Contig 009795:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040G05+                                                                 TATCA
                      ____________________________________________________________
consensus                                                                    TATCA
 
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rJMSF040G05+          GGACTTTGGGGTGCATGGGGATCTATCCTTACTACAGCAAACTGAAGCATGAATCCCAAT
                      ____________________________________________________________
consensus             GGACTTTGGGGTGCATGGGGATCTATCCTTACTACAGCAAACTGAAGCATGAATCCCAAT
 
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rJMSF040G05+          GTGCTTTCAGACCTTATAATTGTCCTTATGCAGGATCAGAGTGCACAGTGATTGGTGACA
                      ____________________________________________________________
consensus             GTGCTTTCAGACCTTATAATTGTCCTTATGCAGGATCAGAGTGCACAGTGATTGGTGACA
 
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rJMFF002C10+                              TTGAAAGATGATCACAAGGTTGATATGCATAGTGGAAGTA
rJMSF040G05+          TTCCCTTTTTAGTGGCTCATTTGAAAGATGATCACAAGGTTGATATGCATAGTGGAAGTA
                      ____________________________________________________________
consensus             TTCCCTTTTTAGTGGCTCATTTGAAAGATGATCACAAGGTTGATATGCATAGTGGAAGTA
 
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rJMFF002C10+          CCTTCAACCATCGCTATGTTAAATCAAATCCACACGAAGTTGAGAATGCTACATGGATGC
rJMSF040G05+          CCTTCAACCATCGCTATGTTAAATCAAATCCACACGAAGTTGAGAATGCTACATGGATGC
                      ____________________________________________________________
consensus             CCTTCAACCATCGCTATGTTAAATCAAATCCACACGAAGTTGAGAATGCTACATGGATGC
 
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rJMFF002C10+          TTACAGTTTTCAGTTGCTTTGGGCAGTATTTTTGCTTGCATTTTGAAGCATTTCAGTTGG
rJMSF040G05+          TTACAGTTTTCAGTTGCTTTGGGCAGTATTTTTGCTTGCATTTTGAAGCATTTCAGTTGG
rJMFF044N03+                                                CATTTTGAAGCATTTCAGTTGG
                      ____________________________________________________________
consensus             TTACAGTTTTCAGTTGCTTTGGGCAGTATTTTTGCTTGCATTTTGAAGCATTTCAGTTGG
 
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rJMFF002C10+          GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
rJMSF040G05+          GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
rJMFF044N03+          GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
                      ____________________________________________________________
consensus             GGATGGCACCAGTTTACATAGCATTCTTGCGGTTCATGGGAGATGATAATGAAGCTAAAA
 
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rJMFF002C10+          ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
rJMSF040G05+          ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
rJMFF044N03+          ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
                      ____________________________________________________________
consensus             ACTACAGCTACAGTCTTGAAGTTGGAGGGAATGGGAGGAAGATGATTTGGCAAGGGGTGC
 
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rJMFF002C10+          CAAGAAGTATAAGGGATAGCCATCGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
rJMSF040G05+          CAAGAAGTATAAGGGATAGCCATCGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
rJMFF044N03+          CAAGAAGTATAAGGGATAGCCATGGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
                      ____________________________________________________________
consensus             CAAGAAGTATAAGGGATAGCCATCGAAAAGTTCGTGACAGTTTTGATGGCCTCATCATTC
 
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rJMFF002C10+          AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
rJMSF040G05+          AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
rJMFF044N03+          AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
                      ____________________________________________________________
consensus             AACGCAACATGGCCCTATTTTTCTCGGGTGGTGATCGAAAGGAGTTGAAACTAAGAGTCA
 
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rJMFF002C10+          CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
rJMSF040G05+          CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
rJMFF044N03+          CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
                      ____________________________________________________________
consensus             CTGGTAGGATATGGAAAGAACAGTGACTGGGTTTTCTCTAGACAAATGTTTTCTAGTTTT
 
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rJMFF002C10+          CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
rJMSF040G05+          CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
rJMFF044N03+          CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
                      ____________________________________________________________
consensus             CTACCTTAGGAGACATTTTGTTCAGTTTAGCAGTCCAACCATTTCTCTTGGTCATGTATT
 
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rJMFF002C10+          TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
rJMSF040G05+          TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
rJMFF044N03+          TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
                      ____________________________________________________________
consensus             TTTTGAACATATGAAGCAAGATCTCTTTGCTTGTCCATGAAATACATGAGTGAGAATGCC
 
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rJMFF002C10+          TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
rJMSF040G05+          TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
rJMFF044N03+          TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
                      ____________________________________________________________
consensus             TAGTTATGCACTAAATGTTTTGTATGTCTTGTGCATCAAATATGTTTCAAGAGGTGGATT
 
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rJMFF002C10+          CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
rJMSF040G05+          CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
rJMFF044N03+          CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
                      ____________________________________________________________
consensus             CTAGGCCAGTTCTTTGTCATGTGATCATGAAGTCTTATGTTTACTGTTTGGACAACATAT
 
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rJMFF002C10+          CATATGCAGAAAC                                               
rJMSF040G05+          CATATGCAGAAACATGTGAA                                        
rJMFF044N03+          CATATGCAGAAACATGTGAACATGGTGACTATACAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             CATATGCAGAAACATGTGAACATGGTGACTATACAAAAAAAAAAAAAAACTCTCCAGGGT