Contig 009757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040K18Sequence620009757 (2)gb|EYU43272.1|7e-15hypothetical protein MIMGU_mgv1a005817mg [Erythranthe guttata]839009757 (2)emb|CBI30851.3|8e-95unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-                              CATCTTCAATTCAACTAGCTAGCTGAGTACTACTGAACATT
                      ____________________________________________________________
consensus                                CATCTTCAATTCAACTAGCTAGCTGAGTACTACTGAACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           ATGGCATCTTCAAAAAGTGTTTGCATGGCGGCTTTCATGCTTCTACTAATTTCATCATCC
                      ____________________________________________________________
consensus             ATGGCATCTTCAAAAAGTGTTTGCATGGCGGCTTTCATGCTTCTACTAATTTCATCATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           CTTATTAGCTCAGCCCTAAGTCGACCCCCTCCCACATTAAATGCCCATCATTTCAATCTC
                      ____________________________________________________________
consensus             CTTATTAGCTCAGCCCTAAGTCGACCCCCTCCCACATTAAATGCCCATCATTTCAATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           CATCCTTCAAGTAGTTTGGGTGAAGGAGTTGTTGATACTAAAAGTGATGAGCCTTTACAT
                      ____________________________________________________________
consensus             CATCCTTCAAGTAGTTTGGGTGAAGGAGTTGTTGATACTAAAAGTGATGAGCCTTTACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           TCCCCCCTAAAGGGTGGGGAAGGAAACATGAAAGGAAGAAATGAAGGGAGCAGTGATGAA
                      ____________________________________________________________
consensus             TCCCCCCTAAAGGGTGGGGAAGGAAACATGAAAGGAAGAAATGAAGGGAGCAGTGATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           GATATGGTTGGTAACAATGATGAATATGACAGTGATGAAGATATGGTTGGTAACAGTGAT
                      ____________________________________________________________
consensus             GATATGGTTGGTAACAATGATGAATATGACAGTGATGAAGATATGGTTGGTAACAGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           GAAGATATTGTTTATGACAATGACAA-GGACGACGACATAAAAAACGGTGATGAAGATAT
rJMFF040K18+          GAAGATATTGTTTATGACAATGACAAGGGACGACGACATAAAAAACGGTGATGAAGATAT
                      ____________________________________________________________
consensus             GAAGATATTGTTTATGACAATGACAAGGGACGACGACATAAAAAACGGTGATGAAGATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           GGTTGGTAACAACAACGAAGATATTGTTTATGACAATGACAAGGACGACGACATAAAAAG
rJMFF040K18+          GGTTGGTANCANCAACGAAGATATTGTTTATGACAATGACAAGGACGACGACATAAAAAG
                      ____________________________________________________________
consensus             GGTTGGTAACAACAACGAAGATATTGTTTATGACAATGACAAGGACGACGACATAAAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           CAAATGAGTGCAGTAACTTGCGATGCTTATCACATGACTGATCCTAGAGCTGATGGGACT
rJMFF040K18+          CAAATGAGTGCAGTAACTTGCGATGCTTATCACATGACTGATCCTAGAGCTGAT-GGACT
                      ____________________________________________________________
consensus             CAAATGAGTGCAGTAACTTGCGATGCTTATCACATGACTGATCCTAGAGCTGATGGGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           TGGTGTTTCTTCATGTATCCATAGTGCTCTTGAAGATGCTGGTGTATCACCTGAAGAGGT
rJMFF040K18+          TGGTGTTTCTTCATGTATCCATAGTGCTCTTGAAGATGCTGGTGTATCACCTGAAGAGGT
                      ____________________________________________________________
consensus             TGGTGTTTCTTCATGTATCCATAGTGCTCTTGAAGATGCTGGTGTATCACCTGAAGAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040K18-           GAACTACATAAATGCTCATGCAACTTCGACTCTAGTCGGA                    
rJMFF040K18+          GAACTACATAAATGCTCATGCAACTTCGACTCTAGTCGGAGATTTAGCCGAGGTCAATGC
                      ____________________________________________________________
consensus             GAACTACATAAATGCTCATGCAACTTCGACTCTAGTCGGAGATTTAGCCGAGGTCAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          TGTTAAGAAGGTATTCAAGGACACTTCAGAGATCAAAATGAATGCTACCAAGTCCATGAT
                      ____________________________________________________________
consensus             TGTTAAGAAGGTATTCAAGGACACTTCAGAGATCAAAATGAATGCTACCAAGTCCATGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          CGGACACTGCCTGGGTGCTGCTGGTGGCCTGGAAGCTATTGCAACGGTGAAAGCCATTAC
                      ____________________________________________________________
consensus             CGGACACTGCCTGGGTGCTGCTGGTGGCCTGGAAGCTATTGCAACGGTGAAAGCCATTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          AACTGGGTGGCTACATCCTACAATTAACCAATTTAACCCCGAGCCCTCAGTGGAGTTTGA
                      ____________________________________________________________
consensus             AACTGGGTGGCTACATCCTACAATTAACCAATTTAACCCCGAGCCCTCAGTGGAGTTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          CACAGTCCCAAACAAGAAACAGGAGCATGAAATCAATGTTGCCATTTCAAATTCATTTGG
                      ____________________________________________________________
consensus             CACAGTCCCAAACAAGAAACAGGAGCATGAAATCAATGTTGCCATTTCAAATTCATTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          CTTTGGTGGACACAACTCGGTCGTAGCCTTCTCTGCATTCAAGCCTTGATTGTTTTAGCA
                      ____________________________________________________________
consensus             CTTTGGTGGACACAACTCGGTCGTAGCCTTCTCTGCATTCAAGCCTTGATTGTTTTAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          AACTAGCAGCCTTACACACACTGGAGACCTAACCAAAATCTCGCATAGAGGCATCTTCTT
                      ____________________________________________________________
consensus             AACTAGCAGCCTTACACACACTGGAGACCTAACCAAAATCTCGCATAGAGGCATCTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          TTGCTCTGCAATTTGCTGCACGGGCAGAGGCACGGAGCTATGATTTGCTATTGTTGTTAC
                      ____________________________________________________________
consensus             TTGCTCTGCAATTTGCTGCACGGGCAGAGGCACGGAGCTATGATTTGCTATTGTTGTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          GTGTAATAATTTTGGGTTTTAGCTCTTCATTACAAGACATCTCCCATAATATTTTTGTTT
                      ____________________________________________________________
consensus             GTGTAATAATTTTGGGTTTTAGCTCTTCATTACAAGACATCTCCCATAATATTTTTGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040K18+          TTAGAATTTGCATTCTGGTAAGTAACTCTTTTGTTCTACGGGACCTTATAGCTATATAAT
                      ____________________________________________________________
consensus             TTAGAATTTGCATTCTGGTAAGTAACTCTTTTGTTCTACGGGACCTTATAGCTATATAAT