Contig 009785:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043K11Sequence630001762 (2)ref|XP_009596831.1|4e-76PREDICTED: YTH domain-containing family protein 1-like [Nicotiana tomentosiform408009785 (2)
JMSF047L06Sequence683024282ref|XP_011089706.1|3e-56PREDICTED: YTH domain-containing family protein 1-like [Sesamum indicum]262009785 (2)

Alignment

This contig is upended


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rJMFF043K11+                      AACAATGGTAAAGCTAGCAACAATGCTGTGATGATTTCATATACTTTA
                      ____________________________________________________________
consensus                         AACAATGGTAAAGCTAGCAACAATGCTGTGATGATTTCATATACTTTA
 
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rJMSF047L06+                                         TTTTTTTTTTTNNGCCTCCTGATGGGTTA
rJMFF043K11+          AGGACCAGAAGAGATATGAAACCCCATGCTTTTTTTTTTTTTTTGCCTCCTGATGGGTTA
                      ____________________________________________________________
consensus             AGGACCAGAAGAGATATGAAACCCCATGCTTTTTTTTTTTTTTTGCCTCCTGATGGGTTA
 
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rJMSF047L06+          GTTTCTTTAGTGGCCTAGCTTCTAACATTTTCACCATCCATATGGTTTTAGTTTACTACT
rJMFF043K11+          GTTTTTTTAGTGGCCTAGCTTTTAACATTTTCACCATCCATATGGTTTTAGTTTACTACT
                      ____________________________________________________________
consensus             GTTTTTTTAGTGGCCTAGCTTTTAACATTTTCACCATCCATATGGTTTTAGTTTACTACT
 
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rJMSF047L06+          TTTTGTTTTGTTGGGGAGATCTCATTTCTTTTCCTTTTGTTNTTTGTTTTTTATAGTTTG
rJMFF043K11+          TTTTGTTTTGTTGGGGAGATCTCATTTCTTTTCCTTTTGTTTTTTGTTTTTTATAGTTTG
                      ____________________________________________________________
consensus             TTTTGTTTTGTTGGGGAGATCTCATTTCTTTTCCTTTTGTTTTTTGTTTTTTATAGTTTG
 
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rJMSF047L06+          GTTTNNGAGTTTTCTAAGGNTTGGCAACAATCCTATCNTGTAATT               
rJMFF043K11+          GTTTTTGAGTTTTTTAAGGTTTGGCAACAATCCTATCTTGTAATTTTAGATTTTAGATGG
                      ____________________________________________________________
consensus             GTTTTTGAGTTTTTTAAGGTTTGGCAACAATCCTATCTTGTAATTTTAGATTTTAGATGG
 
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rJMFF043K11+          ACTCTGTTCGGGTTTGGAGGGTGGTTACTTGTGTACTTTTGATGAAGGAGATATATACTT
                      ____________________________________________________________
consensus             ACTCTGTTCGGGTTTGGAGGGTGGTTACTTGTGTACTTTTGATGAAGGAGATATATACTT
 
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rJMFF043K11+          AAATTCAGTTAATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus             AAATTCAGTTAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAA