| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014L08 | Sequence | 522 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 3e-70 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 618 | 009766 (6) | ref|XP_004136907.1| | 3e-97 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
| JMFF016O17 | Sequence | 525 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 3e-70 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 686 | 009766 (6) | ref|XP_004136907.1| | 7e-97 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
| JMFF019E17 | Sequence | 595 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 2e-63 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 718 | 009766 (6) | ref|XP_004136907.1| | 6e-107 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
| JMFF041K12 | Sequence | 632 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 1e-104 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 624 | 009766 (6) | ref|XP_004297515.1| | 3e-87 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Frag |
| JMSF018A06 | Sequence | 346 | 008781 (5) | emb|CDP06857.1| | 5e-10 | unnamed protein product [Coffea canephora] | 667 | 009766 (6) | ref|XP_004297515.1| | 4e-104 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Frag |
| JMSF031O23 | Sequence | 649 | 008775 (5) | ref|XP_009789880.1| | 8e-102 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [Nicotiana s | 650 | 009766 (6) | ref|XP_004136907.1| | 4e-104 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
This contig is upended
. : . : . : . : . : . :
rJMSF018A06+ GAAGTCATGACT
rJMSF031O23+ GAAGTCATGACT
rJMFF019E17+ CTCNTCATCTTTGACGAAGTCATGACT
____________________________________________________________
consensus CTCNTCATCTTTGACGAAGTCATGACT
. : . : . : . : . : . :
rJMFF014L08+ GTATGGTGGGGCCCAGGAGTATTTTGGCATAACTCCCGATTTGACG
rJMSF018A06+ GGATTTCGCCTCTCGTATGGTGGGGCCCAGGAGTATTTTGGCATAACTCCCGATTTGACG
rJMSF031O23+ GGATTTCGCCTCTCGTATNGTGGGGCCCAGGAGTATTTTGGCATAACTCCCGATTTGACG
rJMFF019E17+ GGATTTCGCCTCTCGTATGGTGGGGCCCAGGAGTATTTTGGCATAACTCCCGATTTGACG
rJMFF016O17+ GTATGGTGGGGCCCAGGAGTATTTTGGCATAACTCCCGATTTGACG
____________________________________________________________
consensus GGATTTCGCCTCTCGTATGGTGGGGCCCAGGAGTATTTTGGCATAACTCCCGATTTGACG
. : . : . : . : . : . :
rJMFF014L08+ ACGCTCGGGAAGATCATTGGCGGCGGCCTGCCTGTCGGGGCGTACGGCGGGAGGAGGGAT
rJMSF018A06+ ACGCTCGGGAAGATCATTGGCGGCGGCCTGCCTGTCGGGGCGTACGGCGGGAGGAGGGAT
rJMSF031O23+ ACGCTCGGGAAGATCATTGGCGGCGGCCTGCCTGTCGGGGCGTACGGCGGGAGGAGGGAT
rJMFF019E17+ ACGCTCGGGAAGATCATTGGCGGCGGCCTGCCTGTCGGGGCGTACGGCGGGAGGAGGGAT
rJMFF016O17+ ACGCTCGGGAAGATCATTGGCGGCGGCCTGCCTGTCGGGGCGTACGGCGGGAGGAGGGAT
rJMFF041K12+ GGGGCGTACGGCGGGAGGAGGGAT
____________________________________________________________
consensus ACGCTCGGGAAGATCATTGGCGGCGGCCTGCCTGTCGGGGCGTACGGCGGGAGGAGGGAT
. : . : . : . : . : . :
rJMFF014L08+ ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
rJMSF018A06+ ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
rJMSF031O23+ ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
rJMFF019E17+ ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
rJMFF016O17+ ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
rJMFF041K12+ ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
____________________________________________________________
consensus ATTATGGAGATGGTAGCACCTGCTGGACCTATGTATCAGGCCGGGACGTTGAGTGGAAAC
. : . : . : . : . : . :
rJMFF014L08+ CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
rJMSF018A06+ CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
rJMSF031O23+ CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
rJMFF019E17+ CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
rJMFF016O17+ CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
rJMFF041K12+ CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
____________________________________________________________
consensus CCGCTAGCAATGACAGCGGGAATCCACACGCTAAAGCGGTTAAAGGAGCCGGGAAGCTAC
. : . : . : . : . : . :
rJMFF014L08+ GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
rJMSF018A06+ GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
rJMSF031O23+ GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
rJMFF019E17+ GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
rJMFF016O17+ GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
rJMFF041K12+ GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
____________________________________________________________
consensus GAGTACTTGAAAAACGTCACGAGTGAACTAATCGAGGGCATTGTGGGTGCGGGAAAGAAG
. : . : . : . : . : . :
rJMFF014L08+ GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
rJMSF018A06+ GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
rJMSF031O23+ GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
rJMFF019E17+ GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
rJMFF016O17+ GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
rJMFF041K12+ GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
____________________________________________________________
consensus GCTGGTCATGCAATTTCCGGTGGGTATATCAGTGGCATGTTCGGTTTCTTCTTCATGGAT
. : . : . : . : . : . :
rJMFF014L08+ GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
rJMSF018A06+ GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
rJMSF031O23+ GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
rJMFF019E17+ GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
rJMFF016O17+ GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
rJMFF041K12+ GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
____________________________________________________________
consensus GGCCCCGTTTACAACTTTGCTGATGCAAAGAAGAGCGACACTGCCAAATTCGCGAGGTTC
. : . : . : . : . : . :
rJMFF014L08+ TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
rJMSF018A06+ TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
rJMSF031O23+ TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
rJMFF019E17+ TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
rJMFF016O17+ TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
rJMFF041K12+ TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
____________________________________________________________
consensus TTTAGAGGAATGCTAGAGGAAGGCGTCTATTTCGCGCCTTCCCAGTTCGAAGCTGGATTC
. : . : . : . : . : . :
rJMFF014L08+ ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
rJMSF018A06+ ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
rJMSF031O23+ ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
rJMFF019E17+ ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
rJMFF016O17+ ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
rJMFF041K12+ ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
____________________________________________________________
consensus ACGGGCTTAGCGCATACTCCCGAGGATATTCAAAACACGATAGCTGCTGCTGAGAGGGTG
. : . : . : . : . : . :
rJMFF014L08+ TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTGTTTAGGTAATT
rJMSF018A06+ TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTGTTTAGGTAATT
rJMSF031O23+ TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTGTTTAGGTAATT
rJMFF019E17+ TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTTTTTAGGTAATT
rJMFF016O17+ TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTGTTTAGGTAATT
rJMFF041K12+ TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTGTTTAGGTAATT
____________________________________________________________
consensus TTCAAGAAACTGTGATATTTATTGATGCCTTTTCTCTTGATCCTTTTTGTTTAGGTAATT
. : . : . : . : . : . :
rJMFF014L08+ AAGGATTACACTTTTGTAAGACACCTTTGTTT
rJMSF018A06+ AAGGATTACACTTTTGTAAGACACCTTTGTTTGTTTGTTTGTTTGTT
rJMSF031O23+ AAGGATTACACTTTTGTAAGACACCTT
rJMFF019E17+ AAGGATTACACTTTTGTAAGACACCTTTGTTTGTTTGTTTGTTTGTTTGGAGGGACAGCA
rJMFF016O17+ AAGGATTACACTTTTGTAAGACACCTTTGTTTGTTTGTTTGTTTGTTNGGAGGGACAGCA
rJMFF041K12+ AAGGATTACACTTTTGTAAGACACCTTTGTTTGTTTGTTTGTTTGTTTGGAGGGACAGCA
____________________________________________________________
consensus AAGGATTACACTTTTGTAAGACACCTTTGTTTGTTTGTTTGTTTGTTTGGAGGGACAGCA
. : . : . : . : . : . :
rJMFF019E17+ TTTTTGTAATCTAGATGCTTGTATCATACCT
rJMFF016O17+ TTTTTGTAATCTAGATGCTTGTATCATACCT
rJMFF041K12+ TTTTTGTAATCTAGATGCTTGTATCATACCTTAATGCTGAAATTGTGGTCTATTTCTTAT
____________________________________________________________
consensus TTTTTGTAATCTAGATGCTTGTATCATACCTTAATGCTGAAATTGTGGTCTATTTCTTAT