Contig 009781:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I01Sequence613000764 (8)ref|XP_009802944.1|4e-25PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294656009781 (5)gb|KDO55686.1|8e-28hypothetical protein CISIN_1g004592mg [Citrus sinensis] gb|KDO55687.1| hypotheti
JMFF043H02Sequence639000764 (8)ref|XP_009802944.1|6e-29PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294599009781 (5)ref|XP_006338672.1|3e-12PREDICTED: transcription factor GTE8-like isoform X1 [Solanum tuberosum] ref|XP
JMFS017H09Sequence627009781 (5)emb|CBI40077.3|3e-35unnamed protein product [Vitis vinifera]
JMSF025I02Sequence704000764 (8)ref|XP_009802944.1|2e-24PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294740009781 (5)ref|XP_006447148.1|3e-26hypothetical protein CICLE_v10014390mg [Citrus clementina] ref|XP_006447149.1| h
JMSF026E24Sequence622000764 (8)ref|XP_009802944.1|4e-27PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294716009781 (5)gb|KDO55686.1|8e-25hypothetical protein CISIN_1g004592mg [Citrus sinensis] gb|KDO55687.1| hypotheti

Alignment

This contig is upended


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JMFS017H09-                                   CAGGATCAGGCTTGTCTTGCAGCAAGCATAATAGAT
                      ____________________________________________________________
consensus                                     CAGGATCAGGCTTGTCTTGCAGCAAGCATAATAGAT
 
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JMFS017H09-           AGAAAAGGTGTTAATGATTTGGCTGATGGTGATGGTGTGATCAGTTTGTTTGACCAGGTT
                      ____________________________________________________________
consensus             AGAAAAGGTGTTAATGATTTGGCTGATGGTGATGGTGTGATCAGTTTGTTTGACCAGGTT
 
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JMFS017H09-           GAACAAAGCTCCCAACAGAAGCCAAATTCTTCTGAATTTGATGGGCAACAAGATGGGGAG
                      ____________________________________________________________
consensus             GAACAAAGCTCCCAACAGAAGCCAAATTCTTCTGAATTTGATGGGCAACAAGATGGGGAG
 
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JMFS017H09-           ATCTCTCAGAATGATAGGCCAGCATCTCCTGAGAAGCTCTATAGAGCTGCTTTATTGAAG
                      ____________________________________________________________
consensus             ATCTCTCAGAATGATAGGCCAGCATCTCCTGAGAAGCTCTATAGAGCTGCTTTATTGAAG
 
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JMFS017H09-           AACAGATTTGCAGACACAATTTTAAAGGCTCGAGAAAAGACACTTGGTCAGGGTGAGAAA
                      ____________________________________________________________
consensus             AACAGATTTGCAGACACAATTTTAAAGGCTCGAGAAAAGACACTTGGTCAGGGTGAGAAA
 
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JMFS017H09-           GGAGATCCTGACCAACTCCGCCGTGAAAGGGAAGTGCTTGAGATGCAGAGGAAGAAAGAG
                      ____________________________________________________________
consensus             GGAGATCCTGACCAACTCCGCCGTGAAAGGGAAGTGCTTGAGATGCAGAGGAAGAAAGAG
 
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JMFS017H09-           AAAGCTAGGCTACAGGCAGAAGCCAAAGCTGCTGAAGAGGCTCGAAAACGAGCAGAAGAG
rJMSF025I02+                 GGCTACAGGCAGAAGCCAAAGCTGCTGAAGAGGCTCGAAAACGAGCAGAAGAG
rJMSF026E24+                                                   TCGAAAACGAGCAGAAGAG
                      ____________________________________________________________
consensus             AAAGCTAGGCTACAGGCAGAAGCCAAAGCTGCTGAAGAGGCTCGAAAACGAGCAGAAGAG
 
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JMFS017H09-           GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
rJMSF025I02+          GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
rJMSF026E24+          GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
rJMFF015I01+                                               AAAGAGAAGCCGCAAGGCAAGCA
                      ____________________________________________________________
consensus             GAGGCTGCAGCTGAGGCCAAGAGAAAAAGGGAATTTGAAAGAGAAGCCGCAAGGCAAGCA
 
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JMFS017H09-           CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTT 
rJMSF025I02+          CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
rJMSF026E24+          CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
rJMFF015I01+          CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
                      ____________________________________________________________
consensus             CTGCTCAAGATGGAACAGACCGTTGAAATCAATGAGAATTCCCGGTTCCTTGAGGATTTG
 
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rJMSF025I02+          GAGATGTTGAGGGTAGGCCCTACAGAACAACATAGCCCTCTAAATGAGTCCAGCCCACAA
rJMSF026E24+          GAGATGTTGAGGGTAGGCCCTACAGAACAACATAGCCCTCTAAATGAGTCCAGCCCACAA
rJMFF015I01+          GAGATGTTGAGGGTAGGCCGTACAGAACAACATAGCTNTCTAAATGAGTNCAGCCCACAA
rJMFF043H02+           AGATGTTGAGGGTAGGCCCTACAGAACAACATAGCTCTCTAAATGAGTCCAGCCCACAA
                      ____________________________________________________________
consensus             GAGATGTTGAGGGTAGGCCCTACAGAACAACATAGCTCTCTAAATGAGTCCAGCCCACAA
 
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rJMSF025I02+          CATTCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
rJMSF026E24+          CATTCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
rJMFF015I01+          CATCCGTTGGATGNTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
rJMFF043H02+          CATCCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
                      ____________________________________________________________
consensus             CATTCGCTGGATGCTTTAGGCAGTTTCAAATTTACAGGCAGTAATCCTTTAGAACAACTC
 
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rJMSF025I02+          GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
rJMSF026E24+          GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
rJMFF015I01+          GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
rJMFF043H02+          GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
                      ____________________________________________________________
consensus             GGTCTGTATATGAAAGAAGATGATGATTTTGAAGAATGCGAGCCGCCACCATCCAGTGTT
 
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rJMSF025I02+          CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
rJMSF026E24+          CCAAAAGACGCGAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
rJMFF015I01+          CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTNGTTTAGTAT
rJMFF043H02+          CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
                      ____________________________________________________________
consensus             CCAAAAGACGCAAAGGATGTAGAGGAAGGAGAAATTGATTAGGGTTGGTTCGTCTAGTAT
 
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rJMSF025I02+          GCCCAAGTATTTTCACCTCTACGGACGAAACATCCCCTCTCCGACCTTCACCAGAAAATG
rJMSF026E24+          GCCCAAGTATTTTCACCTCTACGGACGAAACATCCCCTCTCCGACCTTCACCAGAAAATG
rJMFF015I01+          GCCCAAGTATTTTCACCTNTANGGACGCAACATCCCNTCTCTGACCTTCACCAGAAAATG
rJMFF043H02+          GCCCAAGTATTTTCACCTCTACGGACGCAACATCCCCTCTCCGACCTTCACCAGAAAATG
                      ____________________________________________________________
consensus             GCCCAAGTATTTTCACCTCTACGGACGCAACATCCCCTCTCCGACCTTCACCAGAAAATG
 
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rJMSF025I02+          CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
rJMSF026E24+          CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
rJMFF015I01+          CCCCCCGAGTACAAAGCACTNGAACNTANCCCAGAGGTAATCATCATCACCATGAACCCA
rJMFF043H02+          CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
                      ____________________________________________________________
consensus             CCCCCCGAGTACAAAGCACTTGAACCTAACCCAGAGGTAATCATCATCACCATGAACCCA
 
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rJMSF025I02+          ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
rJMSF026E24+          ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
rJMFF015I01+          ACCATGTTGTAATNNTATATCAAGTGAAAAGGTGTTGGTAAAACCCATCCTNTTTTGAAA
rJMFF043H02+          ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
                      ____________________________________________________________
consensus             ACCATGTTGTAATACTATATCAAGTGAAAAGGTGTTGCTAAAACCCATCCTCTTTTGAAA
 
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rJMSF025I02+          TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
rJMSF026E24+          TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
rJMFF015I01+          TATGATGGGAATTGCAGGGCATTGAAATNTGNAAATAATGTGTACTTGAGATCATTNAAC
rJMFF043H02+          TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
                      ____________________________________________________________
consensus             TATGATGGGAATTGCAGGGCATTGAAATCTGAAAATAATGTGTACTTGAGATCATTAAAC
 
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rJMSF025I02+          CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
rJMSF026E24+          CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
rJMFF015I01+          CATTNTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGNTGGT
rJMFF043H02+          CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
                      ____________________________________________________________
consensus             CATTGTGTTTGGTATGTGGTATGGTTGTAGTAGTGTAGGATGTAATTTGAGCATGTTGGT
 
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rJMSF025I02+          TCATCAACATTTAGCAAC                                          
rJMSF026E24+          TCATCAACATTTAGCAAC                                          
rJMFF015I01+          TCATCAACATTNAGCAAC                                          
rJMFF043H02+          TCATCAACATTTAGCAACTGTAAAAGCCACAGGATTCTATATTATTTTTCCTTTTTAAAG
                      ____________________________________________________________
consensus             TCATCAACATTTAGCAACTGTAAAAGCCACAGGATTCTATATTATTTTTCCTTTTTAAAG