Contig 009792:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N10Sequence568006498 (5)gb|EYU30597.1|7e-82hypothetical protein MIMGU_mgv1a006817mg [Erythranthe guttata]764009792 (3)ref|XP_007044899.1|188Actin-like ATPase superfamily protein isoform 2 [Theobroma cacao] ref|XP_0070449
JMFF044J16Sequence648006498 (5)gb|EYU30597.1|6e-102hypothetical protein MIMGU_mgv1a006817mg [Erythranthe guttata]611009792 (3)ref|XP_009780907.1|4e-12PREDICTED: actin-related protein 3-like isoform X2 [Nicotiana sylvestris]
JMSF021C12Sequence651006498 (5)gb|EYU30597.1|1e-51hypothetical protein MIMGU_mgv1a006817mg [Erythranthe guttata]748009792 (3)ref|XP_007044899.1|277Actin-like ATPase superfamily protein isoform 2 [Theobroma cacao] ref|XP_0070449

Alignment

This contig is upended


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rJMSF021C12+                                                               TCCCGAG
                      ____________________________________________________________
consensus                                                                  TCCCGAG
 
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rJMSF021C12+          ATTTACAATAGTGATTTTACTACTCCTCTGCCTGCTATAATAGACAAATGCATTCAGTCT
                      ____________________________________________________________
consensus             ATTTACAATAGTGATTTTACTACTCCTCTGCCTGCTATAATAGACAAATGCATTCAGTCT
 
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rJMSF021C12+          GCACCAATAGACACAAGAAGAGCCCTGTACAAGAATATAGTTTTGTCTGGCGGATCAACC
                      ____________________________________________________________
consensus             GCACCAATAGACACAAGAAGAGCCCTGTACAAGAATATAGTTTTGTCTGGCGGATCAACC
 
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rJMSF021C12+          ATGTTCAAAGATTTCCATAGAAGATTGCAACGAGATTTAAAGAAGATAGTTGATGCTCGT
rJMFF009N10+               CAAAGATTTCCATAGAAGATTGCAACGAGATTTAAAGAAGATAGTTGATGCTCGT
                      ____________________________________________________________
consensus             ATGTTCAAAGATTTCCATAGAAGATTGCAACGAGATTTAAAGAAGATAGTTGATGCTCGT
 
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rJMSF021C12+          GTTCTTGCATCAGATGCTCGGTTGGGTGGAGAAATCAAAGCACAACCGGTGGAAGTAAAT
rJMFF009N10+          GTTCTTGCATCAGATGCTCGGTTGGGTGGAGAAATCAAAGCACAACCGGTGGAAGTAAAT
                      ____________________________________________________________
consensus             GTTCTTGCATCAGATGCTCGGTTGGGTGGAGAAATCAAAGCACAACCGGTGGAAGTAAAT
 
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rJMSF021C12+          GTGGTCAGCCATCCAATACAGAGATATGCAGTTTGGTTCGGAGGATCTGTGCTTGCATCC
rJMFF009N10+          GTGGTCAGCCATCCAATACAGAGATATGCAGTTTGGTTCGGAGGATCTGTGCTTGCATCC
rJMFF044J16+                                                          GTGCTTGCATCC
                      ____________________________________________________________
consensus             GTGGTCAGCCATCCAATACAGAGATATGCAGTTTGGTTCGGAGGATCTGTGCTTGCATCC
 
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rJMSF021C12+          ACTCCTGAATTTTTTGCGGCTTGCCATACGAAAGCAGAGTATGAGGAGTATGGAGCCAGC
rJMFF009N10+          ACTCCTGAATTTTTTGCGGCTTGCCATACGAAAGCAGAGTATGAGGAGTATGGAGCCAGC
rJMFF044J16+          ACTCCTGAATTTTNTGCGGCTTGCCATACGAAAGCAGAGTATGAGGAGTATGGAGCCAGC
                      ____________________________________________________________
consensus             ACTCCTGAATTTTTTGCGGCTTGCCATACGAAAGCAGAGTATGAGGAGTATGGAGCCAGC
 
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rJMSF021C12+          ATATGCCGCACAAACCCTGTATTTAAGGGAATGTATTGATATGGAGGCCATTTGAAATTT
rJMFF009N10+          ATATGCCGCACAAACCCTGTATTTAAGGGAATGTATTGATATGGAGGCCATTTGAAATTT
rJMFF044J16+          ATATGCCGCACAAACCCTGTATNTAAGGGAATGTATTGATATGGAGGCCATTTGAAATTT
                      ____________________________________________________________
consensus             ATATGCCGCACAAACCCTGTATTTAAGGGAATGTATTGATATGGAGGCCATTTGAAATTT
 
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rJMSF021C12+          GAACTTGATGATTATAAAGAAATCTGTTGGTATCATGTTCACTTGAAAAGGTCAACCATT
rJMFF009N10+          GAACTTGATGATTATAAAGAAATCTGTTGGTATCATGTTCACTTGAAAAGGTCAACCATT
rJMFF044J16+          GAACTTGATGATTATAAAGAAATCTGTTGGTATCATGTTCACTTGAAAAGGTCAACCATT
                      ____________________________________________________________
consensus             GAACTTGATGATTATAAAGAAATCTGTTGGTATCATGTTCACTTGAAAAGGTCAACCATT
 
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rJMSF021C12+          CCAAGTTCACATGAGTTAATTTCTTCGAAATCCCAATCCAAAATCACATTGATGTATGCT
rJMFF009N10+          CCAAGTTCACATGAGTTAATTTCTTCGAAATCCCAATCCAAAATCACATTGATGTATGCT
rJMFF044J16+          CCAAGTTCACATGAGTTAATTTCTTCGAAATCCCAATCCAAAATCACATTGATGTATGCT
                      ____________________________________________________________
consensus             CCAAGTTCACATGAGTTAATTTCTTCGAAATCCCAATCCAAAATCACATTGATGTATGCT
 
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rJMSF021C12+          TCCAGCTGGCTAGAGGCTTGTATAGATAGACTTGTTGATTCTTGCTTTATAGGAAACCTC
rJMFF009N10+          TCCAGCTGGCTAGAGGCTTGTATAGATAGACTTGTTGATTCTTGCTTTATAGGAAACCTC
rJMFF044J16+          TCCAGCTGGCTAGAGGCTTGTATAGATAGACTTGTTGATTCTTGCTTTATAGGAAACCTC
                      ____________________________________________________________
consensus             TCCAGCTGGCTAGAGGCTTGTATAGATAGACTTGTTGATTCTTGCTTTATAGGAAACCTC
 
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rJMSF021C12+          TACCTTCATGCAGGAACCCTTTGGTCAATGCTTTTCCAGAAAAGTTGGTTTGATTTTGGA
rJMFF009N10+          TACCTTCATGCAGGAACCCTTTGGTCAATGCTTTTCCAGAAAAGTTGGTTTGATTTTGGA
rJMFF044J16+          TACCTTCATGCAGGAACCCTTTGGTCAATGCTTTTCCAGAAAAGTTGGTTTGATTTTGGA
                      ____________________________________________________________
consensus             TACCTTCATGCAGGAACCCTTTGGTCAATGCTTTTCCAGAAAAGTTGGTTTGATTTTGGA
 
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rJMSF021C12+          AGCTACTGAGCTGAATGTGATTATCTCAGCGTTCGCCTTTTAGCTTCATAAAGTTCTTAC
rJMFF009N10+          AGCTACTGAGCTGAATGTGATTATCTCAGCGTTCGCCTTTTAGCTTCATAAAGTTCTTA-
rJMFF044J16+          AGCTACTGAGCTGAATGTGATTATCTCAGCGTTCGCCTTTTAGCTTCATAAAGTTCTTA-
                      ____________________________________________________________
consensus             AGCTACTGAGCTGAATGTGATTATCTCAGCGTTCGCCTTTTAGCTTCATAAAGTTCTTA-
 
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rJMSF021C12+          CAGTATAACTCAGATAATTAT                                       
rJMFF009N10+          CAGTATAACTCAGATAATTATGTTATTTCATTCGTTGAAAGATTGATATTTGATTAGAGG
rJMFF044J16+          CAGTATAACTCAGATAATTATGTTATTTCATTCGTTGAAAGATTGATATTTGATTAGAGG
                      ____________________________________________________________
consensus             CAGTATAACTCAGATAATTATGTTATTTCATTCGTTGAAAGATTGATATTTGATTAGAGG
 
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rJMFF009N10+          TTTAGAATCATGGTTTTGGTTGCAATTTGTCCAAAAGTCCGTCCTTGTATGTACTGTTCG
rJMFF044J16+          TTTAGAATCATGGTTTTGGTTGCAATTTGTCCAAAAGTCCGTCCTTGTATGTACTGTTCG
                      ____________________________________________________________
consensus             TTTAGAATCATGGTTTTGGTTGCAATTTGTCCAAAAGTCCGTCCTTGTATGTACTGTTCG
 
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rJMFF009N10+          TTAGAAAAATTCTTGTCATTTTCCTGGGATAGCTAATGTATACAAA              
rJMFF044J16+          TTAGAAAAATTCTTGTCATTTTCCTGGGATAGCTAATGTATACAAATGGATTTTTGTATC
                      ____________________________________________________________
consensus             TTAGAAAAATTCTTGTCATTTTCCTGGGATAGCTAATGTATACAAATGGATTTTTGTATC