| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008P21 | Sequence | 678 | 009761 (5) | ref|XP_006338294.1| | 7e-64 | PREDICTED: xyloglucan glycosyltransferase 4-like [Solanum tuberosum] | |||||
| JMFF012L06 | Sequence | 525 | 007451 (4) | ref|XP_009786792.1| | 2e-31 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | 757 | 009761 (5) | ref|XP_004232109.1| | 2e-80 | PREDICTED: xyloglucan glycosyltransferase 4 [Solanum lycopersicum] |
| JMFF036A09 | Sequence | 386 | 007451 (4) | ref|XP_009786792.1| | 6e-10 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | 734 | 009761 (5) | ref|XP_006338294.1| | 4e-76 | PREDICTED: xyloglucan glycosyltransferase 4-like [Solanum tuberosum] |
| JMFF041C14 | Sequence | 639 | 007451 (4) | ref|XP_009786792.1| | 3e-41 | PREDICTED: xyloglucan glycosyltransferase 4 [Nicotiana sylvestris] | 603 | 009761 (5) | ref|XP_006338294.1| | 6e-43 | PREDICTED: xyloglucan glycosyltransferase 4-like [Solanum tuberosum] |
| JMSF049J01 | Sequence | 750 | 009761 (5) | ref|XP_004232109.1| | 4e-73 | PREDICTED: xyloglucan glycosyltransferase 4 [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMSF049J01+ GCATCATACTTCCCCTAACAAT
____________________________________________________________
consensus GCATCATACTTCCCCTAACAAT
. : . : . : . : . : . :
rJMSF049J01+ GTTCATCCCAGAAGCCGAATTACCACCTTGGGTGATATGTTACATTCCCCATTGTCATGT
rJMFF012L06+ TCCCAGAAGCCGAATTACCACCTTGGGTGATATGTTACATT-CCCATNGTCATGT
rJMFF036A09+ CCCATTGTCATGT
____________________________________________________________
consensus GTTCATCCCAGAAGCCGAATTACCACCTTGGGTGATATGTTACATTCCCCATTGTCATGT
. : . : . : . : . : . :
rJMSF049J01+ CCATCTTGAACATCCTTCCCTCACCAAAATCTTTCCCCTTTCTCGTACCCTACCTCCTCT
rJMFF012L06+ CCATCTTGAACATCCTTCCCTCACCAAAATCTTTCCCCTTTCTCGTACCCTACCTCCTCT
rJMFF036A09+ CCATCTTGAACATCCTTCCCTCACCAAAATCTTTCCCCTTTCTCGTACCCTACCTCCTCT
rJMFF008P21+ AAATCTTTCCCCTTTCTCGTACCCTACCTCCTCT
____________________________________________________________
consensus CCATCTTGAACATCCTTCCCTCACCAAAATCTTTCCCCTTTCTCGTACCCTACCTCCTCT
. : . : . : . : . : . :
rJMSF049J01+ TCGAAAACACCATGTCGGTCACCAAGTTCAACGCCATGGTCTCGGGCCTGTTCCAGCTAG
rJMFF012L06+ TCGAAAACACCATGTCGGTCACCAAGTTCAACGCCATGGTCTCGGGCCTGTTCCAGCTAG
rJMFF036A09+ TCGAAAACACCATGTCGGTCACCAAGTTCAACGCCATGGTCTCGGGCCTGTTCCAGCTAG
rJMFF008P21+ TCGAAAACACCATGTCGGTCACCAAGTTCAACGCCATGGTCTCGGGCCTGTTCCAGCTAG
rJMFF041C14+ TAG
____________________________________________________________
consensus TCGAAAACACCATGTCGGTCACCAAGTTCAACGCCATGGTCTCGGGCCTGTTCCAGCTAG
. : . : . : . : . : . :
rJMSF049J01+ GCAGTGCCTATGAGTGGGTGGTCACAAAGAAGACAGGCAGGTCATCTGAATCAGACCTGC
rJMFF012L06+ GCAGTGCCTATGAGTGGGTGGTCACAAAGAAGACAGGCAGGTCATCTGAATCAGACCTGC
rJMFF036A09+ GCAGTGCCTATGAGTGGGTGGTCACAAAGAAGACAGGCAGGTCATCTGAATCAGACCTGC
rJMFF008P21+ GCAGTGCCTATGAGTGGGTGGTCACAAAGAAGACAGGCAGGTCATCTGAATCAGACCTGC
rJMFF041C14+ GCAGTGCCTATGAGTGGGTGGTCACAAAGAAGACAGGCAGGTCATCTGAATCAGACCTGC
____________________________________________________________
consensus GCAGTGCCTATGAGTGGGTGGTCACAAAGAAGACAGGCAGGTCATCTGAATCAGACCTGC
. : . : . : . : . : . :
rJMSF049J01+ TGGCATTTGCTGAGAGGGAATCCAAGAGCCTCCAGGGGGACAAAATCACGAGGCGGCTCT
rJMFF012L06+ TGGCATTTGCTGGGAGGGAATCCAAGAGCCTCCAGGGGGACAAAATCACGAGGCGGCTCT
rJMFF036A09+ TGGCATTTGCTGGGAGGGAATCCAAGAGCCTCCAGGGGGACAAAATCACGAGGCGGCTCT
rJMFF008P21+ TGGCATTTGCTGAGAGGGAATCCAAGAGCCTCCAGGGGGACAAAATCACGAGGCGGCTCT
rJMFF041C14+ TGGCATTTGCTGAGAGGGAATCCAAGAGCCTCCAGGGGGACAAAATCACGAGGCGGCTCT
____________________________________________________________
consensus TGGCATTTGCTGAGAGGGAATCCAAGAGCCTCCAGGGGGACAAAATCACGAGGCGGCTCT
. : . : . : . : . : . :
rJMSF049J01+ CGGAATCAGGGCTCGAAATGTATGGCAAACTGAAGGAGCAAGAGCAAGAGGTCCCAATGG
rJMFF012L06+ CGGAATCAGGGCTCGAAATGTATGGCAAACTGAAGGAGCAAGAGCAAGAGGTCCCAATGG
rJMFF036A09+ CGGAATCAGGGCTCGAAATGTATGGCAAACTGAAGGAGCAAGAGCAAGAGGTCCCAATGG
rJMFF008P21+ CGGAATCAGGGCTCGAAATGTATGGCAAACTGAAGGAGCAAGAGCAAGAGGTCCCAATGG
rJMFF041C14+ CGGAATCAGGGCTCGAAATGTATGGCAAACTGAAGGAGCAAGAGCAAGAGGTCCCAATGG
____________________________________________________________
consensus CGGAATCAGGGCTCGAAATGTATGGCAAACTGAAGGAGCAAGAGCAAGAGGTCCCAATGG
. : . : . : . : . : . :
rJMSF049J01+ AAACCAAGAAGAAGAAGAAGCAGAACAGGATTTACAGAAAGGAACTAACACTTGCTTTCC
rJMFF012L06+ AAACCAAGAAGAAGAAGAAGCAGAACAGGATTTACAGAAAGGAACTAACACTTGCTTTCC
rJMFF036A09+ AAACCAAGAAGAAGAAGAAGCAGAACAGGATTTACAGAAAGGAACTAACACTTGCTTTCC
rJMFF008P21+ AAACCAAGAAGAAGAAGAAGCAGAACAGGATTTACAGAAAGGAACTAACACTTGCTTTCC
rJMFF041C14+ AAACCAAGAAGAAGAAGAAGCAGAACAGGATTTACAGAAAGGAACTAACACTTGCTTTCC
____________________________________________________________
consensus AAACCAAGAAGAAGAAGAAGCAGAACAGGATTTACAGAAAGGAACTAACACTTGCTTTCC
. : . : . : . : . : . :
rJMSF049J01+ TTCTCCTCACTGCTGCTGCAAGAAGCTTATTGTCTGCCCAGGGGATCCATTTCTATTACC
rJMFF012L06+ TTCTCCTCACTGCTGCTGCAAGAAGCTTATTGTCTGCCCAGGGGATCCATTTCTATTACC
rJMFF036A09+ TTCTCCTCACTGCTGCTGCAAGAAGCTTATTGTCTGCCCAGGGGATCCATTTCTATTACC
rJMFF008P21+ TTCTCCTCACTGCTGCTGCAAGAAGCTTATTGTCTGCCCAGGGGATCCATTTCTATTACC
rJMFF041C14+ TTCTCCTCACTGCTGCTGCAAGAAGCTTATTGTCTGCCCAGGGGATCCATTTCTATTACC
____________________________________________________________
consensus TTCTCCTCACTGCTGCTGCAAGAAGCTTATTGTCTGCCCAGGGGATCCATTTCTATTACC
. : . : . : . : . : . :
rJMSF049J01+ TTCTGTTCCAAGGTTTAACTTTCCTTGTTGTGGGATTGGATTTGATTGGGGAACAAGTGA
rJMFF012L06+ TTCTGTTCCAAGGTTTAACTTTCCTTGTTGTGGGATTGGATTTGATTGGGGAACAAGTGA
rJMFF036A09+ TTCTGTTCCAAGGTTTAACTTTCCTTGTTGTGGGATTGGATTTGATTGGGGAACAAGTGA
rJMFF008P21+ TTCTGTTCCAAGGTTTAACTTTCCTTGTTGTGGGATTGGATTTGATTGGGGAACAAGTGA
rJMFF041C14+ TTCTGTTCCAAGGTTTAACTTTCCTTGTTGTGGGATTGGATTTGATTGGGGAACAAGTGA
____________________________________________________________
consensus TTCTGTTCCAAGGTTTAACTTTCCTTGTTGTGGGATTGGATTTGATTGGGGAACAAGTGA
. : . : . : . : . : . :
rJMSF049J01+ GCTAAAGATACGAACAGAAAGAAGGATGGCCTGTTTAATTTGGTCCATCTTTTTTGCTTC
rJMFF012L06+ GCTAAAGATACAAACAGGAAGAAGGATGGCCTGTTTAATTTGGTCCATCTTTTTTGCTTC
rJMFF036A09+ GCTAAAGATACAAACAGGAAGAAGGATGGCCTGTTTAATTTGGTCCATCTTTTTTGCTTC
rJMFF008P21+ GCTAAAGATACAAACAGAAAGAAGGATGGCCTGTTTAATTTGGTCCATCTTTTTTGCTTC
rJMFF041C14+ GCTAAAGATACAAACAGAAAGAAGGATGGCCTGTTTAATTTGGTCCATCTTTTTTGCTTC
____________________________________________________________
consensus GCTAAAGATACAAACAGAAAGAAGGATGGCCTGTTTAATTTGGTCCATCTTTTTTGCTTC
. : . : . : . : . : . :
rJMSF049J01+ TTCTTCTTCCTTTTTCTTTTTTGGAGTATTGTGTTACAGCCAGCTGAATAGCAGATAGCT
rJMFF012L06+ TTCTTCTTCCTTTTTCTTTTTTGGAGTATTGTGTTACAGCCAGCTGAATAGCAGATAGCT
rJMFF036A09+ TTCTTCTTCCTTTTTCTTTTTTGGAGTATTGTGTTACAGCCAGCTGAATAGCAGATAGCT
rJMFF008P21+ TTCTTCTTCCTTTTTCTTTTTTGGAGTATTGTGTTACAGCCAGCTGAATAGCAGATAGCT
rJMFF041C14+ TTCTTCTTCCTTTTTCTTTTTTGGAGTATTGTGTTACAGCCAGCTGAATAGCAGATAGCT
____________________________________________________________
consensus TTCTTCTTCCTTTTTCTTTTTTGGAGTATTGTGTTACAGCCAGCTGAATAGCAGATAGCT
. : . : . : . : . : . :
rJMSF049J01+ TTACAGGACAACTCAAACAAAGTAGCATACTTATATTCTTTTCTTAAATTTATTTTTCAT
rJMFF012L06+ TTACAGGACAACTCAAACAAAGTAGCATACTTATATTCTTTTCTTAAATTTATTTTTCAT
rJMFF036A09+ TTACAGGACAACTCAAACAAAGTAGCATACTTATATTCTTTTCTTAAATTTATTTTTCAT
rJMFF008P21+ TTACAGGACAACTCAAACAAAGTAGCATACTTATATTCTTTTCTTAAATTTATTTTTCAT
rJMFF041C14+ TTACAGGACAACTCAAACAAAGTAGCATACTTATATTCTTTTCTTAAATTTATTTTTCAT
____________________________________________________________
consensus TTACAGGACAACTCAAACAAAGTAGCATACTTATATTCTTTTCTTAAATTTATTTTTCAT
. : . : . : . : . : . :
rJMSF049J01+ CTGTGTAA
rJMFF012L06+ CTGTGTAATTACAAGTACCTCCACTATTCTTAATAA
rJMFF036A09+ CTGTGTAATTACAAGTACCTCCACTATTCTTAATAA
rJMFF008P21+ CTGTGTAATTACAAGTACCTCCACTATTCTTAATAA
rJMFF041C14+ CTGTGTAATTACAAGTACCTCCACTATTCTTAATAATGAATCAATGCAAGTGTTTCAAGT
____________________________________________________________
consensus CTGTGTAATTACAAGTACCTCCACTATTCTTAATAATGAATCAATGCAAGTGTTTCAAGT