Contig 009781:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I01Sequence613000764 (8)ref|XP_009802944.1|4e-25PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294656009781 (5)gb|KDO55686.1|8e-28hypothetical protein CISIN_1g004592mg [Citrus sinensis] gb|KDO55687.1| hypotheti
JMFF043H02Sequence639000764 (8)ref|XP_009802944.1|6e-29PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294599009781 (5)ref|XP_006338672.1|3e-12PREDICTED: transcription factor GTE8-like isoform X1 [Solanum tuberosum] ref|XP
JMFS017H09Sequence627009781 (5)emb|CBI40077.3|3e-35unnamed protein product [Vitis vinifera]
JMSF025I02Sequence704000764 (8)ref|XP_009802944.1|2e-24PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294740009781 (5)ref|XP_006447148.1|3e-26hypothetical protein CICLE_v10014390mg [Citrus clementina] ref|XP_006447149.1| h
JMSF026E24Sequence622000764 (8)ref|XP_009802944.1|4e-27PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294716009781 (5)gb|KDO55686.1|8e-25hypothetical protein CISIN_1g004592mg [Citrus sinensis] gb|KDO55687.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS017H09- CAGGATCAGGCTTGTCTTGCAGCAAGCATAATAGAT
                      ____________________________________________________________
consensus CAGGATCAGGCTTGTCTTGCAGCAAGCATAATAGAT
 
. : . : . : . : . : . :
JMFS017H09- AGAAAAGGTGTTAATGATTTGGCTGATGGTGATGGTGTGATCAGTTTGTTTGACCAGGTT
                      ____________________________________________________________
consensus AGAAAAGGTGTTAATGATTTGGCTGATGGTGATGGTGTGATCAGTTTGTTTGACCAGGTT
 
. : . : . : . : . : . :
JMFS017H09- GAACAAAGCTCCCAACAGAAGCCAAATTCTTCTGAATTTGATGGGCAACAAGATGGGGAG
                      ____________________________________________________________
consensus GAACAAAGCTCCCAACAGAAGCCAAATTCTTCTGAATTTGATGGGCAACAAGATGGGGAG
 
. : . : . : . : . : . :
JMFS017H09- ATCTCTCAGAATGATAGGCCAGCATCTCCTGAGAAGCTCTATAGAGCTGCTTTATTGAAG
                      ____________________________________________________________
consensus ATCTCTCAGAATGATAGGCCAGCATCTCCTGAGAAGCTCTATAGAGCTGCTTTATTGAAG
 
. : . : . : . : . : . :
JMFS017H09- AACAGATTTGCAGACACAATTTTAAAGGCTCGAGAAAAGACACTTGGTCAGGGTGAGAAA
                      ____________________________________________________________
consensus AACAGATTTGCAGACACAATTTTAAAGGCTCGAGAAAAGACACTTGGTCAGGGTGAGAAA
 
. : . : . : . : . : . :
JMFS017H09- GGAGATCCTGACCAACTCCGCCGTGAAAGGGAAGTGCTTGAGATGCAGAGGAAGAAAGAG
                      ____________________________________________________________
consensus GGAGATCCTGACCAACTCCGCCGTGAAAGGGAAGTGCTTGAGATGCAGAGGAAGAAAGAG
 
. : . : . : . : . : . :
JMFS017H09- AAAGCTAGGCTACAGGCAGAAGCCAAAGCTGCTGAAGAGGCTCGAAAACGAGCAGAAGAG
rJMSF025I02+ GGCTACAGGCAGAAGCCAAAGCTGCTGAAGAGGCTCGAAAACGAGCAGAAGAG
rJMSF026E24+ TCGAAAACGAGCAGAAGAG
                      ____________________________________________________________
consensus AAAGCTAGGCTACAGGCAGAAGCCAAAGCTGCTGAAGAGGCTCGAAAACGAGCAGAAGAG
 
. : . : . : . : . : . :
JMFS017H09- GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
rJMSF025I02+ GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
rJMSF026E24+ GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
rJMFF015I01+ AAAGAGAAGCCGCAAGGCAAGCA
                      ____________________________________________________________
consensus GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
 
. : . : . : . : . : . :
JMFS017H09- CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTT
rJMSF025I02+ CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
rJMSF026E24+ CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
rJMFF015I01+ CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
                      ____________________________________________________________
consensus CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
 
. : . : . : . : . : . :
rJMSF025I02+ GAGATGTTGAGGGTAGGCCCTACAGAACAACATAGCCCTCTAAATGAGTCCAGCCCACAA
rJMSF026E24+ GAGATGTTGAGGGTAGGCCCTACAGAACAACATAGCCCTCTAAATGAGTCCAGCCCACAA
rJMFF015I01+ GAGATGTTGAGGGTAGGCCGTACAGAACAACATAGCTNTCTAAATGAGTNCAGCCCACAA
rJMFF043H02+ AGATGTTGAGGGTAGGCCCTACAGAACAACATAGCTCTCTAAATGAGTCCAGCCCACAA
                      ____________________________________________________________
consensus GAGATGTTGAGGGTAGGCCCTACAGAACAACATAGCTCTCTAAATGAGTCCAGCCCACAA
 
. : . : . : . : . : . :
rJMSF025I02+ CATTCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
rJMSF026E24+ CATTCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
rJMFF015I01+ CATCCGTTGGATGNTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
rJMFF043H02+ CATCCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
                      ____________________________________________________________
consensus CATTCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
 
. : . : . : . : . : . :
rJMSF025I02+ GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
rJMSF026E24+ GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
rJMFF015I01+ GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
rJMFF043H02+ GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
                      ____________________________________________________________
consensus GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
 
. : . : . : . : . : . :
rJMSF025I02+ CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
rJMSF026E24+ CCAAAAGACGCGAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
rJMFF015I01+ CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTNGTTTAGTAT
rJMFF043H02+ CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
                      ____________________________________________________________
consensus CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
 
. : . : . : . : . : . :
rJMSF025I02+ GCCCAAGTATTTTCACCTCTACGGACGAAACATCCCCTCTCCGACCTTCACCAGAAAATG
rJMSF026E24+ GCCCAAGTATTTTCACCTCTACGGACGAAACATCCCCTCTCCGACCTTCACCAGAAAATG
rJMFF015I01+ GCCCAAGTATTTTCACCTNTANGGACGCAACATCCCNTCTCTGACCTTCACCAGAAAATG
rJMFF043H02+ GCCCAAGTATTTTCACCTCTACGGACGCAACATCCCCTCTCCGACCTTCACCAGAAAATG
                      ____________________________________________________________
consensus GCCCAAGTATTTTCACCTCTACGGACGCAACATCCCCTCTCCGACCTTCACCAGAAAATG
 
. : . : . : . : . : . :
rJMSF025I02+ CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
rJMSF026E24+ CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
rJMFF015I01+ CCCCCCGAGTACAAAGCACTNGAACNTANCCCAGAGGTAATCATCATCACCATGAACCCA
rJMFF043H02+ CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
                      ____________________________________________________________
consensus CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
 
. : . : . : . : . : . :
rJMSF025I02+ ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
rJMSF026E24+ ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
rJMFF015I01+ ACCATGTTGTAATNNTATATCAAGTGAAAAGGTGTTGGTAAAACCCATCCTNTTTTGAAA
rJMFF043H02+ ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
                      ____________________________________________________________
consensus ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
 
. : . : . : . : . : . :
rJMSF025I02+ TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
rJMSF026E24+ TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
rJMFF015I01+ TATGATGGGAATTGCAGGGCATTGAAATNTGNAAATAATGTGTACTTGAGATCATTNAAC
rJMFF043H02+ TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
                      ____________________________________________________________
consensus TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
 
. : . : . : . : . : . :
rJMSF025I02+ CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
rJMSF026E24+ CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
rJMFF015I01+ CATTNTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGNTGGT
rJMFF043H02+ CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
                      ____________________________________________________________
consensus CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
 
. : . : . : . : . : . :
rJMSF025I02+ TCATCAACATTTAGCAAC
rJMSF026E24+ TCATCAACATTTAGCAAC
rJMFF015I01+ TCATCAACATTNAGCAAC
rJMFF043H02+ TCATCAACATTTAGCAACTGTAAAAGCCACAGGATTCTATATTATTTTTCCTTTTTAAAG
                      ____________________________________________________________
consensus TCATCAACATTTAGCAACTGTAAAAGCCACAGGATTCTATATTATTTTTCCTTTTTAAAG