| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP015A02 | Sequence | 586 | 009743 (6) | ref|XP_009773188.1| | 5e-72 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris] | |||||
| JMFF030P14 | Sequence | 433 | 009743 (6) | ref|XP_009773188.1| | 1e-41 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris] | 715 | 009743 (6) | ref|XP_009773188.1| | 5e-85 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris] |
| JMFF036F24 | Sequence | 535 | 009743 (6) | ref|XP_009773188.1| | 7e-62 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris] | 667 | 009743 (6) | ref|XP_009588605.1| | 1e-77 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana tomentosiformis] |
| JMFF037G01 | Sequence | 716 | 009743 (6) | ref|XP_009773188.1| | 6e-85 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF036F24- ACCATCACCGC
JMFF030P14- ACCATCACCGC
rJMCP015A02- ACCATCACCGC
____________________________________________________________
consensus ACCATCACCGC
. : . : . : . : . : . :
JMFF036F24- CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
JMFF030P14- CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
rJMCP015A02- CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
____________________________________________________________
consensus CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
. : . : . : . : . : . :
JMFF036F24- AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
JMFF030P14- AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
rJMCP015A02- AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
____________________________________________________________
consensus AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
. : . : . : . : . : . :
JMFF036F24- TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
JMFF030P14- TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
rJMCP015A02- TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
____________________________________________________________
consensus TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
. : . : . : . : . : . :
JMFF036F24- GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
JMFF030P14- GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMCP015A02- GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMFF030P14+ TGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMFF037G01+ TGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMFF036F24+ CCCAAGT
____________________________________________________________
consensus GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
. : . : . : . : . : . :
JMFF036F24- GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
JMFF030P14- GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMCP015A02- GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMFF030P14+ GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMFF037G01+ GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMFF036F24+ GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
____________________________________________________________
consensus GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
. : . : . : . : . : . :
JMFF036F24- CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
JMFF030P14- CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMCP015A02- CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMFF030P14+ CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMFF037G01+ CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMFF036F24+ CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
____________________________________________________________
consensus CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
. : . : . : . : . : . :
JMFF036F24- GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
JMFF030P14- GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMCP015A02- GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMFF030P14+ GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMFF037G01+ GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMFF036F24+ GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
____________________________________________________________
consensus GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
. : . : . : . : . : . :
JMFF036F24- GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
JMFF030P14- GA
rJMCP015A02- GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
rJMFF030P14+ GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
rJMFF037G01+ GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
rJMFF036F24+ GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
____________________________________________________________
consensus GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
. : . : . : . : . : . :
JMFF036F24- GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGG
rJMCP015A02- GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
rJMFF030P14+ GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
rJMFF037G01+ GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
rJMFF036F24+ GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
____________________________________________________________
consensus GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
. : . : . : . : . : . :
rJMCP015A02- TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTG
rJMFF030P14+ TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
rJMFF037G01+ TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
rJMFF036F24+ TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
____________________________________________________________
consensus TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
. : . : . : . : . : . :
rJMFF030P14+ GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
rJMFF037G01+ GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
rJMFF036F24+ GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
____________________________________________________________
consensus GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
. : . : . : . : . : . :
rJMFF030P14+ TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
rJMFF037G01+ TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
rJMFF036F24+ TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
____________________________________________________________
consensus TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
. : . : . : . : . : . :
rJMFF030P14+ TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
rJMFF037G01+ TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
rJMFF036F24+ TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
____________________________________________________________
consensus TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
. : . : . : . : . : . :
rJMFF030P14+ GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
rJMFF037G01+ GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
rJMFF036F24+ GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
____________________________________________________________
consensus GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
. : . : . : . : . : . :
rJMFF030P14+ ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTA
rJMFF037G01+ ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTA
rJMFF036F24+ ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTATCT
____________________________________________________________
consensus ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTATCT