| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004P17 | Sequence | 360 | 008067 (8) | emb|CDP14282.1| | 2e-17 | unnamed protein product [Coffea canephora] | 755 | 009767 (6) | ref|XP_009590582.1| | 3e-108 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana tomentosiformis] |
| JMFF041N16 | Sequence | 642 | 008067 (8) | emb|CDP14282.1| | 1e-83 | unnamed protein product [Coffea canephora] | 595 | 009767 (6) | ref|XP_009590582.1| | 3e-58 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana tomentosiformis] |
| JMFN029C10 | Sequence | 612 | 009767 (6) | ref|XP_009769700.1| | 2e-87 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana sylvestris] | |||||
| JMSF023D10 | Sequence | 677 | 008067 (8) | emb|CDP14282.1| | 4e-86 | unnamed protein product [Coffea canephora] | 688 | 009767 (6) | ref|XP_009590582.1| | 2e-92 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana tomentosiformis] |
| JMSF035H13 | Sequence | 681 | 008067 (8) | ref|XP_009769700.1| | 2e-101 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana sylvestris] | 758 | 009767 (6) | ref|XP_009769700.1| | 3e-93 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana sylvestris] |
| JMSF044G01 | Sequence | 683 | 008067 (8) | emb|CDP14282.1| | 1e-90 | unnamed protein product [Coffea canephora] | 771 | 009767 (6) | ref|XP_009590582.1| | 3e-109 | PREDICTED: lipid phosphate phosphatase delta [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF035H13+ TCCTACACCCAG
____________________________________________________________
consensus TCCTACACCCAG
. : . : . : . : . : . :
rJMSF035H13+ AATGAAGATCTTTCCACAGAGTTAGCAGGACTTGCGGTGATTTCTTTGCTTGTGGGACTG
____________________________________________________________
consensus AATGAAGATCTTTCCACAGAGTTAGCAGGACTTGCGGTGATTTCTTTGCTTGTGGGACTG
. : . : . : . : . : . :
JMFN029C10- CTTGATTGACATTATTGGAGGTCTC
rJMSF035H13+ ATTGGTTTAGGAAGAATTTACCTTGGGATGCACAGCTTGATTGACATTATTGGAGGTCTC
rJMFF004P17+ GGATGCACAGCTTGATTGACATTATTGGAGGTCTA
rJMSF044G01+ TACCTTGGGATGCACAGCTTGATTGACATTATTGGAGGTCTA
____________________________________________________________
consensus ATTGGTTTAGGAAGAATTTACCTTGGGATGCACAGCTTGATTGACATTATTGGAGGTCTC
. : . : . : . : . : . :
JMFN029C10- GCTATTGGACTGGCAATCCTGGCATTTTGGATTTTTGCTCATAGTTACATAGACAGTTTC
rJMSF035H13+ GCTATTGGACTGGCAATCCTGGCATTTTGGATTTTTGCTCATAGTTACATAGACAGTTTC
rJMSF023D10+ GCTCTCTGTTCACAATTACTTAGACGATTTC
rJMFF004P17+ GCTTTTGGACTGGCAATCCTGGCATTTTGGCTCTCTGTTCACAATTACTTAGACGATTTC
rJMSF044G01+ GCTTTTGGACTGGCAATCNTGGCATTTTGGCTCTCTGTTCACAATTACTTAGACGATTTC
____________________________________________________________
consensus GCTATTGGACTGGCAATCCTGGCATTTTGGCTTTTTGTTCATAGTTACTTAGACGGTTTC
. : . : . : . : . : . :
JMFN029C10- ATAGTTTCAGGACAAAATGTTGCATCCTTTTGGACCGCACTTGCGTTCTTATTGCTCTTT
rJMSF035H13+ ATAGTTTCAGGACAAAATGTTGCATCCTTTTGGACCGCACTTGCGTTCTTATTGCTCTTT
rJMSF023D10+ ATAGTTTCAGGACAAAATGTTACATCCTTTTGGAGCGCACTAACCTTCTTGTTGCTCTTT
rJMFF004P17+ ATAGTTTCAGGACAAAATGTTACATCCTTTTGGAGCGCACTAACCTTCTTGTTGCTCTTT
rJMSF044G01+ ATAGTTTCAGGACAAAATGTTACATCCTTTTGGAGCGCACTAACCTTCTTGTTGCTCTTT
____________________________________________________________
consensus ATAGTTTCAGGACAAAATGTTGCATCCTTTTGGAGCGCACTTGCGTTCTTGTTGCTCTTT
. : . : . : . : . : . :
JMFN029C10- GCTTACCCAACTCCCGAGTTGCCTACTCCAAGTTTTGAATACCATACAGCTTTCAATGGC
rJMSF035H13+ GCTTACCCAACTCCCGAGTTGCCTACTCCAAGTTTTGAATACCATACAGCTTTCAATGGC
rJMSF023D10+ GCCTATCCAACCCCGGAGCAGCCTACTCCAAGTTTCGAATATCATACAGCCTTCAACGGT
rJMFF004P17+ GCCTATCCAACCCCGGAGCAGCCTACTCCAAGTTTCGAATATCATACAGCCTTCAACGGT
rJMSF044G01+ GCCTATCCAACCCCGGAGCAGCCTACTCCAAGTTTCGAATATCATACAGCCTTCAACGGT
____________________________________________________________
consensus GCTTATCCAACTCCGGAGTTGCCTACTCCAAGTTTTGAATATCATACAGCTTTCAATGGT
. : . : . : . : . : . :
JMFN029C10- GTTGCTTTGGGAATTGTAATTGGAGTCCAGCAAACATATCATCAGTTTCACCATGAAAAC
rJMSF035H13+ GTTGCTTTGGGAATTGTAATTGGAGTCCAGCAAACATATCATCAGTTTCACCATGAAAAC
rJMSF023D10+ GTTGCTTTGGGAATTGTATCTGGAATCCAGCAAACTTACCATCAGTTTCACCATGAAGAT
rJMFF004P17+ GTTGCTTTGGGAATTGTATCTGGAATCCAGCAAACTTACCATCAGTTTCACCATGAAGAT
rJMSF044G01+ GTTGCTTTGGGAATTGTATCTGGAATCCAGCAAACTTACCATCAGTTTCACCATGAAGAT
rJMFF041N16+ TGCTTTGGGAATTGTATCTGGAATCCAGCAAACTTACCATCAGTTTCACCATGAAGAT
____________________________________________________________
consensus GTTGCTTTGGGAATTGTATCTGGAATCCAGCAAACTTACCATCAGTTTCACCATGAAGAT
. : . : . : . : . : . :
JMFN029C10- GTTCCACGGATCTTTACTCCTCAGCTCTCGTTCCCTGCATTCGTGGGTAGAATGCTAGTC
rJMSF035H13+ GTTCCACGGATCTTTACTCCTCAGCTCTCGTTCCCTGCATTCGTGGGTAGAATGCTAGTC
rJMSF023D10+ GTTCCAAAGGTCTTTAC---TGAGCTCTCGATCCCTGCATTTGTCAGTAGAATGCTAGTG
rJMFF004P17+ GTTCCAAAGGTCTTTAC---TGAGCTCTCGATCCCTGCATTTGTCAGTAGAATGCTAGTG
rJMSF044G01+ GTTCCAAAGGTCTTTAC---TGAGCTCTCGATCCCTGCATTTGTCAGTAGAATGCTAGTG
rJMFF041N16+ GTTCCAAAGGTCTTTAC---TGAGCTCTCGATCCCTGCATTTGTCAGTAGAATGCTAGTG
____________________________________________________________
consensus GTTCCAAAGGTCTTTAC---TGAGCTCTCGATCCCTGCATTTGTCAGTAGAATGCTAGTG
. : . : . : . : . : . :
JMFN029C10- GGGCTTCCAACAATACTGCTCGTGAAGTACTGTAGCAAGGCTCTTGCCAAGCGCACGCTG
rJMSF035H13+ GGGCTTCCAACAATACTGCTCGTGAAGTACTGTAGCAAGGCTCTTGCCAAGCGCACGCTG
rJMSF023D10+ GGAATACCAACAATACTCCTAGTGAAGTTCTGCAGCAAGGCTCTCGCGAAATGGATGCTA
rJMFF004P17+ GGAATACCAACAATACTCCTAGTGAAGTTCTGCAGCAAGGCTCTCGCGAAATGGATGCTA
rJMSF044G01+ GGAATACCAACAATACTCCTAGTGAAGTTCTGCAGCAAGGCTCTCGCGAAATGGATGCTA
rJMFF041N16+ GGAATACCAACAATACTCCTAGTGAAGTTCTGCAGCAAGGCTCTCGCGAAATGGATGCTA
____________________________________________________________
consensus GGAATACCAACAATACTCCTAGTGAAGTTCTGCAGCAAGGCTCTCGCGAAATGGATGCTA
. : . : . : . : . : . :
JMFN029C10- CCCATGCTTGCCAATGCCCTGAGCATCCCGATAAGATCAACCAGCTA
rJMSF035H13+ CCCATGCTTGCCAATGCCCTGAGCATCCCGATAAGATCAACCAGCTA
rJMSF023D10+ CCCATGCTCGCCAACGCCCTGAGCCTCCCGGTAAGATCAACGAGCTATGTCCCGGGGCTA
rJMFF004P17+ CCCATGCTCGCCAACGCCCTGAGCCTCCCGGTAAGATCAACGAGCTATGTCCCGGGGCTA
rJMSF044G01+ CCCATGCTCGCCAACGCCCTGAGCCTCCCGGTAAGATCAACGAGCTATGTCCCGGGGNTA
rJMFF041N16+ CCCATGCTCGCCAACGCCCTGAGCCTCCCGGTAAGATCAACGAGCTATGTCCCGGGGCTA
____________________________________________________________
consensus CCCATGCTCGCCAACGCCCTGAGCCTCCCGGTAAGATCAACGAGCTATGTCCCGGGGCTA
. : . : . : . : . : . :
rJMSF023D10+ AGCAGCTCTGCCATCACCAAGAAGTCGGATGAAACAAAGCCTGCCTCGGGTTATCTGCAA
rJMFF004P17+ AGCAGCTCTGCCATCACCAAGAAGTCGGATGAAACAAAGCCTGCCTCGGGTTATCTGCAA
rJMSF044G01+ AGCAGCTCTGCCATCACCAAGAAGTCGGATGAAACAAAGCCTGCCTCGGGTTATCTGCAA
rJMFF041N16+ AGCAGCTCTGCCATCACCAAGAAGTCGGATGAAACAAAGCCTGCCTCGGGTTATCTGCAA
____________________________________________________________
consensus AGCAGCTCTGCCATCACCAAGAAGTCGGATGAAACAAAGCCTGCCTCGGGTTATCTGCAA
. : . : . : . : . : . :
rJMSF023D10+ AAATTGTTCTTTTTCTCCCAACAGGACTCGTTCGATGTGGATACAGGCATTCGACTCCTT
rJMFF004P17+ AAATTGTTCTTTTTCTCCCAACAGGACTCGTTCGATGTGGATACAGGCATTCGACTCCTT
rJMSF044G01+ AAATTGTTCTTTTTCTCCCAACAGGACTCGTTCGATGTGGATACAGGCATTCGACTCCTT
rJMFF041N16+ AAATTGTTCTTTTTCTCCCAACAGGACTCGTTCGATGTGGATACAGGCATTCGACTCCTT
____________________________________________________________
consensus AAATTGTTCTTTTTCTCCCAACAGGACTCGTTCGATGTGGATACAGGCATTCGACTCCTT
. : . : . : . : . : . :
rJMSF023D10+ CAGTACACCGGCCTCGGCTGGGCTGTCGTAGATCTTGTTCCATCTTTATTCACTTACCTA
rJMFF004P17+ CAGTACACCGGCCTCGGCTGGGCTGTCGTAGATCTTGTTCCATCTTTATTCACTTACCTA
rJMSF044G01+ CAGTACACCGGCCTCGGCTGGGCTGTCGTAGATCTTGTTCCATCTTTATTCACTTACCTA
rJMFF041N16+ CAGTACACCGGCCTCGGCTGGGCTGTCGTAGATCTTGTTCCATCTTTATTCACTTACCTA
____________________________________________________________
consensus CAGTACACCGGCCTCGGCTGGGCTGTCGTAGATCTTGTTCCATCTTTATTCACTTACCTA
. : . : . : . : . : . :
rJMSF023D10+ AGACTCTGATGCTTTTGTACTTTCATCATGTCATAGAAATCCAATGCATATTTTATTTGT
rJMFF004P17+ AGACTCTGATGCTTTTGTACTTTCATCATGTCATAGAAATCCAATGCATATTTTATTTGT
rJMSF044G01+ AGACTNTGATGCTTTTGTACTTTCATCATGTCATAGAAATCCAATGCATATTTTATTTGT
rJMFF041N16+ AGACTCTGATGCTTTTGTACTTTCATCATGTCATAGAAATCCAATGCATATTTTATTTGT
____________________________________________________________
consensus AGACTCTGATGCTTTTGTACTTTCATCATGTCATAGAAATCCAATGCATATTTTATTTGT
. : . : . : . : . : . :
rJMSF023D10+ GTGTAAATCATGAGGAATCTCGAAACGCTCCGAGAGGCACTGGTCCAAGAGGAATTGTCA
rJMFF004P17+ GTGTAAATCATGAGGAATCTCGAAACGCTCCGAGAGGCACTGGTCCAAGAGGAATTGTCA
rJMSF044G01+ GTGTAAATCATGAGGAATCTCGAAACGCTCCGAGAGGCACTGGTCCAAGAGGAATTGTCA
rJMFF041N16+ GTGTAAATCATGAGGAATCTCGAAACGCTCCGAGAGGCACTGGTCCAAGAGGAATTGTCA
____________________________________________________________
consensus GTGTAAATCATGAGGAATCTCGAAACGCTCCGAGAGGCACTGGTCCAAGAGGAATTGTCA
. : . : . : . : . : . :
rJMSF044G01+ C
rJMFF041N16+ CTTGTGAAAATCAAATTCAGGTTATCTCGAAAATTGTTTCCACAAAGAAATTTATTTGCC
____________________________________________________________
consensus CTTGTGAAAATCAAATTCAGGTTATCTCGAAAATTGTTTCCACAAAGAAATTTATTTGCC