| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020O21 | Sequence | 304 | 007862 (3) | ref|XP_002282769.1| | 4e-05 | PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera] emb|CBI16887. | 702 | 009750 (3) | ref|XP_009631893.1| | 1e-95 | PREDICTED: proline dehydrogenase 2, mitochondrial [Nicotiana tomentosiformis] |
| JMFF038E14 | Sequence | 708 | 009750 (3) | ref|XP_009631893.1| | 1e-97 | PREDICTED: proline dehydrogenase 2, mitochondrial [Nicotiana tomentosiformis] | |||||
| JMSF020E13 | Sequence | 553 | 007862 (3) | ref|XP_009631893.1| | 3e-28 | PREDICTED: proline dehydrogenase 2, mitochondrial [Nicotiana tomentosiformis] | 772 | 009750 (3) | ref|XP_009611325.1| | 1e-116 | PREDICTED: proline dehydrogenase 2, mitochondrial-like [Nicotiana tomentosiform |
This contig is upended
. : . : . : . : . : . :
rJMSF020E13+ GCGGGGGTTCCATTGTNGNTGATGCAGAGGACACCACG
____________________________________________________________
consensus GCGGGGGTTCCATTGTNGNTGATGCAGAGGACACCACG
. : . : . : . : . : . :
rJMSF020E13+ GTTCAACCTGCGATTGATTACATGACCTATTCTGCAGCGGTTTCGTACTATAAAGACGAC
____________________________________________________________
consensus GTTCAACCTGCGATTGATTACATGACCTATTCTGCAGCGGTTTCGTACTATAAAGACGAC
. : . : . : . : . : . :
rJMSF020E13+ GGTCCTCTGGTGTTCGGGACAGTTCAGGCGTACTTGAAGGACGCCAAAGAGAGATTGGTG
rJMFF020O21+ GGACAGTTCAGGCGTACTTGAAGGACGCCAAAGAGAGATTGGTG
rJMFF038E14+ GGACAGTTCAGGCGTACTTGAAGGACGCCAAAGAGAGATTGGTG
____________________________________________________________
consensus GGTCCTCTGGTGTTCGGGACAGTTCAGGCGTACTTGAAGGACGCCAAAGAGAGATTGGTG
. : . : . : . : . : . :
rJMSF020E13+ GCGGTGAAAATGGCGGCGGGGAAGATGGGGATTCCCATAGGGTTTAAGCTGGTGAGGGGC
rJMFF020O21+ GCGGTGAAAATGGCGGCGGGGAAGATGGGGATTCCCATAGGGTTTAAGCTGGTGAGGGGC
rJMFF038E14+ GCGGTGAAAATGGCGGCGGGGAAGATGGGGATTCCCATAGGGTTTAAGCTGGTGAGGGGC
____________________________________________________________
consensus GCGGTGAAAATGGCGGCGGGGAAGATGGGGATTCCCATAGGGTTTAAGCTGGTGAGGGGC
. : . : . : . : . : . :
rJMSF020E13+ GCTTATATGACGAGTGAGAGTGGGTTGGCTTCAGCTTTGGGGGCTGGATCTCCGATTCAT
rJMFF020O21+ GCTTATATGACGAGTGAGAGTGGGTTGGCTTCAGCTTTGGGGGCTGGATCTCCGATTCAT
rJMFF038E14+ GCTTATATGACGAGTGAGAGTGGGTTGGCTTCAGCTTTGGGGGCTGGATCTCCGATTCAT
____________________________________________________________
consensus GCTTATATGACGAGTGAGAGTGGGTTGGCTTCAGCTTTGGGGGCTGGATCTCCGATTCAT
. : . : . : . : . : . :
rJMSF020E13+ GACACCATTCATAACACTCACAAATGTTACAATGATTGCGCTTCTTTCATGCTCGAGGAG
rJMFF020O21+ GACACCATTCATAACACTCACAAATGTTACAATGATTGCGCTTCTTTCATGCTCGAGGAG
rJMFF038E14+ GACACCATTCATAACACTCACAAATGTTACAATGATTGCGCTTCTTTCATGCTCGAGGAG
____________________________________________________________
consensus GACACCATTCATAACACTCACAAATGTTACAATGATTGCGCTTCTTTCATGCTCGAGGAG
. : . : . : . : . : . :
rJMSF020E13+ ATTGCGGCTGGCTCTGGAGCAGTTGTTATTGCTACCCACAATATTGAATCTGGGAAGCTA
rJMFF020O21+ ATTGCGGCTGGCTCTGGAGCAGTTGTTATTGCTACCCACAATATTGAATCTGGGAAGCTA
rJMFF038E14+ ATTGCGGCTGGCTCTGGAGCAGTTGTTATTGCTACCCACAATATTGAATCTGGGAAGCTA
____________________________________________________________
consensus ATTGCGGCTGGCTCTGGAGCAGTTGTTATTGCTACCCACAATATTGAATCTGGGAAGCTA
. : . : . : . : . : . :
rJMSF020E13+ GCTGCAACTAAGGCAATAGATTTGGGGATCAAAAGGGACAATCAAAAGCTCCAATTCGCA
rJMFF020O21+ GCTGCAACTAAGGCAATAGATTTGGGGATCAAAAGGGACAATCAAAAGCTCCAATTCGCA
rJMFF038E14+ GCTGCAACTAAGGCAATAGATTTGGGGATCAAAAGGGACAATCAAAAGCTCCAATTCGCA
____________________________________________________________
consensus GCTGCAACTAAGGCAATAGATTTGGGGATCAAAAGGGACAATCAAAAGCTCCAATTCGCA
. : . : . : . : . : . :
rJMSF020E13+ CAGCTATATGGAATGTCAGAAGGTTTATCCTTTGGTTTGAAAAAAGCAGGGTTTCAGGTT
rJMFF020O21+ CAGCTATATGGAATGTCAGAAGGTTTATCCTTTGGTTTGAAAAAAGCAGGGTTTCAGGTT
rJMFF038E14+ CAGCTATATGGAATGTCAGAAGGTTTATCCTTTGGTTTGAAAAAAGCAGGGTTTCAGGTT
____________________________________________________________
consensus CAGCTATATGGAATGTCAGAAGGTTTATCCTTTGGTTTGAAAAAAGCAGGGTTTCAGGTT
. : . : . : . : . : . :
rJMSF020E13+ AGCAAGTATTTGCCATTTGGACCTGTGGACCAGATCATGCCTTATCTTCTGAGGAGAGCT
rJMFF020O21+ AGCAAGTATTTGCCATTTGGACCTGTGGACCAGATCATGCCTTATCTTNTGAGGAGAGCT
rJMFF038E14+ AGCAAGTATTTGCCATTTGGACCTGTGGACCAGATCATGCCTTATCTTCTGAGGAGAGCT
____________________________________________________________
consensus AGCAAGTATTTGCCATTTGGACCTGTGGACCAGATCATGCCTTATCTTCTGAGGAGAGCT
. : . : . : . : . : . :
rJMSF020E13+ GAAGAAAACCGAGGGCTTTTATCAGCTTCATCTCTCGACAGACAACTCATGAGGAAGGAG
rJMFF020O21+ GAAGAAAACCGAGGGCTTTTATCAGCTTCATCTCTCGACAGACAACTCATGAGGAAGGAG
rJMFF038E14+ GAAGAAAACCGAGGGCTTTTATCAGCTTCATCTCTCGACAGACAACTCATGAGGAAGGAG
____________________________________________________________
consensus GAAGAAAACCGAGGGCTTTTATCAGCTTCATCTCTCGACAGACAACTCATGAGGAAGGAG
. : . : . : . : . : . :
rJMSF020E13+ CTGAAAAGAAGGCTGGCATCAATTATTCTTTAGCAGAGACAAGATTCCTAGGCCAGCCAC
rJMFF020O21+ CTGAAAAGAAGGCTGGCATCAATTATTCTTTAGCAGAGACAAGATTCCTAGGCCAGCCAC
rJMFF038E14+ CTGAAAAGAAGGCTGGCATCAATTATTCTTTAGCAGAGACAAGATTCCTAGGCCAGCCAC
____________________________________________________________
consensus CTGAAAAGAAGGCTGGCATCAATTATTCTTTAGCAGAGACAAGATTCCTAGGCCAGCCAC
. : . : . : . : . : . :
rJMSF020E13+ AATCAGTCTTGATCATTAGTGGTTATGTAACTACTAGTTATTGATCGCCCATTGCGCGTT
rJMFF020O21+ AATCAGTCTTGATCATTAGTGGTTATGTAACTACTAGTTATTGATCGCCCATTGCGCGTT
rJMFF038E14+ AATCAGTCTTGATCATTAGTGGTTATGTAACTACTAGTTATTGATCGCCCATTGCGCGTT
____________________________________________________________
consensus AATCAGTCTTGATCATTAGTGGTTATGTAACTACTAGTTATTGATCGCCCATTGCGCGTT
. : . : . : . : . : . :
rJMSF020E13+ TAATGTCCCACGTG
rJMFF020O21+ TAATGTCCCACGTGTATTATTAAATTAGTATTTCAGAATTTATTAAAATATTAATCGA
rJMFF038E14+ TAATGTCCCACGTGTATTATTAAATTAGTATTTCAGAATTTATTAAAATATTAATCGATT
____________________________________________________________
consensus TAATGTCCCACGTGTATTATTAAATTAGTATTTCAGAATTTATTAAAATATTAATCGATT