Contig 009779:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043E03Sequence627000703 (8)ref|XP_006367701.1|3e-112PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]626009779 (10)ref|XP_009776740.1|5e-53PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana sylves
JMFF047L14Sequence638000703 (8)ref|XP_006367701.1|3e-100PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]521009779 (10)ref|XP_009776740.1|4e-51PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana sylves
JMFS157A07Sequence604009779 (10)ref|XP_009593931.1|2e-105PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment
JMSF009G06Sequence396000703 (8)ref|XP_006367701.1|1e-62PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]745009779 (10)ref|XP_009593931.1|1e-112PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment
JMSF010M13Sequence340000703 (8)ref|XP_006367701.1|9e-46PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]731009779 (10)ref|XP_009593931.1|2e-103PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment
JMSF013C24Sequence200000703 (8)ref|XP_004252371.1|2e-15PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Solanum lycopersicum]728009779 (10)ref|XP_009593931.1|1e-120PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment
JMSF017K04Sequence563000703 (8)ref|XP_006367701.1|5e-85PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]755009779 (10)ref|XP_009593931.1|8e-86PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment
JMSF032J02Sequence597009779 (10)ref|XP_011072477.1|5e-77PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Sesamum indicum]
JMSF032K03Sequence701000703 (8)ref|XP_006367701.1|5e-123PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]680009779 (10)ref|XP_009593931.1|1e-111PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment
JMSF034F11Sequence683000703 (8)ref|XP_006367701.1|1e-123PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Solanum tuberosum]718009779 (10)ref|XP_009593931.1|3e-82PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 isoform X2 [Nicotiana toment

Alignment

This contig is upended


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JMFS157A07-                     AAGCTTCTCCTTCTTTAGGTCGCAGTGCATTCCCTTAAATGCCACATTTC
                      ____________________________________________________________
consensus                       AAGCTTCTCCTTCTTTAGGTCGCAGTGCATTCCCTTAAATGCCACATTTC
 
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JMFS157A07-           ACAGGAGGTGAACCATTTGCACGAGGGTTTAAAACGTGGCTTGAAATCAGAACTGGAGAA
rJMSF013C24+                                               GGCTTGAAATCAGAACTGGAGAA
                      ____________________________________________________________
consensus             ACAGGAGGTGAACCATTTGCACGAGGGTTTAAAACGTGGCTTGAAATCAGAACTGGAGAA
 
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JMFS157A07-           AGCTTCTCCTTCTTTAGGTCGCAGTGCAATTTACCTAAAAGATTCTCGAATTAATGGTTT
rJMSF013C24+          AGCTTCTCCTTCTTTAGGTCGCAGTGCAATTTACCTAAAAGATTCTCGAATTAATGGTTT
rJMSF017K04+                    TCTTTAGGTCGCAGTGCAATTTACCTAAAAGATTCTCGAATTAATGGTTT
rJMSF032K03+                         AGGTCGCAGTGCAATTTACCTAAAAGATTCTCGAATTAATGGTTT
rJMSF009G06+                    TCTTTAGGTCGCAGTGCAATTTACCTAAAAGATTCTCGAATTAATGGTTT
rJMSF034F11+                                                         GAATTAATGGTTT
rJMSF010M13+                                                           ATTAATGGTTT
                      ____________________________________________________________
consensus             AGCTTCTCCTTCTTTAGGTCGCAGTGCAATTTACCTAAAAGATTCTCGAATTAATGGTTT
 
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JMFS157A07-           GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
rJMSF013C24+          GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
rJMSF017K04+          GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
rJMSF032K03+          GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
rJMSF032J02+                                                                TCAAAA
rJMSF009G06+          GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
rJMSF034F11+          GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
rJMSF010M13+          GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
                      ____________________________________________________________
consensus             GCCAAGATACTTGACCATTCAGTTTGTTCGATTTTTCTGGAAAAGGGAATCAAATCAAAA
 
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JMFS157A07-           GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
rJMSF013C24+          GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
rJMSF017K04+          GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
rJMSF032K03+          GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
rJMSF032J02+          GGCAAAGATTTTGNGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGANTTGTGNTC
rJMSF009G06+          GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
rJMSF034F11+          GGCAAAGA--TTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
rJMSF010M13+          GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
                      ____________________________________________________________
consensus             GGCAAAGATTTTGCGGAAAGTAGATTATCCATTGGAATTGGATGTCTTTGACTTGTGTTC
 
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JMFS157A07-           AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
rJMSF013C24+          AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
rJMSF017K04+          AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
rJMSF032K03+          AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
rJMSF032J02+          AGATGATCTGCNCAAGAGATTGGAAGGTCCTCNCAAGGCTNTAAGAGATGAGGAGGGTAA
rJMSF009G06+          AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
rJMSF034F11+          AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
rJMSF010M13+          AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
                      ____________________________________________________________
consensus             AGATGATCTGCGCAAGAGATTGGAAGGTCCTCGCAAGGCTTTAAGAGATGAGGAGGGTAA
 
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JMFS157A07-           GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF013C24+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF017K04+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF032K03+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF032J02+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF009G06+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF034F11+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMSF010M13+          GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
rJMFF043E03+                                            AGCTCGAAAGACAATGATGTCAAGAT
                      ____________________________________________________________
consensus             GAAACTTGGTTTACAAGCTAGTGGGAAGAGTTCTAGCTCGAAAGACAATGATGTCAAGAT
 
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JMFS157A07-           GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF013C24+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF017K04+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF032K03+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF032J02+          GACTGATGCAGNGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF009G06+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF034F11+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMSF010M13+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
rJMFF047L14+                                                 CTCAAAACCAGCACCCCAAGA
rJMFF043E03+          GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
                      ____________________________________________________________
consensus             GACTGATGCAGTGGAATCATCCAGTGGAAGTGGAGAGTCCTCAAAACCAGCACCCCAAGA
 
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JMFS157A07-           AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF013C24+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF017K04+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF032K03+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF032J02+          AGGTGTTTTNCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF009G06+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF034F11+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMSF010M13+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMFF047L14+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
rJMFF043E03+          AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
                      ____________________________________________________________
consensus             AGGTGTTTTGCCCGAGAAGGAACAACACTTGACCGGCATATATGATTTAGTTGCTGTGCT
 
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JMFS157A07-           GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMSF013C24+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMSF017K04+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCA--AAAA
rJMSF032K03+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMSF032J02+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCANTACGTTGCCTGGGTCAAGCAAGAAAA
rJMSF009G06+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMSF034F11+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMSF010M13+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMFF047L14+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
rJMFF043E03+          GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
                      ____________________________________________________________
consensus             GACTCACAAGGGAAGAAGTGCAGACTCAGGGCACTACGTTGCCTGGGTCAAGCAAGAAAA
 
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JMFS157A07-           TGGAAAATGGATTC                                              
rJMSF013C24+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMSF017K04+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMSF032K03+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMSF032J02+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMSF009G06+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMSF034F11+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMSF010M13+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMFF047L14+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
rJMFF043E03+          TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
                      ____________________________________________________________
consensus             TGGAAAATGGATTCAATTCGACGATGACAATCCAATACCACAACGCGAGGAAGACATCCC
 
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rJMSF013C24+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMSF017K04+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMSF032K03+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMSF032J02+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMSF009G06+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMSF034F11+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMSF010M13+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMFF047L14+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
rJMFF043E03+          TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
                      ____________________________________________________________
consensus             TAAACTTTCTGGTGGAGGTGACTGGCACATGGCATACATTTGCATGTACAAGGCTCGCGT
 
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rJMSF013C24+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMSF017K04+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMSF032K03+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMSF032J02+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMSF009G06+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMSF034F11+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMSF010M13+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMFF047L14+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
rJMFF043E03+          CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
                      ____________________________________________________________
consensus             CACCCCCATGTAATATTTTCTCTTGGCATGTTTGGTCATTTGTTGTGTTTACACTACACA
 
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rJMSF013C24+          TTGAGATTGGTCTCTCTT                                          
rJMSF017K04+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
rJMSF032K03+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGC                         
rJMSF032J02+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGG         
rJMSF009G06+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
rJMSF034F11+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
rJMSF010M13+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
rJMFF047L14+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
rJMFF043E03+          TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
                      ____________________________________________________________
consensus             TTGAGATTGGTCTCTCTTTGAATCTGTTGAGCCGCGTGCTACTAGTTTCGGACTAAATTC
 
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rJMSF017K04+          TTAACTTTCGCGATATTGCCATTTGTTA                                
rJMSF009G06+          TTAACTTTCGCGATATTGCCATTTGTTACTCTGTT                         
rJMSF034F11+          TTAACTTTCGCGATATTGCCATTTGTTACTCTGTTTACTAGCTTTTA             
rJMSF010M13+          TTAACTTTCGCGATATTGCCATTTGTTACTCTGTTTACTAGCTTTTATGATTCTGTCAAA
rJMFF047L14+          TTAACTTTCGCGATATTGCCATTTGTTACTCTGTTTACTAGCTTTTATGATTCTGTCAAA
rJMFF043E03+          TTAACTTTCGCGATATTGCCATTTGTTACTCTGTTTACTAGCTTTTATGATTCTGTCAAA
                      ____________________________________________________________
consensus             TTAACTTTCGCGATATTGCCATTTGTTACTCTGTTTACTAGCTTTTATGATTCTGTCAAA
 
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rJMFF047L14+          TGTATGGGAAACTATTTATAGACATCATTCACATATTACAACTTTTACGAGTTCCACTTT
rJMFF043E03+          TGTATGGGAAACTATTTATAGACATCATTCACATATTACAACTTTTACGAGTTCCACTTT
                      ____________________________________________________________
consensus             TGTATGGGAAACTATTTATAGACATCATTCACATATTACAACTTTTACGAGTTCCACTTT
 
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rJMFF047L14+          GGCAATGAATGCCATCTACG                                        
rJMFF043E03+          GGCAATGAATGCCATCTACGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             GGCAATGAATGCCATCTACGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG