Contig 009795:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C10Sequence379013073 (4)721009795 (3)ref|XP_010067742.1|3e-100PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Eucalyptus grandis] gb|KCW6
JMFF044N03Sequence642013073 (4)ref|XP_004143754.1|8e-52PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus] ref|XP_0041631009795 (3)ref|XP_008245586.1|8e-61PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Prunus mume]
JMSF040G05Sequence683013073 (4)ref|XP_004233165.1|3e-73PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Solanum lycopersicum]892009795 (3)gb|KDP40517.1|2e-132hypothetical protein JCGZ_24516 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040G05+ TATCA
                      ____________________________________________________________
consensus TATCA
 
. : . : . : . : . : . :
rJMSF040G05+ GGACTTTGGGGTGCATGGGGATCTATCCTTACTACAGCAAACTGAAGCATGAATCCCAAT
                      ____________________________________________________________
consensus GGACTTTGGGGTGCATGGGGATCTATCCTTACTACAGCAAACTGAAGCATGAATCCCAAT
 
. : . : . : . : . : . :
rJMSF040G05+ GTGCTTTCAGACCTTATAATTGTCCTTATGCAGGATCAGAGTGCACAGTGATTGGTGACA
                      ____________________________________________________________
consensus GTGCTTTCAGACCTTATAATTGTCCTTATGCAGGATCAGAGTGCACAGTGATTGGTGACA
 
. : . : . : . : . : . :
rJMFF002C10+ TTGAAAGATGATCACAAGGTTGATATGCATAGTGGAAGTA
rJMSF040G05+ TTCCCTTTTTAGTGGCTCATTTGAAAGATGATCACAAGGTTGATATGCATAGTGGAAGTA
                      ____________________________________________________________
consensus TTCCCTTTTTAGTGGCTCATTTGAAAGATGATCACAAGGTTGATATGCATAGTGGAAGTA
 
. : . : . : . : . : . :
rJMFF002C10+ CCTTCAACCATCGCTATGTTAAATCAAATCCACACGAAGTTGAGAATGCTACATGGATGC
rJMSF040G05+ CCTTCAACCATCGCTATGTTAAATCAAATCCACACGAAGTTGAGAATGCTACATGGATGC
                      ____________________________________________________________
consensus CCTTCAACCATCGCTATGTTAAATCAAATCCACACGAAGTTGAGAATGCTACATGGATGC
 
. : . : . : . : . : . :
rJMFF002C10+ TTACAGTTTTCAGTTGCTTTGGGCAGTATTTTTGCTTGCATTTTGAAGCATTTCAGTTGG
rJMSF040G05+ TTACAGTTTTCAGTTGCTTTGGGCAGTATTTTTGCTTGCATTTTGAAGCATTTCAGTTGG
rJMFF044N03+ CATTTTGAAGCATTTCAGTTGG
                      ____________________________________________________________
consensus TTACAGTTTTCAGTTGCTTTGGGCAGTATTTTTGCTTGCATTTTGAAGCATTTCAGTTGG
 
. : . : . : . : . : . :
rJMFF002C10+ GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
rJMSF040G05+ GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
rJMFF044N03+ GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
                      ____________________________________________________________
consensus GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
 
. : . : . : . : . : . :
rJMFF002C10+ ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
rJMSF040G05+ ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
rJMFF044N03+ ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
                      ____________________________________________________________
consensus ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
 
. : . : . : . : . : . :
rJMFF002C10+ CAAGAAGTATAAGGGATAGCCATCGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
rJMSF040G05+ CAAGAAGTATAAGGGATAGCCATCGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
rJMFF044N03+ CAAGAAGTATAAGGGATAGCCATGGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
                      ____________________________________________________________
consensus CAAGAAGTATAAGGGATAGCCATCGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
 
. : . : . : . : . : . :
rJMFF002C10+ AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
rJMSF040G05+ AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
rJMFF044N03+ AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
                      ____________________________________________________________
consensus AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
 
. : . : . : . : . : . :
rJMFF002C10+ CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
rJMSF040G05+ CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
rJMFF044N03+ CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
                      ____________________________________________________________
consensus CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
 
. : . : . : . : . : . :
rJMFF002C10+ CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
rJMSF040G05+ CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
rJMFF044N03+ CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
                      ____________________________________________________________
consensus CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
 
. : . : . : . : . : . :
rJMFF002C10+ TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
rJMSF040G05+ TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
rJMFF044N03+ TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
                      ____________________________________________________________
consensus TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
 
. : . : . : . : . : . :
rJMFF002C10+ TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
rJMSF040G05+ TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
rJMFF044N03+ TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
                      ____________________________________________________________
consensus TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
 
. : . : . : . : . : . :
rJMFF002C10+ CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
rJMSF040G05+ CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
rJMFF044N03+ CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
                      ____________________________________________________________
consensus CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
 
. : . : . : . : . : . :
rJMFF002C10+ CATATGCAGAAAC
rJMSF040G05+ CATATGCAGAAACATGTGAA
rJMFF044N03+ CATATGCAGAAACATGTGAACATGGTGACTATACAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus CATATGCAGAAACATGTGAACATGGTGACTATACAAAAAAAAAAAAAAACTCTCCAGGGT