Contig 009742:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023I03Sequence398005970 (3)gb|AAB07724.1|2e-34Pn47p [Ipomoea nil]747009742 (3)gb|AAB07724.1|5e-46Pn47p [Ipomoea nil]
JMFF023I23Sequence377005970 (3)gb|AAB07724.1|6e-32Pn47p [Ipomoea nil]693009742 (3)ref|XP_009601720.1|3e-41PREDICTED: phospholipase A1-II 1-like [Nicotiana tomentosiformis]
JMFF036C16Sequence487005970 (3)gb|AAB07724.1|4e-54Pn47p [Ipomoea nil]686009742 (3)ref|XP_009601720.1|3e-38PREDICTED: phospholipase A1-II 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+                                GCANCACTAAATGCAGTTGACCTAGCTGCCAATCCATT
                      ____________________________________________________________
consensus                                   GCANCACTAAATGCAGTTGACCTAGCTGCCAATCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          CAACAACACCGATGTTCTTATCACAGCATTCTTGTTCGCAAGCCCCAAAGTGGGAAACGG
rJMFF023I23+                              TCACAGCATTTTTGTTCGCAAGCCCCAAAGTGGGAAACGA
rJMFF036C16+                                            TTCGCAAGCCCCAAAGTGGGAAACGA
                      ____________________________________________________________
consensus             CAACAACACCGATGTTCTTATCACAGCATTTTTGTTCGCAAGCCCCAAAGTGGGAAACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          GGGTTTCAAGAAGGCTTTTTCCCACCTGAAAAACCTCCGAGCTCTTCGAGTCGTTAACAA
rJMFF023I23+          GGGTTTCAAGAAGGCTTTTTCCCACCTGAAAAACCTCCGAGCTCTTCGAGTCGTTAACAA
rJMFF036C16+          GGNTTTCAAGAAGGCTTTTTCCCACCTGAAAAACCTCCGAGCTCTTCGAGTCGTTAACAA
                      ____________________________________________________________
consensus             GGGTTTCAAGAAGGCTTTTTCCCACCTGAAAAACCTCCGAGCTCTTCGAGTCGTTAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          TGGGGATCTTGTGCCAATGGTGCCATTCTTGGCTGTTGAAGCCGGGACTATTTTACCCCT
rJMFF023I23+          TGGGGATCTTGTGCCAATGGTGCCATTCTTGGCTGTTGAAGCCGGGACTATTTTACCCCT
rJMFF036C16+          TGGGGATCTTGTGCCAATGGTGCCATTCTTGGCTGTTGAAGCCGGGACTATTTTACCCCT
                      ____________________________________________________________
consensus             TGGGGATCTTGTGCCAATGGTGCCATTCTTGGCTGTTGAAGCCGGGACTATTTTACCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          CATAGCCTACAAAGACGTGGGAGTCCAATTTGATATAAACGCTTCAAAATCAGAGTATGT
rJMFF023I23+          CATAGCCTACAAAGACGTGGGAGTCCAATTTGATATAAACGCTTCAAAATCAGAGTATGT
rJMFF036C16+          CATAGCCTACAAAGACGTGGGAGTCCAATTTGATATAAACGCTTCAAAATCAGAGTATGT
                      ____________________________________________________________
consensus             CATAGCCTACAAAGACGTGGGAGTCCAATTTGATATAAACGCTTCAAAATCAGAGTATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          AAAGCATGATAAGTTGAACGTGTTAATGTGGCATGGGCTGATGATTTATCTGCATGGAAT
rJMFF023I23+          AAAGCATGATAAGTTGAACGTGTTAATGTGGCATGGGCTGATGATTTATCTGCATGGAAT
rJMFF036C16+          AAAGCATGATAAGTTGAACGTGTTAATGTGGCATGGGCTGATGATTTATCTGCATGGAAT
                      ____________________________________________________________
consensus             AAAGCATGATAAGTTGAACGTGTTAATGTGGCATGGGCTGATGATTTATCTGCATGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          CGATGGGTTTCAAGGACCGAAGGGAGAGTTTAAACCACAAGGGTGTTTTGGTATCCCTCA
rJMFF023I23+          CGATGGGTTTCAAGGACCGAAGGGAGAGTTTAAACCACAAGGGTGTTTTGATATCCCTCA
rJMFF036C16+          CGATGGGTTTCAAGGACCGAAGGGAGAGTTTAAACCACAAGGGTGTTTTGATATCCCTCA
                      ____________________________________________________________
consensus             CGATGGGTTTCAAGGACCGAAGGGAGAGTTTAAACCACAAGGGTGTTTTGATATCCCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          AGTCAACAAGTATGGAGGCATGCTGAAAGCTGAGAAATGCCCGGTTCCAACTGAATGGTG
rJMFF023I23+          AGTCAACAAGTATGGAGGCATGCTGAAAGTTGAGAAATGCCCGGTTCCAACTGAATGGTG
rJMFF036C16+          AGTCAACAAGTATGGAGGCATGCTGAAAGTTGAGAAATGCCCGGTTCCAACTGAATGGTG
                      ____________________________________________________________
consensus             AGTCAACAAGTATGGAGGCATGCTGAAAGTTGAGAAATGCCCGGTTCCAACTGAATGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          GGTCGAGAAGAACAAAGGAATGGTTCAGCAAGATGACGGTACCTGGATTCTTGATGATCA
rJMFF023I23+          GGTCGAGAAGAACAAAGGAATGGTTCAGCAAGATGACGGTACCTGGATTCTTGATGATCA
rJMFF036C16+          GGTCGAGAAGAACAAAGGAATGGTTCAGCAAGATGACGGTACCTGGATTCTTGATGATCA
                      ____________________________________________________________
consensus             GGTCGAGAAGAACAAAGGAATGGTTCAGCAAGATGACGGTACCTGGATTCTTGATGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          CGAGGCAGACCATGTTGTGTTCGCATAAATTAAACCCTTTCATGGTGGGATACTATTGAT
rJMFF023I23+          CGAGGCAGACCATGTTGTGTTCGCATAAATTAAACCCTTTCATGGTGGGATACTATTGAT
rJMFF036C16+          CGAGGCAGACCATGTTGTGTTCGCATAAATTAAACCCTTTCATGGTGGGATACTATTGAT
                      ____________________________________________________________
consensus             CGAGGCAGACCATGTTGTGTTCGCATAAATTAAACCCTTTCATGGTGGGATACTATTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          ATGATTTTAATAAGGTATGAATAAAGTTTGTTTGTGTGTTAGTTGTTTAAGCAAGGGAAC
rJMFF023I23+          ATGATTTTAATAAGGTATGAATAAAGTTTGTTTGTGTGTTAGTTGTTTAAGCAAGGGAAC
rJMFF036C16+          ATGATTTTAATAAGGTATGAATAAAGTTTGTTTGTGTGTTAGTTGTTTAAGCAAGGGAAC
                      ____________________________________________________________
consensus             ATGATTTTAATAAGGTATGAATAAAGTTTGTTTGTGTGTTAGTTGTTTAAGCAAGGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          TATAATGTCACATATATGTTGTTCATCATCTACGTTGTGCGTGTAGAGTTGCCTTTCCTG
rJMFF023I23+          TATAATGTCACATATATGTTGTTCATCATCTACGTTGTGCGTGTAGAGTTGCCTTTCCTG
rJMFF036C16+          TATAATGTCACATATATGTTGTTCATCATCTACGTTGTGCGTGTAGAGTTGCCTTTCCTG
                      ____________________________________________________________
consensus             TATAATGTCACATATATGTTGTTCATCATCTACGTTGTGCGTGTAGAGTTGCCTTTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023I03+          TTTTCCAACGCCATTATTGGCGAACTTAATTGCATTGTACTGCTTTGTG           
rJMFF023I23+          TTTTCCAACGCCATTATTGGCGAACTTAATTGCATTGTACTGCTTTGTG           
rJMFF036C16+          TTTTCCAACGCCATTATTGGCGAACTTAATTGCATTGTACTGCTTTGTGTATGTGAATAA
                      ____________________________________________________________
consensus             TTTTCCAACGCCATTATTGGCGAACTTAATTGCATTGTACTGCTTTGTGTATGTGAATAA