Contig 009752:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M24Sequence592009752 (9)emb|CAN69940.1|7e-105hypothetical protein VITISV_006128 [Vitis vinifera]752009752 (9)emb|CDO96854.1|2e-90unnamed protein product [Coffea canephora]
JMFF038J08Sequence501009752 (9)emb|CAN69940.1|1e-102hypothetical protein VITISV_006128 [Vitis vinifera]782009752 (9)emb|CDO96854.1|2e-90unnamed protein product [Coffea canephora]
JMSF009K11Sequence366007783 (5)ref|XP_009783189.1|2e-05PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri737009752 (9)emb|CDO96854.1|6e-97unnamed protein product [Coffea canephora]
JMSF021K10Sequence643007783 (5)ref|XP_009783189.1|9e-65PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri690009752 (9)emb|CDO96854.1|4e-97unnamed protein product [Coffea canephora]
JMSF024O13Sequence650007783 (5)ref|XP_009783189.1|5e-52PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri690009752 (9)emb|CDO96854.1|4e-97unnamed protein product [Coffea canephora]
JMSF027M03Sequence656007783 (5)ref|XP_009783189.1|4e-63PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri717009752 (9)emb|CAN69940.1|6e-107hypothetical protein VITISV_006128 [Vitis vinifera]
JMSF028A20Sequence668007783 (5)ref|XP_009783189.1|3e-74PREDICTED: uncharacterized protein LOC104231828 isoform X1 [Nicotiana sylvestri703009752 (9)emb|CDO96854.1|3e-94unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF038J08-                                                                     AA
                      ____________________________________________________________
consensus                                                                       AA
 
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JMFF038J08-           GGTCCTTTTCAACTTCCGTTATCAC-AATTCGTGCATACATAAAGGATCCTATCACTCCC
rJMSF027M03+               TTTTCAACTTCCGTTATCACAAATTCGTGCATACATAAAGGATCCTATCACTCCC
JMFF001M24-                TTTTCAACTTCCGTTATCAC-AATTCGTGCATACATAAAGGATCCTATCACTCCC
rJMSF024O13+                                                             ATCACTCCC
rJMSF021K10+                                                             ATCACTCCC
rJMSF009K11+                                                             ATCACTCCC
rJMFF038J08+                                                                    CC
                      ____________________________________________________________
consensus             GGTCCTTTTCAACTTCCGTTATCAC-AATTCGTGCATACATAAAGGATCCTATCACTCCC
 
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JMFF038J08-           AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMSF027M03+          AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
JMFF001M24-           AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMSF028A20+            GTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMSF024O13+          AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMSF021K10+          AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMSF009K11+          AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMFF001M24+                             TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
rJMFF038J08+          AGGTTTGTACACGTGGGGTTCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
                      ____________________________________________________________
consensus             AGGTTTGTACACGTGGGG-TCTGCAGGTGTTACTCGACCTGAAAGACCAGGACTAGATTT
 
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JMFF038J08-           GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMSF027M03+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
JMFF001M24-           GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMSF028A20+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMSF024O13+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMSF021K10+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMSF009K11+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMFF001M24+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
rJMFF038J08+          GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
                      ____________________________________________________________
consensus             GAGCAAACAGCCTCCTGCTGTGCGTTTGAACAAGGAATTGGGCTTCATCTTGACATTTAA
 
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JMFF038J08-           GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMSF027M03+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
JMFF001M24-           GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMSF028A20+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMSF024O13+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMSF021K10+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMSF009K11+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMFF001M24+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
rJMFF038J08+          GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
                      ____________________________________________________________
consensus             GCTAAAGGGAGAGGATTTGGTTAGGGAAAGTGGAATTCCATATACAATAGTGAGGCCTTG
 
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JMFF038J08-           TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMSF027M03+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
JMFF001M24-           TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMSF028A20+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMSF024O13+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMSF021K10+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMSF009K11+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMFF001M24+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
rJMFF038J08+          TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
                      ____________________________________________________________
consensus             TGCTTTGACTGAAGAACCCGCTGGAGCTGATCTCATTTTTGATCAAGGAGACAATATAAC
 
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JMFF038J08-           AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMSF027M03+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
JMFF001M24-           AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMSF028A20+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMSF024O13+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMSF021K10+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMSF009K11+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMFF001M24+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
rJMFF038J08+          AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
                      ____________________________________________________________
consensus             AGGAAAGATATCCAGGGAAGAAGTTGCTCGGATATGTGTGGCTGCTCTAGAAAGCCCATA
 
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JMFF038J08-           TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMSF027M03+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
JMFF001M24-           TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMSF028A20+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMSF024O13+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMSF021K10+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMSF009K11+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMFF001M24+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
rJMFF038J08+          TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
                      ____________________________________________________________
consensus             TGCATGTGACAAGACATTTGAGGTGAAGAGTGTTATTCCATTTAGCGAGCCATACACTGT
 
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JMFF038J08-           GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMSF027M03+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
JMFF001M24-           GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMSF028A20+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMSF024O13+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMSF021K10+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMSF009K11+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMFF001M24+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
rJMFF038J08+          GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
                      ____________________________________________________________
consensus             GGATCCTGAAAACCCCCCTCCAGAAAAAGATTATGATGTTTACTTCAAGACTCTGAAAGA
 
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JMFF038J08-           AGGCATCACTGGGAAAGAAAG                                       
rJMSF027M03+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAG   
JMFF001M24-           AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
rJMSF028A20+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAGCAAGATT
rJMSF024O13+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
rJMSF021K10+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
rJMSF009K11+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
rJMFF001M24+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
rJMFF038J08+          AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
                      ____________________________________________________________
consensus             AGGCATCACTGGGAAAGAAAGCCTCGAGCCAACCCCTGTTACTGCATAACGAACAAGATT
 
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JMFF001M24-           TTGTAGGGGTGAAATCTATACNAGAGTACAATTTTGAAACTTTGTGTTCCTT        
rJMSF028A20+          TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
rJMSF024O13+          TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
rJMSF021K10+          TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
rJMSF009K11+          TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
rJMFF001M24+          TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
rJMFF038J08+          TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
                      ____________________________________________________________
consensus             TTGTAGGGGTGAAATCTATACAAGAGTACAATTTTGAAACTTTGTGTTCCTTTTACCCAT
 
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rJMSF028A20+          CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
rJMSF024O13+          CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
rJMSF021K10+          CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
rJMSF009K11+          CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
rJMFF001M24+          CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
rJMFF038J08+          CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
                      ____________________________________________________________
consensus             CAGTGTAAATATATCTTGTCTGAGCTCTGTGGTGGATAGATTCTTCTCCGACGTGGAAAG
 
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rJMSF028A20+          CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
rJMSF024O13+          CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
rJMSF021K10+          CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
rJMSF009K11+          CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
rJMFF001M24+          CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
rJMFF038J08+          CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
                      ____________________________________________________________
consensus             CTCAAGGAAGGATCAAGGACGTGATGAAAAAGGTGACTTTATCAAACTAAGACAAAGTTC
 
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rJMSF028A20+          AATCCACGTAAAGATACACTTTTCACCTTCTAAAATAGAAATGTAT              
rJMSF024O13+          AATCCACGTAAAGATACACTTT                                      
rJMSF021K10+          AATCCACGTAAAGATACACTTT                                      
rJMSF009K11+          AATCCACGTAAAGATACACTTTTCACCTTCTAAAATAGAAATGTATTATATATATGTGAA
rJMFF001M24+          AATCCACGTAAAGATACACTTTTCACCTTCTAAAATAGAAATGTATTATATATATGTGAA
rJMFF038J08+          AATCCACGTAAAGATACACTTTTCACCTTCTAAAATAGAAATGTATTATATATATGTGAA
                      ____________________________________________________________
consensus             AATCCACGTAAAGATACACTTTTCACCTTCTAAAATAGAAATGTATTATATATATGTGAA
 
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rJMSF009K11+          TCCCT                                                       
rJMFF001M24+          TCCCTTATCTGATTTACAGTCTGCTTCCCTCTGTTGTTTACCATTAATGCT         
rJMFF038J08+          TCCCTTATCTGATTTACAGTCTGCTTCCCTCTGTTGTTTACCATTAATGCTACCACTAAA
                      ____________________________________________________________
consensus             TCCCTTATCTGATTTACAGTCTGCTTCCCTCTGTTGTTTACCATTAATGCTACCACTAAA