| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026B02 | Sequence | 594 | 009773 (5) | ref|XP_011071372.1| | 3e-90 | PREDICTED: peroxidase 40 [Sesamum indicum] | 767 | 009773 (5) | ref|XP_009619919.1| | 7e-110 | PREDICTED: peroxidase 40-like [Nicotiana tomentosiformis] |
| JMFF041P12 | Sequence | 651 | 009773 (5) | ref|XP_011071372.1| | 2e-102 | PREDICTED: peroxidase 40 [Sesamum indicum] | 588 | 009773 (5) | ref|XP_009619919.1| | 1e-75 | PREDICTED: peroxidase 40-like [Nicotiana tomentosiformis] |
| JMFF042I17 | Sequence | 663 | 005940 (18) | ref|XP_010446199.1| | 9e-132 | PREDICTED: actin-85C [Camelina sativa] | 619 | 009773 (5) | ref|XP_009619919.1| | 6e-61 | PREDICTED: peroxidase 40-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF026B02- ACATATCTTGAG
JMFF041P12- ATATCTTGAG
____________________________________________________________
consensus ACATATCTTGAG
. : . : . : . : . : . :
JMFF026B02- CTTATCCAAGGGGAAAACTTGGAAGAAAAAGAAATGGGAATTTACTTTCCTTTGTTGTGG
JMFF041P12- CTTATCCAAGGGGAAAACTTGGAAGAAAAAGAAATGGGAATTTACTTTCCTTTGTTGTGG
____________________________________________________________
consensus CTTATCCAAGGGGAAAACTTGGAAGAAAAAGAAATGGGAATTTACTTTCCTTTGTTGTGG
. : . : . : . : . : . :
JMFF026B02- TTAATGATAATGAAGGTTTGGGTTGTCACTTCAACCCCAACCACTCTAAATGAAACTTGC
JMFF041P12- TTAATGATAATGAAGGTTTGGGTTGTCACTTCAACCCCAACCACTCTAAATGAAACTTGC
____________________________________________________________
consensus TTAATGATAATGAAGGTTTGGGTTGTCACTTCAACCCCAACCACTCTAAATGAAACTTGC
. : . : . : . : . : . :
JMFF026B02- TTTGATGGTGCCACTGCCACCTTCATGTTGAGCTTTGGTTGGTACCAAGATAGCTGCCCG
JMFF041P12- TTTGATGGTGCCACTGCCACCTTCATGTTGAGCTTTGGTTGGTACCAAGATAGCTGCCCG
____________________________________________________________
consensus TTTGATGGTGCCACTGCCACCTTCATGTTGAGCTTTGGTTGGTACCAAGATAGCTGCCCG
. : . : . : . : . : . :
JMFF026B02- GAGGCCGAGGCCATTGTCTTCGCTTGGGTCGAGAGGGTGGTTTCTGAGGACCCAAGAATG
JMFF041P12- GAGGCCGAGGCCATTGTCTTCGCTTGGGTCGAGAGGGTGGTTTCTGAGGACCCAAGAATG
____________________________________________________________
consensus GAGGCCGAGGCCATTGTCTTCGCTTGGGTCGAGAGGGTGGTTTCTGAGGACCCAAGAATG
. : . : . : . : . : . :
JMFF026B02- GCTGCTTCTTTGCTTCGACTCCATTTCCACGACTGCTTTGTCAATGGATGTGACGCATCG
JMFF041P12- GCTGCTTCTTTGCTTCGACTCCATTTCCACGACTGCTTTGTCAATGGATGTGACGCATCG
____________________________________________________________
consensus GCTGCTTCTTTGCTTCGACTCCATTTCCACGACTGCTTTGTCAATGGATGTGACGCATCG
. : . : . : . : . : . :
JMFF026B02- GTGTTGCTGGATGACACGCCGAATTTCGTGGGAGAGAAAACTGCAGGCCCCAACTTGAAC
JMFF041P12- GTGTTGCTGGATGACACGCCGAATTTCGTGGGAGAGAAAACTGCAGGCCCCAACTTGAAC
____________________________________________________________
consensus GTGTTGCTGGATGACACGCCGAATTTCGTGGGAGAGAAAACTGCAGGCCCCAACTTGAAC
. : . : . : . : . : . :
JMFF026B02- TCCTTGAGGGGTTTTGAAGTGATAGACTCAATCAAAGCTGATATTGAATTTGTGTGCCCT
JMFF041P12- TCCTTGAGGGGTTTTGAAGTGATAGACTCAATCAAAGCTGATATTGAATTTGTGTGCCCT
rJMFF026B02+ GAGGGGTTTTGAAGTGATAGACTCAATCAAAGCTGATATTGAATTTGTGTGCCCT
____________________________________________________________
consensus TCCTTGAGGGGTTTTGAAGTGATAGACTCAATCAAAGCTGATATTGAATTTGTGTGCCCT
. : . : . : . : . : . :
JMFF026B02- GGGACAGTGTCCTGCGCTGATATTCTCGCCATTGCTGCCAGAGATTCTGTCCTTCTGTCA
JMFF041P12- GGAACAGTGTCCTGCGCTGATATTCTCGCCATTGCTGCCAGAGATTCTGTCCTTCTGTCA
rJMFF026B02+ GGGACAGTGTCCTGCGCTGATATTCTCGCCATTGCTGCCAGAGATTCTGTCCTTCTGTCA
____________________________________________________________
consensus GGGACAGTGTCCTGCGCTGATATTCTCGCCATTGCTGCCAGAGATTCTGTCCTTCTGTCA
. : . : . : . : . : . :
JMFF026B02- GGTGGTCCAACATGGGAAGTGGAAATGGGGAGGAAAGACAGCATTANTGCTAGCAAAACA
JMFF041P12- GGTGGTCCAACATGGGAAGTGGAAATGGGGAGGAAAGACAGCATTAGTGCTAGCAAAACA
rJMFF041P12+ CAGCATTAGTGCTAGCAAAACA
rJMFF026B02+ GGTGGTCCAACATGGGAAGTGGAAATGGGGAGGAAAGACAGCATTAGTGCTAGCAAAACA
____________________________________________________________
consensus GGTGGTCCAACATGGGAAGTGGAAATGGGGAGGAAAGACAGCATTAGTGCTAGCAAAACA
. : . : . : . : . : . :
JMFF026B02- GCAGCAAATAACAACATTCCTGGACCCAATTCTGATGTTCCA
JMFF041P12- GCAGCAAATAACAACATTCCTGGACCCAATTCTGATGTTCCAACCTTAGTATCCAGGTTC
rJMFF041P12+ GCAGCAAATAACAACATTCCTGGACCCAATTCTGATGTTCCAACCTTAGTATCCAGGTTC
rJMFF026B02+ GCAGCAAATAACAACATTCCTGGACCCAATTCTGATGTTCCAACCTTAGTATCCAGGTTC
rJMFF042I17+ GTTC
____________________________________________________________
consensus GCAGCAAATAACAACATTCCTGGACCCAATTCTGATGTTCCAACCTTAGTATCCAGGTTC
. : . : . : . : . : . :
JMFF041P12- CAAAACCTCGGTCTCACCCTCCAAGACATGGTTACTCTCTC
rJMFF041P12+ CAAAACCTCGGTCTCACCCTCCAAGACATGGTTACTCTCTCCGGCGCACATACAGTAGGT
rJMFF026B02+ CAAAACCTCGGTCTCACCCTCCAAGACATGGTTACTCTCTCCGGCGCACATACAGTAGGT
rJMFF042I17+ CAAAACCTCGGTCTCACCCTCCAAGACATGGTTACTCTCTCCGGCGCACATACAGTAGGT
____________________________________________________________
consensus CAAAACCTCGGTCTCACCCTCCAAGACATGGTTACTCTCTCCGGCGCACATACAGTAGGT
. : . : . : . : . : . :
rJMFF041P12+ AAGGCGAGGTGTTTCACGTTCAACTCCAGGCTTAGCAGCGGCAACGCACCGGATGTGAAC
rJMFF026B02+ AAGGCGAGGTGTTTCACGTTCAACTCCAGGCTTAGCAGCGGCAACGCACCGGATGTGAAC
rJMFF042I17+ AAGGCGAGGTGTTTCACGTTCAACTCCAGGCTTAGCAGCGGCAACGCACCGGATGTGAAC
____________________________________________________________
consensus AAGGCGAGGTGTTTCACGTTCAACTCCAGGCTTAGCAGCGGCAACGCACCGGATGTGAAC
. : . : . : . : . : . :
rJMFF041P12+ GGCGAGTTTCTGCAGTCACTCCAGCAGCTGTGTTCTGTATCCGACGTTAACGCCACACTG
rJMFF026B02+ GGCGAGTTTCTGCAGTCACTCCAGCAGCTGTGTTCTGTATCCGACGTTAACGCCACACTG
rJMFF042I17+ GGCGAGTTTCTGCAGTCACTCCAGCAGCTGTGTTCTGTATCCGACGTTAACGCCACACTG
____________________________________________________________
consensus GGCGAGTTTCTGCAGTCACTCCAGCAGCTGTGTTCTGTATCCGACGTTAACGCCACACTG
. : . : . : . : . : . :
rJMFF041P12+ GCAGACCTGGACGCCGCAACCCCTGCAAATTTCGACAATCAGTACTACCTCAACCTTGTC
rJMFF026B02+ GCAGACCTGGACGCCGCAACCCCTGCAAATTTCGACAATCAGTACTACCTCAACCTTGTC
rJMFF042I17+ GCAGACCTGGACGCCGCAACCCCTGCAAATTTCGACAATCAGTACTACCTCAACCTTGTC
____________________________________________________________
consensus GCAGACCTGGACGCCGCAACCCCTGCAAATTTCGACAATCAGTACTACCTCAACCTTGTC
. : . : . : . : . : . :
rJMFF041P12+ GCCGGCAAGGGTTTGCTCACTTCGGACCAGGTTCTGGCCACCGGCGATGATCAAACACGG
rJMFF026B02+ GCCGGCAAGGGTTTGCTCACTTCGGACCAGGTTCTGGCCACCGGCGATGATCAAACACGG
rJMFF042I17+ GCCGGCAAGGGTTTGCTCACTTCGGACCAGGTTCTGGCCACCGGCGATGATCAAACACGG
____________________________________________________________
consensus GCCGGCAAGGGTTTGCTCACTTCGGACCAGGTTCTGGCCACCGGCGATGATCAAACACGG
. : . : . : . : . : . :
rJMFF041P12+ GGAATCGTCGAGTCGTACATTGACGACCCGACGCTGTTCTTCGAGAGCTTTAAGAGGTCA
rJMFF026B02+ GGAATCGTCGAGTCGTACATTGACGACCCGACGCTGTTCTTCGAGAGCTTTAAGAGGTCA
rJMFF042I17+ GGAATCGTCGAGTCGTACATTGACGACCCGACGCTGTTCTTCGAGAGCTTTAAGAGGTCA
____________________________________________________________
consensus GGAATCGTCGAGTCGTACATTGACGACCCGACGCTGTTCTTCGAGAGCTTTAAGAGGTCA
. : . : . : . : . : . :
rJMFF041P12+ ATGATGAAGATGGGACGCTTGGCGCCAGGTGATGGAGAAGGTGGAGAGATTCGTAAAAAC
rJMFF026B02+ ATGATGAAGATGGGACGCTTGGCGCCAGGTGATGGAGAAGGTGGAGAGATTCGTAAAAAC
rJMFF042I17+ ATGATGAAGATGGGACGCTTGGCGCCAGGTGATGGAGAAGGTGGAGAGATTCGTAAAAAC
____________________________________________________________
consensus ATGATGAAGATGGGACGCTTGGCGCCAGGTGATGGAGAAGGTGGAGAGATTCGTAAAAAC
. : . : . : . : . : . :
rJMFF041P12+ TGTAGGGTTGTTAATGAACTCAATTTCTGACTCACTGTAATCACTATCAAGCTCTCATGT
rJMFF026B02+ TGTAGGGTTGTTAATGAACTCAATTTCTGACTCACTGTAATCACTATCAAGCTCTCATGT
rJMFF042I17+ TGTAGGGTTGTTAATGAACTCAATTTCTGACTCACTGTAATCACTATCAAGCTCTCATGT
____________________________________________________________
consensus TGTAGGGTTGTTAATGAACTCAATTTCTGACTCACTGTAATCACTATCAAGCTCTCATGT
. : . : . : . : . : . :
rJMFF041P12+ AGTATCAAAATCACACCTCTATTA
rJMFF026B02+ AGTATCAAAATCACACCTCTATTATCATCCTTTATTTCTATCTACCTATAAG
rJMFF042I17+ AGTATCAAAATCACACCTCTATTATCATCCTTTATTTCTATCTACCTATAAGTGAATCCT
____________________________________________________________
consensus AGTATCAAAATCACACCTCTATTATCATCCTTTATTTCTATCTACCTATAAGTGAATCCT
. : . : . : . : . : . :
rJMFF042I17+ TTGTTATCATAAAAGTACTAATCTCATATAATACAAAAACTAAATCTAATATTACCCTAT
____________________________________________________________
consensus TTGTTATCATAAAAGTACTAATCTCATATAATACAAAAACTAAATCTAATATTACCCTAT