Contig 009799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N11Sequence416006077 (2)gb|EYU37635.1|2e-40hypothetical protein MIMGU_mgv1a003216mg [Erythranthe guttata]782009799 (2)gb|ACN78491.1|5e-119putative phosphoglycerate dehydrogenase [Arachis hypogaea]
JMFF045B07Sequence647006077 (2)ref|XP_004236276.1|1e-81PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Solanum ly613009799 (2)ref|XP_009761354.1|3e-74PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Nicotiana

Alignment

This contig is upended


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rJMFF002N11+                                                          TGCAGTCCCAGT
                      ____________________________________________________________
consensus                                                             TGCAGTCCCAGT
 
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rJMFF002N11+          TGGTANCAGGTGGGAGTGGTGTGAAAACTGTGAAAGTAACATATGNTTCTGCCAGAGCTC
                      ____________________________________________________________
consensus             TGGTANCAGGTGGGAGTGGTGTGAAAACTGTGAAAGTAACATATGNTTCTGCCAGAGCTC
 
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rJMFF002N11+          CTGATGATCTTGATACCAGGGTTCTTCGTGCCATGATAACAAAGGGTCTTATTGAGCCCA
                      ____________________________________________________________
consensus             CTGATGATCTTGATACCAGGGTTCTTCGTGCCATGATAACAAAGGGTCTTATTGAGCCCA
 
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rJMFF002N11+          TCTCCAGCGTCTTTGTCAACTTGGTTAATGCAGATTTCACTGCCAAGCAGAGAGGAATCC
                      ____________________________________________________________
consensus             TCTCCAGCGTCTTTGTCAACTTGGTTAATGCAGATTTCACTGCCAAGCAGAGAGGAATCC
 
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rJMFF002N11+          GAATAGCTGAAGAACGAGTTCTTCTTGATGGTTCTCCAGAAAGCCCGCTCGAGTTCATTC
rJMFF045B07+                                                         CTCGAGTTCATTC
                      ____________________________________________________________
consensus             GAATAGCTGAAGAACGAGTTCTTCTTGATGGTTCTCCAGAAAGCCCGCTCGAGTTCATTC
 
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rJMFF002N11+          AGGTTCAGATTGCCAACGTGGAATCCAAATTCGCCAGTGCCATTTCTGACTCCGGGGAGA
rJMFF045B07+          AGGTTCAGATTGCCAACGTGGAATCCAAATTCGCCAGTGCCATTTCTGACTCCGGGGAGA
                      ____________________________________________________________
consensus             AGGTTCAGATTGCCAACGTGGAATCCAAATTCGCCAGTGCCATTTCTGACTCCGGGGAGA
 
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rJMFF002N11+          TCAGGGTGGAGGGTCGTGTCAAAGATGGAGTCCCGCATTTGACAAAGGTGGGTTCCTTTG
rJMFF045B07+          TCAGGGTGGAGGGTCGTGTCAAAGATGGAGTCCCGCATTTGACAAAGGTGGGTTCCTTTG
                      ____________________________________________________________
consensus             TCAGGGTGGAGGGTCGTGTCAAAGATGGAGTCCCGCATTTGACAAAGGTGGGTTCCTTTG
 
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rJMFF002N11+          AAGTAGATGTGAGTTTGGAAGGCAGTATCATCCTCTGCAGACAGGTTGATCAGCCAGGTA
rJMFF045B07+          AAGTAGATGTGAGTTTGGAAGGCAGTATCATCCTCTGCAGACAGGTTGATCAGCCAGGTA
                      ____________________________________________________________
consensus             AAGTAGATGTGAGTTTGGAAGGCAGTATCATCCTCTGCAGACAGGTTGATCAGCCAGGTA
 
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rJMFF002N11+          TGATTGGCAAGGTGGGTAGCATTTTGGGCGAGGAGAATGTGAACGTGAGCTTCATGAGTG
rJMFF045B07+          TGATTGGCAAGGTGGGTAGCATTTTGGGCGAGGAGAATGTGAACGTGAGCTTCATGAGTG
                      ____________________________________________________________
consensus             TGATTGGCAAGGTGGGTAGCATTTTGGGCGAGGAGAATGTGAACGTGAGCTTCATGAGTG
 
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rJMFF002N11+          TCGGGAGAAGTGCTCCAAGGAAGCACGCTTTAATGGCAATCGGAGTTGATGAACAGCCCA
rJMFF045B07+          TCGGGAGAAGTGCTCCAAGGAAGCACGCTTTAATGGCAATCGGAGTTGATGAACAGCCCA
                      ____________________________________________________________
consensus             TCGGGAGAAGTGCTCCAAGGAAGCACGCTTTAATGGCAATCGGAGTTGATGAACAGCCCA
 
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rJMFF002N11+          GCAAAGAATCACTGAAGAGGATTGGCGAAATCCCTGCTGTTGAGGAGTTTGTTTACCTCA
rJMFF045B07+          GCAAAGAATCACTGAAGAGGATTGGCGAAATCCCTGCTGTTGAGGAGTTTGTTTACCTCA
                      ____________________________________________________________
consensus             GCAAAGAATCACTGAAGAGGATTGGCGAAATCCCTGCTGTTGAGGAGTTTGTTTACCTCA
 
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rJMFF002N11+          AGTTATAAGGCCATAAATGCTCTCAAGCTTCCATTAGGTGCCAGTTTTTGTAGTTCTGTT
rJMFF045B07+          AGTTATAAGGCCATAAATGCTCTCAAGCTTCCATTAGGTGCCAGTTTTTGTAGTTCTGTT
                      ____________________________________________________________
consensus             AGTTATAAGGCCATAAATGCTCTCAAGCTTCCATTAGGTGCCAGTTTTTGTAGTTCTGTT
 
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rJMFF002N11+          TTGCTTACAATTAGCTTCTATTTGCGGGGAAAAGAGAGTGATTTGCATGTGCAATTAAGA
rJMFF045B07+          TTGCTTACAATTAGCTTCTATTTGCGGGGAAAAGAGAGTGATTTGCATGTGCAATTAAGA
                      ____________________________________________________________
consensus             TTGCTTACAATTAGCTTCTATTTGCGGGGAAAAGAGAGTGATTTGCATGTGCAATTAAGA
 
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rJMFF002N11+          TATGTACTGTGTATGCACTGTTGAGAGCTGTTCTCATTGTCTCAGTTAAG          
rJMFF045B07+          TATGTACTGTGTATGCCCTGTTGAGAGCTGTTCTCATTGTCTCAGTTAAGTATCTTTGTT
                      ____________________________________________________________
consensus             TATGTACTGTGTATGCCCTGTTGAGAGCTGTTCTCATTGTCTCAGTTAAGTATCTTTGTT
 
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rJMFF045B07+          TCTTGGCTTXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TCTTGGCTTNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGGT