFF033E13+          TTGAAGCTGCTCTTAGAGAGTCTGAGGTAGATACAAGTGCATTTCAGTATGTAAAGAAGA
rJMFF045B20+                                                       AGTATGTAAAGAAGA
                      ____________________________________________________________
consensus             TTGAAGCTGCTCTTAGAGAGTCTGAGGTAGATACAAGTGCATTTCAGTATGTAAAGAAGA
 
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rJMFF033E13+          TGAAATCATTAAATGTTTCTTTAGCTTCGGCAAGTTCAGCCAGTAGGGGAAACATTGTTG
rJMFF045B20+          TGAAATCATTAAATGTTTCTTTAGCTTCGGCAAGTTCAGCCAGTAGGGGAAACATTGTTG
                      ____________________________________________________________
consensus             TGAAATCATTAAATGTTTCTTTAGCTTCGGCAAGTTCAGCCAGTAGGGGAAACATTGTTG
 
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rJMFF033E13+          ATTGGGCAGAAAAGCTATATGGGCAGTCAATCGGTGCTGTAACTGCTGGTGTGAAAAACC
rJMFF045B20+          ATTGGGCAGAAAAGCTATATGGGCAGTCAATCGGTGCTGTAACTGCTGGTGTGAAAAACC
                      ____________________________________________________________
consensus             ATTGGGCAGAAAAGCTATATGGGCAGTCAATCGGTGCTGTAACTGCTGGTGTGAAAAACC
 
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rJMFF033E13+          TATTAGCCAGTGATCACCAATTAGCTTTGTCTAGAATTGTTGAAGCACTAATGGAGGGGA
rJMFF045B20+          TATTAGCCAGTGATCACCAATTAGCTTTGTCTAGAATTGTTGAAGCACTAATGGAGGGGA
                      ____________________________________________________________
consensus             TATTAGCCAGTGATCACCAATTAGCTTTGTCTAGAATTGTTGAAGCACTAATGGAGGGGA
 
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rJMFF033E13+          AGCCAAACCCTGAAGTTGATCCTTACCTTATTTTGGATCCCCGTGCTCCCAAGTCAAGCG
rJMFF045B20+          AGCCAAACCCTGAAGTTGATCCTTACCTTATTTTGGATCCCCGTGCTCCCAAGTCAAGCG
                      ____________________________________________________________
consensus             AGCCAAACCCTGAAGTTGATCCTTACCTTATTTTGGATCCCCGTGCTCCCAAGTCAAGCG
 
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rJMFF033E13+          CTGGATCAAGTAGCAGCCATTTGAAAGGGCCATTTAGAGAGCTATTGTGTTTATGATTGG
rJMFF045B20+          CTGGATCAAGTAGCAGCCATTTGAAAGGGCCATTTAGAGAGCTATTGTGTTTATGATTGG
                      ____________________________________________________________
consensus             CTGGATCAAGTAGCAGCCATTTGAAAGGGCCATTTAGAGAGCTATTGTGTTTATGATTGG
 
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rJMFF033E13+          AGGTGGAAATTATGTAGAATATGGTAGCTTGCAAGATCTTGCACATCGGCAGCAGCCACC
rJMFF045B20+          AGGTGGAAATTATGTAGAATATGGTAGCTTGCAAGATCTTGCACATCGGCAGCAGCCACC
                      ____________________________________________________________
consensus             AGGTGGAAATTATGTAGAATATGGTAGCTTGCAAGATCTTGCACATCGGCAGCAGCCACC
 
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rJMFF033E13+          CAAGCATATCATATATGGAACCACAGAAATTCTTACAGGAGGTGAGTTTGTTGAGCAGCT
rJMFF045B20+          CAAGCATATCATATATGGAACCACAGAAATTCTTACAGGAGGTGAGTTTGTTGAGCAGCT
                      ____________________________________________________________
consensus             CAAGCATATCATATATGGAACCACAGAAATTCTTACAGGAGGTGAGTTTGTTGAGCAGCT
 
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rJMFF033E13+          TGCATTGCTGGGTAAGAAGATGGGATTAGGAAGCAGTGGGGTAGCTGCCCCAGCCCAGTA
rJMFF045B20+          TGCATTGCTGGGTAAGAAGATGGGATTAGGAAGCAGTGGGGTAGCTGCCCCAGCCCAGTA
                      ____________________________________________________________
consensus             TGCATTGCTGGGTAAGAAGATGGGATTAGGAAGCAGTGGGGTAGCTGCCCCAGCCCAGTA
 
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rJMFF033E13+          GCATATATGGATCTCAGAAGCAAACCAATTGTGTTGTTCAGTGTGTCTTAGGATGCGCTT
rJMFF045B20+          GCATATATGGATCTCAGAAGCAAACCAATTGTGTTGTTCAGTGTGTCTTAGGATGCGCTT
                      ____________________________________________________________
consensus             GCATATATGGATCTCAGAAGCAAACCAATTGTGTTGTTCAGTGTGTCTTAGGATGCGCTT
 
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rJMFF033E13+          TAAGCAGGACGATGTTATGGACAAAATGA                               
rJMFF045B20+          TAAGCAGGACGATGTTATGGACAAAATGATATATTTGAACCCAGAATGAGGTTTTTGGCT
                      ____________________________________________________________
consensus             TAAGCAGGACGATGTTATGGACAAAATGATATATTTGAACCCAGAATGAGGTTTTTGGCT